Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,364,798 |
C→T |
G82D (GGC→GAC) |
dsbD ← |
thiol:disulfide interchange protein and activator of DsbC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,364,798 | 0 | C | T | 97.0%
| 1481.4
/ 21.1
| 447 | G82D (GGC→GAC) | dsbD | thiol:disulfide interchange protein and activator of DsbC |
| Reads supporting (aligned to +/- strand): ref base C (6/7); new base T (216/212); total (226/221) |
| Fisher's exact test for biased strand distribution p-value = 7.86e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.09e-01 |
Only 100 of 447 total aligned reads displayed.
TGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCG > NC_000913/4364650‑4364945
|
ggCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCtt < 8:1255054/151‑1 (MQ=255)
ggATAACAGAAACCGGCATCAGCAGAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCg < 5:1283018/151‑1 (MQ=255)
ggATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCg > 1:378184/1‑151 (MQ=255)
aTAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGc > 5:1377899/1‑151 (MQ=255)
aaCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCa < 5:773982/150‑1 (MQ=255)
cAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCt > 7:1511235/1‑151 (MQ=255)
aCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGATGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGTCAGCTGCa > 4:1202944/1‑149 (MQ=255)
cGGCATCAGCACAGCCGTGGTAGGTGACAGTTTACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGGGGTAAATCTCGCTTTTGCGGTAATACTCATCTTCATGCCAGACGTCTTGGGGCGGCTGCACGtg > 1:1217792/1‑150 (MQ=255)
ggCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCg < 2:1471126/151‑1 (MQ=255)
gCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCgg < 6:246506/151‑1 (MQ=255)
gCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCgg < 5:293994/151‑1 (MQ=255)
aTCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGc > 4:435870/1‑150 (MQ=255)
aTCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGc > 1:300448/1‑150 (MQ=255)
aTCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCa < 6:903726/151‑1 (MQ=255)
gCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCTAttt > 1:1161945/1‑151 (MQ=255)
cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAAtttt > 5:420406/1‑151 (MQ=255)
cgCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTcgc < 6:788785/150‑1 (MQ=255)
gCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTcgcg < 8:707147/151‑1 (MQ=255)
cccTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCgt > 4:185313/1‑151 (MQ=255)
ccTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCgtg > 1:1665198/1‑151 (MQ=255)
ccTGGTAGGTGACAGTTAACATCGCTCCCGCTCTCGCCTGGTTGATGGTGAGGGGAAGCGTCAGCCGATCTCGGTAACTCTCGCTTTTGCCGTAAAACTCATCTTCATGCGAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCgtg < 8:243131/151‑1 (MQ=255)
tGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGtt > 7:1577942/1‑151 (MQ=255)
gggTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGtt < 7:65427/150‑1 (MQ=255)
ggTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCgtgt < 2:911650/149‑1 (MQ=255)
ggTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGtt < 4:28913/150‑1 (MQ=255)
ggTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGtt < 6:1051537/150‑1 (MQ=255)
gTAGGTGACAGTTAACGTCGCTCCCGCATTCGCCTGGTTGATGGTGAGGGGTAGCGTGAGCCGATCGCGGTATATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTcc < 2:800366/151‑1 (MQ=255)
gTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGTCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTcc > 4:1614400/1‑151 (MQ=255)
aGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCgg < 3:528098/151‑1 (MQ=255)
aGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCgg < 3:1585640/151‑1 (MQ=255)
ggcgACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGc < 2:609812/148‑1 (MQ=255)
gACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGt < 4:343053/150‑1 (MQ=255)
gTTCACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGGCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGc < 6:1303959/151‑1 (MQ=255)
aaCGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCgg < 2:1285035/150‑1 (MQ=255)
cGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGAtg > 1:456439/1‑150 (MQ=255)
gTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCt > 6:1155252/1‑151 (MQ=255)
cTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGttt > 5:1171947/1‑151 (MQ=255)
tCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGttt > 7:928512/1‑150 (MQ=255)
cccGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGttt < 1:146023/149‑1 (MQ=255)
cccGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTa < 6:456286/150‑1 (MQ=255)
cccGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTa < 5:1576497/150‑1 (MQ=255)
gCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGt < 5:1535507/151‑1 (MQ=255)
cACTCGCCTGGTTGTTGGTGACGGGAAGCGTAAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAAGTCATCTTCTTGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTa < 4:145348/151‑1 (MQ=255)
ccTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGgt > 5:362535/1‑150 (MQ=255)
ggTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGgtagt > 6:718682/1‑150 (MQ=255)
ggTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGgtagt < 7:432798/150‑1 (MQ=255)
ttGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAAc > 7:277229/1‑151 (MQ=255)
tGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAAc < 3:1441960/150‑1 (MQ=255)
gATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCg < 5:179241/151‑1 (MQ=255)
aTGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGt > 2:1330726/1‑151 (MQ=255)
ggTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCt < 4:1067221/151‑1 (MQ=255)
ggTGACGGGAAGCGTCAGCCGATCGATGTAAATCTCTCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAAACGTCt < 1:1559258/151‑1 (MQ=255)
gACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTg < 8:41887/151‑1 (MQ=255)
cGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGAt < 1:17912/151‑1 (MQ=255)
cGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGAt > 8:844141/1‑151 (MQ=255)
gAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTg > 5:1021927/1‑151 (MQ=255)
aGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGcc > 2:1037859/1‑151 (MQ=255)
aGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGcc > 6:1521407/1‑151 (MQ=255)
cGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGcc > 4:1394997/1‑149 (MQ=255)
ccGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTc > 3:959075/1‑148 (MQ=255)
cGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGAt < 5:655280/151‑1 (MQ=255)
gATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGAtt > 2:746357/1‑151 (MQ=255)
aTCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTa < 2:826663/151‑1 (MQ=255)
aTCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCAAGGTCAGAtt > 6:169451/1‑150 (MQ=255)
ggcgTTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAg < 5:823748/150‑1 (MQ=255)
cgcgGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTATTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTaa < 4:1520591/150‑1 (MQ=255)
cgGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGt > 7:1068436/1‑151 (MQ=255)
cgGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGt > 8:1343728/1‑151 (MQ=255)
cgGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGt < 8:1054402/151‑1 (MQ=255)
aaaTCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCAt < 4:84927/150‑1 (MQ=255)
aaTCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGt > 3:1080948/1‑151 (MQ=255)
ctcGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTgg > 8:1585572/1‑151 (MQ=255)
cGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGtt < 5:1652580/151‑1 (MQ=255)
tttGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTg < 3:808824/150‑1 (MQ=255)
tttGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTg < 3:1167204/150‑1 (MQ=255)
ttGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCt > 3:20017/1‑151 (MQ=255)
gCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTg > 7:1170519/1‑150 (MQ=255)
gCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTg < 3:70040/150‑1 (MQ=255)
ccGTAAACCTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCTGCGTAATGCGGATCTCTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGaa < 6:548534/151‑1 (MQ=255)
ccGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGaa < 2:319185/151‑1 (MQ=255)
ccGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGa > 1:831703/1‑150 (MQ=255)
cGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGaa > 7:1320220/1‑150 (MQ=255)
aaaaCTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTCGTTTTGCTGAAAATc < 8:1196687/151‑1 (MQ=255)
aaaCTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCa < 1:1341098/151‑1 (MQ=255)
aaCTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCaa < 1:581287/151‑1 (MQ=255)
cTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCaaa > 2:1671078/1‑150 (MQ=255)
cTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCaaa > 2:137013/1‑150 (MQ=255)
cATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGc < 7:308618/151‑1 (MQ=255)
aTCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGc > 8:598354/1‑150 (MQ=255)
ttCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCaa > 5:145733/1‑149 (MQ=255)
tCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAgg > 4:714498/1‑151 (MQ=255)
tCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAgg > 8:551154/1‑151 (MQ=255)
tCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAg < 5:212002/150‑1 (MQ=255)
cATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGc > 2:522409/1‑151 (MQ=255)
cATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGc < 1:1008480/151‑1 (MQ=255)
tGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCtt > 7:835638/1‑151 (MQ=255)
aGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAAGCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATc > 3:131784/1‑151 (MQ=255)
aGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATc < 6:1393450/151‑1 (MQ=255)
aGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATc < 4:64547/151‑1 (MQ=255)
gACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTTTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAATGTCATGTTGGTTGTGCTGAAAATCAAAAGCAAAGGCTTGATcc < 3:419220/151‑1 (MQ=255)
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TGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCG > NC_000913/4364650‑4364945
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
