Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,529,039 |
C→T |
G402D (GGT→GAT) |
sgcC ← |
putative PTS system EIIC permease component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,529,039 | 0 | C | T | 94.7%
| 1506.9
/ 50.6
| 470 | G402D (GGT→GAT) | sgcC | putative PTS system EIIC permease component |
| Reads supporting (aligned to +/- strand): ref base C (13/12); new base T (259/185); total (273/197) |
| Fisher's exact test for biased strand distribution p-value = 5.40e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 |
Only 100 of 471 total aligned reads displayed.
CCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCA > NC_000913/4528891‑4529186
|
ccAATAACCTCTTTTAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGa < 6:376811/151‑1 (MQ=255)
ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGa < 8:1587597/151‑1 (MQ=255)
aaTAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAAc < 8:1436478/151‑1 (MQ=255)
aTAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAAc > 6:914929/1‑150 (MQ=255)
aaCCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACat < 6:1658531/150‑1 (MQ=255)
ccTCTTTCAGCCAACTCATTGAAAGTACTCCTTTTTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGATCATAtt > 1:392315/1‑151 (MQ=255)
ccTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATAtt > 8:770511/1‑151 (MQ=255)
ccTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATAtt > 3:50359/1‑151 (MQ=255)
ccTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATAtt > 3:1294807/1‑151 (MQ=255)
ctctTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTg > 6:514091/1‑151 (MQ=255)
tttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGCCAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGacc > 5:1203079/1‑151 (MQ=255)
ttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGCCGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGccc > 5:690566/1‑150 (MQ=255)
ttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGccc < 1:511972/150‑1 (MQ=255)
tCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTAAGAAATCGACCAATCGAACATATTGCCCAc > 2:211388/1‑151 (MQ=255)
cAACTCATTGAAAGTACTCCTTATTCCGATATTTCACGTTTACGTAAGTACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCGACggcc > 4:282066/1‑148 (MQ=255)
cATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCt > 8:842360/1‑151 (MQ=255)
aTTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGACAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTg > 7:1597261/1‑151 (MQ=255)
tGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTg > 1:829045/1‑149 (MQ=255)
gAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTgag < 6:1448773/150‑1 (MQ=255)
gAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAAATCAGAAATCGACCAATCGAGCATATTGCCCACGGACAACGCTgaga < 1:607282/151‑1 (MQ=255)
aaaGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTg > 3:151655/1‑147 (MQ=255)
aaaGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACCACAACGCCAATAATCCCAAGCGCCATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACACCGCTg > 6:62150/1‑147 (MQ=255)
aaGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGAtt < 3:1168125/151‑1 (MQ=255)
aGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGAttt > 5:278950/1‑151 (MQ=255)
aGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGAttt > 8:1688787/1‑151 (MQ=255)
aCTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTgcg < 3:597242/151‑1 (MQ=255)
aCTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTgcg > 2:306117/1‑151 (MQ=255)
aCTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTgc < 5:780991/150‑1 (MQ=255)
ccTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCAc < 2:538241/151‑1 (MQ=255)
ccTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCAc < 1:1266481/151‑1 (MQ=255)
tATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACttt > 8:359025/1‑151 (MQ=255)
aTTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACttt < 2:469187/150‑1 (MQ=255)
ttCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACCACAACGAAAATAATCACAAGCGACATCAATTCAGAAATAGACAAATCGAAAATATTGGCCACGGACAACGCTGAGATTTGATCACTTTc > 6:804856/1‑150 (MQ=255)
tCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCAc > 7:1107775/1‑151 (MQ=255)
cGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCg < 4:1411638/151‑1 (MQ=255)
cGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCg > 5:833944/1‑151 (MQ=255)
gATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCgg > 3:417306/1‑151 (MQ=255)
tAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGc > 6:856446/1‑150 (MQ=255)
aaTTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCa > 5:474490/1‑150 (MQ=255)
aTTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCaa > 6:981286/1‑150 (MQ=255)
aCGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTg < 1:1099790/151‑1 (MQ=255)
tttACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGaa < 3:1004104/150‑1 (MQ=255)
tACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAAc < 1:981375/150‑1 (MQ=255)
tAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCt > 6:1064879/1‑151 (MQ=255)
aaGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACCACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCtt > 4:358018/1‑151 (MQ=255)
aaGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCtt > 2:399478/1‑151 (MQ=255)
aaGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCt < 5:609002/150‑1 (MQ=255)
aCAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAg < 8:677641/151‑1 (MQ=255)
cAGCCCGACGCTGGAGACAATACCGACCGCCACGACAACGCCAATAATCCGACCCGACATCAATTCAGAAATCGACCAATCTAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCTCCTTTGAgc < 7:297414/151‑1 (MQ=255)
cAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAgc > 5:1320016/1‑151 (MQ=255)
aGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAgcg < 8:254080/151‑1 (MQ=255)
gCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAgcgc > 5:1488237/1‑151 (MQ=255)
acgacgCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGcc > 5:967160/1‑150 (MQ=255)
cgacgCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCAt < 6:226990/151‑1 (MQ=255)
gagtcTGGCGTCAATACCGACCTCCACGACAAGTCGAATAATCCCAAGCGTCATCAATTCTGAATTCGTCCATTCGTTCATATTGCCCAATGACAAGGCTGAGATTTGCGCACTTTCACCTGCAAAACTGAAACCGGCTTTGAGGGCGAtt < 1:1537769/147‑1 (MQ=255)
cgCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTc < 7:504937/151‑1 (MQ=255)
cTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCAGAGAATTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTc > 2:649228/1‑149 (MQ=255)
tGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGt > 5:1132902/1‑151 (MQ=255)
gCGACAATACCGACCGCCACGACAACGCCAATAATCCGAAGCGACCTAAATTCAGAAATCGACCAATCTAACATATTGCCAACGGACAACGCTGAGATTTGCGCACTTACACCGGCAAAACTGAAACCGCCTTTGAGAGCCATTTCAGTg > 8:552722/1‑150 (MQ=255)
cGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTc > 5:1421552/1‑145 (MQ=255)
gACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCACTCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACCGAAACCGCCTTTGAGCGCCATTTCAGTGAAg < 2:1278075/151‑1 (MQ=255)
aCAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTTAGATTAGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGt < 2:1413798/151‑1 (MQ=255)
aCAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGt > 6:263218/1‑151 (MQ=255)
cAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGt > 4:1617325/1‑150 (MQ=255)
aaTACCGACCGCCACGACAACGCCAATAATACCAAGCGACATCAAATCAGAAATCGACGAAACGAACATATAGCCCACCCACTACGCTGAGATTTGCGCAGATTCACCCGCAAATCTGAACCCGCCATTGAGCGCCATTTCACTGAAgaa > 4:786955/1‑148 (MQ=255)
accgaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGgc < 1:692096/151‑1 (MQ=255)
ccgaccgCCACGACAAAGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGgcg < 5:1591860/151‑1 (MQ=255)
ccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGaa < 8:500004/151‑1 (MQ=255)
cgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAAc < 3:982432/151‑1 (MQ=255)
cgtcAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGATCATATTGGCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAATACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGt < 6:590446/148‑1 (MQ=255)
cGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGt < 7:1373849/151‑1 (MQ=255)
cGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGt < 4:726209/151‑1 (MQ=255)
aCAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTgg < 3:791076/151‑1 (MQ=255)
aaCGCCAATAATGCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGAGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCg < 1:860791/151‑1 (MQ=255)
aaCGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCg < 7:823618/151‑1 (MQ=255)
cGCCAATACTCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCACGAACTGGGTGGCGAt < 7:691081/151‑1 (MQ=255)
cGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGAt < 3:205163/151‑1 (MQ=255)
aataatCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATcagc > 7:405200/1‑151 (MQ=255)
aatCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAgg < 1:1026207/151‑1 (MQ=255)
aatCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAgg < 2:770821/151‑1 (MQ=255)
aatCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAgg > 6:122913/1‑151 (MQ=255)
tCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGAc > 3:747678/1‑151 (MQ=255)
tCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGAc > 4:1207127/1‑151 (MQ=255)
cccAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACg < 3:1369109/151‑1 (MQ=255)
gACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAatca < 7:893798/151‑1 (MQ=255)
gACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAatc > 2:1542903/1‑150 (MQ=255)
aCATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAatcat < 7:1518267/151‑1 (MQ=255)
cATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTCGCGATCAGCAGGACGGTAatcatc > 3:1416943/1‑151 (MQ=255)
aaTTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACg > 1:1457589/1‑150 (MQ=255)
aaTTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCAAACTGGGTGGCGATCAGCAGGACGGTAATCATCACg > 7:959306/1‑150 (MQ=255)
aTTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGAt > 4:548030/1‑151 (MQ=255)
tCAGAAATCGACCAATCGAACTTATTGCCCACGGACATCGCTGAGATTTGCGCACTTTCACAGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCATTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATg < 5:1067427/150‑1 (MQ=255)
tCAGAAATCGACCAATCGAACATATTCCCCACCGACAACGATGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGAGCAGCAGGACGGTAATCATCACGATg < 6:1339156/150‑1 (MQ=255)
aaTCGACCGATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCg < 8:605365/151‑1 (MQ=255)
tCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCt > 1:241240/1‑151 (MQ=255)
tCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCACGc > 2:1333438/1‑150 (MQ=255)
gACCAATCGAACATATTGCCCACGGACAACTCTGAGATTTGCGCACTTTGACCGGCAAAACTGAAACCTCCTTTTAGCTAAATTTCAGTGAAGTACGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTa < 8:1236781/151‑1 (MQ=255)
ccAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATc > 6:328470/1‑151 (MQ=255)
ccAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATc > 4:995112/1‑151 (MQ=255)
cAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCa < 4:1111305/151‑1 (MQ=255)
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CCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCA > NC_000913/4528891‑4529186
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
