Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F63 I9 R1
|
15 |
403.8 |
12704894 |
98.5% |
12514320 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,187,667 |
T→A |
F773Y (TTC→TAC) |
rpoC → |
RNA polymerase, beta prime subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,187,667 | 0 | T | A | 98.8%
| 1547.9
/ 3.3
| 408 | F773Y (TTC→TAC) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/4); new base A (205/197); total (207/201) |
| Fisher's exact test for biased strand distribution p-value = 2.11e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.85e-01 |
Only 100 of 410 total aligned reads displayed.
TGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCATGAT > NC_000913/4187520‑4187814
|
atgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACAtct > 6:859892/1‑151 (MQ=255)
ggCCGACTCCGGTGCGCGTGGTTTTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTcc > 8:664392/1‑151 (MQ=255)
ggCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGTCGAAGCCGGATGGCTCCATCATCGAACCGCCAATCACCGCGAACTTCAGTGAAGGTCTGAACGTACTACAGTACGACATCTcc > 8:438371/1‑151 (MQ=255)
gCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTcca < 6:294789/151‑1 (MQ=255)
cGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTccacc < 3:1146495/151‑1 (MQ=255)
gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTccaccc > 8:1513456/1‑151 (MQ=255)
gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTccaccc > 2:1525207/1‑151 (MQ=255)
tCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACg > 1:732079/1‑151 (MQ=255)
ccGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTccacccac < 5:236681/149‑1 (MQ=255)
ccGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACgg < 8:8683/151‑1 (MQ=255)
ggTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTg > 5:321559/1‑151 (MQ=255)
gTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGc > 4:176353/1‑151 (MQ=255)
ggcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCg < 7:1429207/150‑1 (MQ=255)
gTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTa > 2:191151/1‑150 (MQ=255)
tCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGt < 2:1206790/150‑1 (MQ=255)
tCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGt < 1:1488026/150‑1 (MQ=255)
gagtgacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGACGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAATGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTc < 3:316671/143‑1 (MQ=255)
gCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTgg < 5:78119/151‑1 (MQ=255)
cGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAAGCCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGc < 2:500980/151‑1 (MQ=255)
gCACAGATTCGTCAGCTTGCTGGTATGCGGGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGTAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGACCGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCgg < 8:731313/151‑1 (MQ=255)
caGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGAt > 2:23947/1‑150 (MQ=255)
aGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCCCCCACGGTGCTCGTAAAGGTCTGGCTGATAc > 5:1265554/1‑151 (MQ=255)
aTTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCg > 7:1170792/1‑151 (MQ=255)
aTTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCg > 7:793783/1‑151 (MQ=255)
cAGCTTGCTTGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGa < 7:1585196/151‑1 (MQ=255)
cTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGaaa > 8:1411171/1‑150 (MQ=255)
ttGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAAc > 3:1207725/1‑151 (MQ=255)
ttGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAAc > 1:1212442/1‑151 (MQ=255)
tGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACt > 5:37482/1‑151 (MQ=255)
gtGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGc < 1:195106/150‑1 (MQ=255)
ggTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGa < 3:1261452/151‑1 (MQ=255)
aTGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc < 5:631057/150‑1 (MQ=255)
aTGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACt > 7:718172/1‑151 (MQ=255)
aTGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACt > 4:1055645/1‑151 (MQ=255)
aTGCGTGGTCTGAGGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc < 3:645787/150‑1 (MQ=255)
gCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTc < 8:1045417/150‑1 (MQ=255)
gTCTGATGGCGCAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTa < 6:1267792/151‑1 (MQ=255)
tCTGATGGCGAAGCCGGATGGCGCCATCATCGAACCGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCCCCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAc > 6:738552/1‑151 (MQ=255)
gATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAcc < 4:1535232/149‑1 (MQ=255)
ggCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGAc < 1:1307242/150‑1 (MQ=255)
ggCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGAc < 7:859264/150‑1 (MQ=255)
ggCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACt > 4:1244092/1‑151 (MQ=255)
gCGAAGCGGGATGGCTCCATCATCGAATCGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc < 3:1366191/151‑1 (MQ=255)
cGAAGCAGGATGGCTCCATCATCTAAAAGCCAATAACCGCGAACTTACGAGAAGGTCTGAACATACTCAAGTACTACATCTCCACGCAAGTTGCTCGTAAAGGTCTGGCGGATACCGAACTGAAAACTGAGAACTCAGGTTACCTGACtcg > 1:860991/1‑151 (MQ=255)
gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCCCCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgt > 6:335534/1‑151 (MQ=255)
gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgt > 7:1313127/1‑151 (MQ=255)
aaGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgtc < 4:901891/151‑1 (MQ=255)
aaGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtcgtc < 3:1321905/151‑1 (MQ=255)
gCCGGATGGCTCCATCATCGAAACGCCAATCACCGCTAACTTCCGTGAAGGTCTGAACGTACTACAGTACTAAATCTCCACCTAAGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAATAGTGCGAACTCCGGTTACCTGACTcgtcgt < 5:513969/151‑1 (MQ=255)
cGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCt > 6:1009017/1‑151 (MQ=255)
ggATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTg > 4:1268443/1‑151 (MQ=255)
aTGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGAGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCGACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTgg < 5:1480980/150‑1 (MQ=255)
tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACg > 4:132968/1‑151 (MQ=255)
ccATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGAc < 8:1250103/149‑1 (MQ=255)
ccATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACgc < 2:709689/151‑2 (MQ=255)
catcatCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTg > 3:734229/1‑151 (MQ=255)
catcGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgc < 4:1493127/150‑1 (MQ=255)
atcGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcgc > 1:1034479/1‑151 (MQ=255)
cGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCt < 4:547590/151‑1 (MQ=255)
ccAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTAGATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTGGTCTGGTTGACGTGGCGCAGGACCtgg < 6:565566/151‑1 (MQ=255)
ccAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGAGACCGCACTGAAAACAGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg > 6:1091169/1‑151 (MQ=255)
cAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggt > 8:189661/1‑151 (MQ=255)
aaTCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg > 3:476400/1‑151 (MQ=255)
cACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGtt > 4:750598/1‑151 (MQ=255)
aCCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGtt > 1:1437580/1‑150 (MQ=255)
aCCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGtt > 6:93950/1‑150 (MQ=255)
aCCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGtt > 6:458559/1‑150 (MQ=255)
cgcgAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTAcc < 2:377762/151‑1 (MQ=255)
gcgAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCg > 3:1035258/1‑151 (MQ=255)
gcgAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCg < 5:1142785/151‑1 (MQ=255)
gcgAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCg > 4:1189190/1‑151 (MQ=255)
gcgAACTTCCGTCAAGGTCTGAACGTACTCCACTACTACAACTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGATAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTAccc > 7:208733/1‑150 (MQ=255)
gAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGa > 3:174624/1‑150 (MQ=255)
aCTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGa < 5:1061622/151‑1 (MQ=255)
aCTTCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGa < 7:542024/151‑1 (MQ=255)
ttCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACg > 5:1109921/1‑151 (MQ=255)
tCCGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGCTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACg > 2:1049104/1‑150 (MQ=255)
cGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGAtt > 7:93697/1‑151 (MQ=255)
cGTGAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGAtt < 4:610891/151‑1 (MQ=255)
gAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATtgtg < 6:1563718/151‑1 (MQ=255)
gAAGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATtgtg > 2:839761/1‑151 (MQ=255)
aGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGt > 6:438397/1‑151 (MQ=255)
aGGTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGt < 2:982925/151‑1 (MQ=255)
ggTCTGAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGt > 7:613188/1‑150 (MQ=255)
gAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGGCGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTAccc < 3:224145/149‑1 (MQ=255)
gAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCa < 4:1025129/150‑1 (MQ=255)
gAACGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCAt > 3:286072/1‑151 (MQ=255)
aaCGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAACGGTCTGGCGGATACCGCACTGAAAACTGCGAACTACTGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATg < 1:353207/151‑1 (MQ=255)
aaCGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATg < 6:623803/151‑1 (MQ=255)
aCGTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGa < 7:1097674/151‑1 (MQ=255)
gTACTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGa > 1:578229/1‑149 (MQ=255)
aCTCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGt < 1:127767/151‑1 (MQ=255)
tCCAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTAt > 4:236058/1‑151 (MQ=255)
ccAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATc > 8:540720/1‑151 (MQ=255)
cAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCGATGAAGGTATc > 4:455117/1‑150 (MQ=255)
cAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATc > 6:1373890/1‑150 (MQ=255)
cAGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATc > 8:597198/1‑150 (MQ=255)
aGTACTACATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCat < 1:418759/151‑1 (MQ=255)
tactacATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCatg > 2:583888/1‑150 (MQ=255)
aCTACATCTCCACCCACGGTGCTCGTAAGGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCatgat < 2:320592/151‑1 (MQ=255)
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TGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCATGAT > NC_000913/4187520‑4187814
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
