Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,451,280 |
C→T |
P75S (CCG→TCG) |
ytfR → |
putative sugar ABC transporter ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,451,280 | 0 | C | T | 96.4%
| 1275.1
/ 23.1
| 385 | P75S (CCG→TCG) | ytfR | putative sugar ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base C (9/5); new base T (169/201); total (179/206) |
| Fisher's exact test for biased strand distribution p-value = 1.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 386 total aligned reads displayed.
TAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGAA > NC_000913/4451131‑4451426
|
aGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCg < 1:103570/151‑1 (MQ=255)
gACAACGTTGATTTCAGCCTGCGCCGGGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATAAAAGCATTTACTGGTGTATAACACTACGATCGCGGCACCATCTGGCTCGAAGGCCACGCTAACTCATCg > 5:506204/1‑150 (MQ=255)
aCAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGaa < 1:415818/151‑1 (MQ=255)
cAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGaa > 4:1333529/1‑150 (MQ=255)
aaCGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGaaa > 7:748448/1‑150 (MQ=255)
gTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGaataat > 3:1008866/1‑150 (MQ=255)
gATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCg < 6:1368509/151‑1 (MQ=255)
ttCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGccc > 7:1314015/1‑151 (MQ=255)
ccTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACACCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCAcgcg < 8:573401/151‑1 (MQ=255)
gcCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGcaac > 8:1325761/1‑150 (MQ=255)
cGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCaacaac > 5:1274412/1‑151 (MQ=255)
gTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACt < 4:81048/151‑1 (MQ=255)
ggCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTc < 8:152867/150‑1 (MQ=255)
ggCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCg > 6:1663141/1‑151 (MQ=255)
gCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCgg < 8:499650/151‑1 (MQ=255)
aTCATGGCGCTGCTCGTTGAAAACGGGGCTGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTg < 1:1667933/151‑1 (MQ=255)
aTCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTg > 7:1131619/1‑151 (MQ=255)
cATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGc < 5:1342221/151‑1 (MQ=255)
tGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCAc > 7:158620/1‑151 (MQ=255)
ggCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCAcc > 7:1257008/1‑151 (MQ=255)
ggCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCAc < 8:283652/150‑1 (MQ=255)
gctgctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTc > 8:903139/1‑151 (MQ=255)
gctgctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTc > 1:759977/1‑151 (MQ=255)
ctgctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCt > 3:157479/1‑151 (MQ=255)
gctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTTGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTTGCACCGTCt < 1:572367/149‑1 (MQ=255)
gctCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTAt > 6:1256875/1‑151 (MQ=255)
tCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCCATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATc > 4:1014483/1‑150 (MQ=255)
ggTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAgg < 2:39937/151‑1 (MQ=255)
tGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGa > 2:778477/1‑150 (MQ=255)
aaaaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGt < 3:446706/151‑1 (MQ=255)
aaaaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGt > 5:1160227/1‑151 (MQ=255)
aaaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTc > 6:736153/1‑151 (MQ=255)
aaCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCa < 3:1142795/151‑1 (MQ=255)
aCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCaa < 6:836324/151‑1 (MQ=255)
aCGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCa > 6:1064995/1‑150 (MQ=255)
cGGGGCGGGAAAATCAACCCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGCCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTCCCACCGTCTATCAGGAAGTCAAc > 4:1304044/1‑151 (MQ=255)
gggCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCt > 4:228787/1‑151 (MQ=255)
ggCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTg < 7:810602/151‑1 (MQ=255)
cGGGAACATCAACGCTAATCAAATCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCt < 7:309780/151‑1 (MQ=255)
gggAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTa < 5:963919/151‑1 (MQ=255)
gggAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTa < 6:131574/151‑1 (MQ=255)
aaaaTCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTAccc > 4:932328/1‑151 (MQ=255)
aaTCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCaa < 5:1671455/151‑1 (MQ=255)
aTCAACGCTACTCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAACTACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAat < 2:901671/151‑1 (MQ=255)
aTCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAat < 6:57253/151‑1 (MQ=255)
cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat > 5:689224/1‑151 (MQ=255)
cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat < 8:1098774/151‑1 (MQ=255)
cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat < 8:643809/151‑1 (MQ=255)
cAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAatat < 3:1047637/151‑1 (MQ=255)
cGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATgtc < 1:939646/151‑1 (MQ=255)
aaTCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATgtcggtc < 1:14092/151‑1 (MQ=255)
cAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCt < 2:923124/151‑1 (MQ=255)
aaaGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTg < 7:233341/151‑1 (MQ=255)
aaaGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTCGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACCCGCAACAACTCGCCATTGCCACCCTCAATCAGCAAGTCAACCTCCTACCCAAAATgtaggtacaa > 6:237602/1‑146 (MQ=255)
cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCTTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa < 5:1063906/151‑1 (MQ=255)
cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa < 3:559841/151‑1 (MQ=255)
cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa < 2:957871/151‑1 (MQ=255)
cATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATaa < 8:1659842/151‑1 (MQ=255)
aTTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAAt > 5:610118/1‑151 (MQ=255)
tAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCt > 4:339254/1‑151 (MQ=255)
tAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCt > 1:208420/1‑151 (MQ=255)
aaCTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCt < 3:512770/150‑1 (MQ=255)
aaCTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAAACTGCTACCCAATATGTCGGTCGCTGATAATCt > 1:117648/1‑150 (MQ=255)
aCTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTAt > 4:504298/1‑151 (MQ=255)
cTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTAtt > 1:1506047/1‑151 (MQ=255)
ggTCTATACCACGCCGATCGCCGCACCATCTCGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGGCAACCTGCTACCCAATATGGCGGTCGCGGATAATCTATTta < 3:282204/151‑1 (MQ=255)
gtgtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtat < 8:1231106/151‑1 (MQ=255)
gtgtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtat < 2:222266/151‑1 (MQ=255)
tgtATACCACGCCGATCGCGGCCCCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCCACACCTCGGCATGGGCACCGTCTATCAGGAAGTCCCCCTGCTACCCCCAATGTCGGGCGCGGATAAGCTATTtatg > 6:971021/1‑150 (MQ=255)
tgtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtat > 8:541348/1‑150 (MQ=255)
gtATACCACGCCGATCGCGGGACCATCTGGCTGGAAGGCCAGGCTATATCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtata < 5:819629/150‑1 (MQ=255)
gtATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTtata < 2:492644/150‑1 (MQ=255)
ataCCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGc > 7:916788/1‑151 (MQ=255)
aCCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGcc < 4:159994/150‑1 (MQ=255)
cGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCCCGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGa > 8:217070/1‑150 (MQ=255)
cGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAAccc > 7:641782/1‑151 (MQ=255)
cGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAAccc < 5:371090/151‑1 (MQ=255)
aTCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaa < 7:40721/151‑1 (MQ=255)
aTCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaa < 3:1210754/151‑1 (MQ=255)
gcgGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACg < 1:801050/151‑1 (MQ=255)
cgGCACCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGc > 5:766506/1‑151 (MQ=255)
aCCATCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCg < 2:141326/151‑1 (MQ=255)
ccATCTGGCTGGAAGGCCAGGCTATCTCACCGATAAATACCGCCCACGCGCAACACCTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTTTAGGCCGGGAACCCACACGCTTCgg > 4:1070248/1‑151 (MQ=255)
aTCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaaa < 7:1469109/141‑1 (MQ=255)
aTCTGGCTGGAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCaaa > 4:1475352/1‑141 (MQ=255)
ggctggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGcc < 4:142856/147‑1 (MQ=255)
gctgtAAGGGCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACGGTCTATCAGGAAGTGAACCTGCTACCCAATTTGTCGGTCGCTGATAATCTATTTATAGGCGGCGAACCCAAACGCTTCGGCCTTCTa < 4:751914/151‑1 (MQ=255)
gtggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAc < 4:1126948/150‑1 (MQ=255)
tggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAGTATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcg > 2:297141/1‑151 (MQ=255)
ggAAGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcgc > 5:1458766/1‑151 (MQ=255)
aGGCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcgccgc < 2:1499091/151‑1 (MQ=255)
ggCCAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTAcgccgc > 1:897904/1‑150 (MQ=255)
ccAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCaaa < 7:514731/151‑1 (MQ=255)
cAGGCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCaa > 3:1347611/1‑149 (MQ=255)
ggCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAagag < 1:656414/151‑1 (MQ=255)
ggCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAagag < 3:694667/151‑1 (MQ=255)
gCTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAgaga < 2:1092299/151‑1 (MQ=255)
cTATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGACAt > 2:1262692/1‑151 (MQ=255)
tATCTCATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATg > 5:446196/1‑151 (MQ=255)
tcATCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCCAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGaa > 1:1115218/1‑150 (MQ=255)
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TAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGAA > NC_000913/4451131‑4451426
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
