Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F91 I8 R1
|
12 |
457.5 |
14260847 |
98.7% |
14075455 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,267,610 |
C→A |
intergenic (+12/‑244) |
tdcR → / → yhaB |
L‑threonine dehydratase operon activator protein/uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,267,610 | 0 | C | A | 95.8%
| 1893.3
/ 46.2
| 526 | intergenic (+12/‑244) | tdcR/yhaB | L‑threonine dehydratase operon activator protein/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base C (13/9); new base A (294/210); total (307/219) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 540 total aligned reads displayed.
GTTGGAGAACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTA > NC_000913/3267463‑3267757
|
gttgGAGAACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCa < 3:905113/151‑1 (MQ=255)
gaACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGGTTTCCATAAATTCTTCTCCCATCATAGGcg < 5:940470/151‑1 (MQ=255)
aacaaacaTTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCGTAGGcg < 6:1461126/150‑1 (MQ=255)
caaacaTTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGcgacg > 3:1692002/1‑151 (MQ=255)
aaacaTTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGcgacg > 7:1149870/1‑150 (MQ=255)
aaacaTTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGcgacg > 3:639996/1‑150 (MQ=255)
caTTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAAt > 4:163176/1‑150 (MQ=255)
caTTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATa < 1:1721028/151‑1 (MQ=255)
aatttatttTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATa < 7:714246/150‑1 (MQ=255)
tttattttatCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGc > 3:1521391/1‑151 (MQ=255)
ttattttatCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGc > 1:749238/1‑150 (MQ=255)
attttatCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCAtt > 5:1445214/1‑151 (MQ=255)
tttatCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCAtttt > 7:628491/1‑151 (MQ=255)
ttatCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTtg > 8:413617/1‑151 (MQ=255)
tatCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTtgt > 1:1579632/1‑151 (MQ=255)
atCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTtgtg < 5:789173/151‑1 (MQ=255)
aaTATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTg > 8:627719/1‑151 (MQ=255)
atatTTTAAAATTTCGAATACATGTATTGATCATCTCGAGCAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGa < 8:1296991/151‑1 (MQ=255)
tttAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGAt > 1:522958/1‑151 (MQ=255)
ttAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATc > 6:1570532/1‑151 (MQ=255)
aTTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACaa > 4:571184/1‑150 (MQ=255)
gAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGa > 3:1201562/1‑150 (MQ=255)
aTACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGaat > 1:610390/1‑150 (MQ=255)
aTACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGaat > 1:804304/1‑150 (MQ=255)
aTACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGaat > 8:893702/1‑150 (MQ=255)
tACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGaata > 6:899763/1‑150 (MQ=255)
aCATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCCCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGaataat < 1:1345911/151‑1 (MQ=255)
aTGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTg < 2:130713/151‑1 (MQ=255)
tGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGc > 3:77207/1‑151 (MQ=255)
gTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCt > 7:1043241/1‑151 (MQ=255)
gTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCt > 1:1222168/1‑151 (MQ=255)
tATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTg > 5:681640/1‑151 (MQ=255)
tATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGCACGTCATTTAGTGAATGCAATCGTTTTCAATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATAACAAAACGAATAATTGCtt > 3:335014/1‑150 (MQ=255)
aTTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGa < 4:473801/151‑1 (MQ=255)
tcatcTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATcgcc > 5:1612316/1‑151 (MQ=255)
tcatcTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGCGTTGAGGATCACAAAACGAATAATTGCTGATcgcc > 8:710918/1‑151 (MQ=255)
acatcTCCAAAAAATTATTAACGTCAACTTTTTCGCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATcgcc < 2:378540/150‑1 (MQ=255)
catcTAGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTCTTGAGGATCACAAAACGAATAATTGCTTATcaccg > 7:840618/1‑151 (MQ=255)
cGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGAt > 7:199424/1‑150 (MQ=255)
cGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGAt > 7:167175/1‑150 (MQ=255)
cAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGt < 4:1250470/151‑1 (MQ=255)
gATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagac > 5:248406/1‑151 (MQ=255)
gATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGAGAAGGTCagac > 2:63860/1‑151 (MQ=255)
aTTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagac < 2:752719/150‑1 (MQ=255)
tAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagacaa > 4:979656/1‑150 (MQ=255)
aaCGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagacaa > 8:1495228/1‑149 (MQ=255)
aCGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagacaaaga < 6:1130872/151‑1 (MQ=255)
aCGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagacaaaga < 6:626239/151‑1 (MQ=255)
ggcAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagacaaagaca < 2:462355/149‑1 (MQ=255)
gTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCagacaaagac > 5:739121/1‑150 (MQ=255)
aaCTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGacaac > 2:1145509/1‑150 (MQ=255)
aCTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGAcaacaa < 7:130621/151‑1 (MQ=255)
aCTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGAcaacaa < 2:1241049/151‑1 (MQ=255)
cTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGacaaca > 7:1485004/1‑149 (MQ=255)
cTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGacaaca > 5:361689/1‑149 (MQ=255)
ttttttCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAg < 4:1181423/149‑1 (MQ=255)
ttCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGa > 6:225956/1‑150 (MQ=255)
tctcTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCAATAAATTCTTCTCCCATCATAGGCTACGAATAGAATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCAGAGATAAGGTCAGACAAAGACAACAAGGGaa > 6:1289485/1‑150 (MQ=255)
tcttctGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAAtt > 3:20469/1‑151 (MQ=255)
cttctGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGTATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGaaa < 2:1043765/148‑1 (MQ=255)
cttctGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGaaa < 5:1546354/148‑1 (MQ=255)
cttctGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAAttt > 3:1300938/1‑151 (MQ=255)
ttctGACAGGACGTCATTTTGTGAATGCAATCGTTTTCAATAAATTCTTCTCACATCATAGGCGAAGAATAGAATTTTTTGTTGAGGATCACAAAACGAATAATTGCTGATCGAAGAGATAAGGTCATACAAAGAAAACAAGGGAAAtatt > 6:684847/1‑151 (MQ=255)
tGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTcac > 1:4200/1‑151 (MQ=255)
tGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTcac > 7:451256/1‑151 (MQ=255)
aCAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACag < 8:1719178/151‑1 (MQ=255)
aGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACag > 8:1187189/1‑149 (MQ=255)
ccGTCATTTTGTGAATGCAATAGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCtt < 3:1066761/150‑1 (MQ=255)
aCGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCtt > 2:953038/1‑151 (MQ=255)
gTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTc < 7:915813/140‑1 (MQ=255)
gTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCtttt < 8:354700/151‑1 (MQ=255)
cATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTg > 4:1719243/1‑150 (MQ=255)
aTTTTTTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGTATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGAt < 7:340698/151‑1 (MQ=255)
aTTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGAt < 8:1376929/151‑1 (MQ=255)
tttGTGAATGCAATCGTTTTCCATAAATTCTTGTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATc < 5:564021/150‑1 (MQ=255)
ttGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGGCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCg < 8:1028296/150‑1 (MQ=255)
ttGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAggaattattcgt < 6:1723310/116‑11 (MQ=255)
tgtgAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCgg < 5:128206/150‑1 (MQ=255)
gAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTa < 5:1523319/151‑1 (MQ=255)
gAATGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTa < 4:250835/151‑1 (MQ=255)
aaTGCAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAg < 2:1461816/151‑1 (MQ=255)
cAATCGTTTTCCATAAATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGcc > 2:246168/1‑150 (MQ=255)
cAATCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCca < 2:690747/151‑1 (MQ=255)
aaTCGTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCcac < 8:802807/151‑1 (MQ=255)
gTTTTCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGaa < 5:108385/151‑1 (MQ=255)
ttttCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAAt > 1:910187/1‑151 (MQ=255)
tttCCATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATg > 6:787736/1‑151 (MQ=255)
ccATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTg < 3:1744473/151‑1 (MQ=255)
ccATAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTg > 1:325710/1‑151 (MQ=255)
tAAATTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCtt > 8:234409/1‑151 (MQ=255)
aaTTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCg > 4:1081218/1‑151 (MQ=255)
aaTTCTTCTCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCg > 1:1034682/1‑151 (MQ=255)
ttctCCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGGAGGGCAGAGAATGTTGCTTCTTTTa > 7:1332329/1‑150 (MQ=255)
tctcCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGttt < 1:690757/148‑1 (MQ=255)
tctcCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACt > 1:1455714/1‑151 (MQ=255)
tcCCATCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGt > 2:165857/1‑151 (MQ=255)
cccaTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGt < 4:752345/150‑1 (MQ=255)
cccaTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGt > 4:1426677/1‑150 (MQ=255)
cccaTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGt > 4:1340809/1‑150 (MQ=255)
cccaTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTa < 6:403506/151‑1 (MQ=255)
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GTTGGAGAACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAAATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGATCGCCGCGATAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTA > NC_000913/3267463‑3267757
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
