Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,389,838 |
C→T |
V175M (GTG→ATG) |
psd ← |
phosphatidylserine decarboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,389,838 | 0 | C | T | 97.1%
| 1519.4
/ 19.8
| 450 | V175M (GTG→ATG) | psd | phosphatidylserine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base C (7/6); new base T (215/221); total (222/228) |
| Fisher's exact test for biased strand distribution p-value = 7.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 |
Only 100 of 450 total aligned reads displayed.
ATACCTTCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCACGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCGGAACAGGT > NC_000913/4389690‑4389984
|
atACCTTCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGt > 3:152872/1‑151 (MQ=255)
aCCTTCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGtt < 3:1671976/150‑1 (MQ=255)
aCCTTCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTc > 2:104010/1‑151 (MQ=255)
ccTTCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCt > 3:1072858/1‑151 (MQ=255)
catggcgcgGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGCCCAGAATCTGCGCCATTGGGCCAAATTCTGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGGATGTTCTg < 2:349794/147‑1 (MQ=255)
tCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTg < 3:845321/149‑1 (MQ=255)
tCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCAGGTTCTGa < 8:1560599/150‑1 (MQ=255)
cgcgcgGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGc < 1:399522/151‑1 (MQ=255)
ggcggcgTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTga < 5:1030096/151‑1 (MQ=255)
ggcgTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGAt < 2:830309/151‑1 (MQ=255)
cgTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATgg < 7:725674/151‑1 (MQ=255)
cgTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATgg < 2:410715/151‑1 (MQ=255)
tAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGtt > 2:485397/1‑151 (MQ=255)
aaTGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGtt < 3:974290/150‑1 (MQ=255)
aaTGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAAGCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTa < 2:685982/151‑1 (MQ=255)
aTGGTGCCCGCCCAGAGCGTCTCATTGCTGCCAAGAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGTCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGATCCGTGAGATGGTTa < 1:1555070/150‑1 (MQ=255)
ggTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACg < 3:1431908/151‑1 (MQ=255)
gcccgcccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGga < 2:1306746/150‑1 (MQ=255)
ccgcccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGGTGGTTAACGgaga > 8:524816/1‑150 (MQ=255)
ccgcccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGgaga > 5:296823/1‑150 (MQ=255)
ccgcccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGagaa < 1:1644300/151‑1 (MQ=255)
cccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGagaag > 1:118886/1‑149 (MQ=255)
cccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTATGAGCCGTGAGATGGTTAACGGagaag > 1:1093165/1‑149 (MQ=255)
ccAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAgaga < 2:630231/151‑1 (MQ=255)
cAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGAt < 8:805747/151‑1 (MQ=255)
gACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCg < 1:203793/151‑1 (MQ=255)
aCCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGc > 6:50325/1‑151 (MQ=255)
cGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGccc > 6:711863/1‑151 (MQ=255)
gTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGCGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCg > 4:167589/1‑151 (MQ=255)
tcAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGc > 5:49080/1‑150 (MQ=255)
cAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCAc > 7:206882/1‑151 (MQ=255)
aaTGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACg > 8:182869/1‑151 (MQ=255)
aaTGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACg > 4:749926/1‑151 (MQ=255)
gcCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGatc < 4:245706/151‑1 (MQ=255)
gcCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGat < 6:1401389/150‑1 (MQ=255)
caacaaTCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGatcat < 6:1706284/151‑1 (MQ=255)
caacaaTCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGatcat > 7:1026549/1‑151 (MQ=255)
caacaaTCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGatcat < 7:1495780/151‑1 (MQ=255)
caaTCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCAtctc > 8:1264155/1‑151 (MQ=255)
gtcgCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGc > 8:1612543/1‑150 (MQ=255)
gcgCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAg < 5:16845/150‑1 (MQ=255)
cgCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAg < 1:607886/150‑1 (MQ=255)
cgCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGa < 4:827834/151‑1 (MQ=255)
ccAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGtt > 8:421954/1‑151 (MQ=255)
gAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCa < 5:417189/151‑1 (MQ=255)
gAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCa < 1:1017754/151‑1 (MQ=255)
tCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATAACGTTGCACgg > 8:371700/1‑151 (MQ=255)
cTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGc > 6:5676/1‑151 (MQ=255)
gcgcCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCa < 6:979299/150‑1 (MQ=255)
gcgcCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCAt > 8:733416/1‑151 (MQ=255)
gcgcCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCAAGCGTTCGTTACGGGCAAACAGATTCCGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCTGCACGTAGATCATCTCACGCAGAATACCGTTGCACgt < 7:966692/148‑2 (MQ=255)
cgcCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCCCGCAGAATACCGTTGCACGGCAtg > 6:100923/1‑151 (MQ=255)
gcCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCAtgt > 4:1105369/1‑151 (MQ=255)
gcCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCAtgt > 7:545198/1‑151 (MQ=255)
gggCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTAcgc < 3:353512/151‑1 (MQ=255)
gggCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTAcg < 8:575234/150‑1 (MQ=255)
ggCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTAcgcg < 6:1272624/151‑1 (MQ=255)
ggCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTAcgcg > 3:691160/1‑151 (MQ=255)
ccAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCggt > 6:412322/1‑151 (MQ=255)
cAAATTCGGTATCGAAAAGGCAAATCACGCGTGCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCggtg < 2:1130209/151‑1 (MQ=255)
aaaTTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCggtgg > 6:1118848/1‑151 (MQ=255)
aaTTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCAGGTGTACGCggtggg > 2:753316/1‑150 (MQ=255)
aTTCCGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCAAGCAGAATACCGTAGCAAGGCATGTCTAACCggtggt > 1:698671/1‑150 (MQ=255)
cGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTc > 3:257224/1‑151 (MQ=255)
cGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTc > 1:943951/1‑151 (MQ=255)
ggTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTc > 2:1570344/1‑150 (MQ=255)
ggTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTc > 7:1334126/1‑150 (MQ=255)
ggTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCa < 5:1424033/151‑1 (MQ=255)
tATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCAcg > 3:549347/1‑151 (MQ=255)
aTCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCAcgc > 6:1605018/1‑151 (MQ=255)
tCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCAcgcg > 4:100417/1‑151 (MQ=255)
gAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCggg > 2:1420972/1‑151 (MQ=255)
aaaaGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCgggg < 8:1455367/151‑1 (MQ=255)
aaaGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGga < 4:1189255/151‑1 (MQ=255)
aaaGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGga < 4:385033/151‑1 (MQ=255)
aGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGgaga < 4:1281190/151‑1 (MQ=255)
gCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAgg < 8:1418730/151‑1 (MQ=255)
aaaTCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGt > 2:976612/1‑150 (MQ=255)
aaaTCACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTa < 7:845233/151‑1 (MQ=255)
cACGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTg > 2:88188/1‑151 (MQ=255)
aCGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTgg > 8:273142/1‑151 (MQ=255)
aCGCGTTCGTTACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTgg < 6:29205/151‑1 (MQ=255)
gcgTTCGTTACGGGCAAACAGATTCGGCACGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTc > 8:1055097/1‑151 (MQ=255)
cgttcgttACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTca < 4:1535208/151‑1 (MQ=255)
ttcgttACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTcac > 3:764258/1‑150 (MQ=255)
tcgttACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTcaca > 2:1645463/1‑150 (MQ=255)
tcgttACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTcaca > 3:1223560/1‑150 (MQ=255)
ttACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGGCCCaaagg > 1:838052/1‑149 (MQ=255)
tACGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGt > 7:1290040/1‑151 (MQ=255)
aCGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACTCGGGGAGATGTAAGTGGTCACAAACGt < 4:467539/150‑1 (MQ=255)
aCGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGt > 4:976737/1‑150 (MQ=255)
aCGGGCAAACAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTa < 7:36667/151‑1 (MQ=255)
aCGGGCAAACAGATTCGGCACGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTa < 5:862851/151‑1 (MQ=255)
aaaCAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTg > 5:739613/1‑151 (MQ=255)
aaCAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGc < 1:1422877/151‑1 (MQ=255)
aCAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCg > 7:169468/1‑151 (MQ=255)
cAGATTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCgg > 6:777037/1‑151 (MQ=255)
aTTCGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCGGAAc < 5:116992/151‑1 (MQ=255)
cGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCGGAACAgg < 5:1378465/151‑1 (MQ=255)
cGGCATGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCGGAACAgg < 5:121880/151‑1 (MQ=255)
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ATACCTTCGCGCGGCGGCGTAATGGTGCCCGCCCAGACCGTCTCAATGCTGCCAACAATCGTCGCTCCGACCAGAATCTGCGCCATTGGGCCAAATTCGGTATCGAAAAGGCAAATCACGCGTTCGTTACGGGCAAACAGATTCGGCACGTTCTGAGCCGTGAGATGGTTAACGGAGAAGAGATCGCCCGGCACGTAGATCATCTCACGCAGAATACCGTTGCACGGCATGTGTACGCGGTGGTAGTCACGCGGGGAGAGGTAAGTGGTCACAAACGTACCGTTGCGGAACAGGT > NC_000913/4389690‑4389984
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
