Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I5 R1
|
18 |
424.9 |
13427302 |
97.8% |
13131901 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,278,051 |
G→A |
Q63* (CAG→TAG) |
yejG ← |
uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,278,051 | 0 | G | A | 97.7%
| 1252.2
/ 10.2
| 343 | Q63* (CAG→TAG) | yejG | uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (5/3); new base A (161/173); total (166/177) |
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
Only 100 of 343 total aligned reads displayed.
GTAGTTTGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTGGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGATAGTTCTG > NC_000913/2277905‑2278198
|
tAGTTTGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCtt > 3:783876/1‑150 (MQ=255)
aGTTTGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCtt > 2:617549/1‑149 (MQ=255)
aGTTTGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCtt > 2:440344/1‑149 (MQ=255)
aGTTTGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTa < 3:477137/150‑1 (MQ=255)
tttGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGtt > 7:59316/1‑151 (MQ=255)
tGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCATTCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACCGGCACGGCTCCCCTTCACACTCCCGCCCCGAAGATGGCACTTCGATGTCGGTTAACGCCTAGCTTAGttt > 4:1517588/1‑150 (MQ=255)
tGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGttt < 2:703105/150‑1 (MQ=255)
aaaGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATAc < 7:383457/151‑1 (MQ=255)
aaaGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATAc < 5:854465/151‑1 (MQ=255)
aaGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACa < 2:1346266/151‑1 (MQ=255)
aaGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACa < 8:182777/151‑1 (MQ=255)
aGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTGGCTTAGTTTATACAt > 1:450828/1‑151 (MQ=255)
aGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACAt > 2:118428/1‑151 (MQ=255)
gTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCAc > 3:1210107/1‑151 (MQ=255)
gTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCAc < 6:1138203/151‑1 (MQ=255)
gcGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCg < 4:110032/150‑1 (MQ=255)
cGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCg < 5:1670992/150‑1 (MQ=255)
cGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCg > 5:613515/1‑150 (MQ=255)
gCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGAcc > 1:854074/1‑151 (MQ=255)
gCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGAcc > 5:1199853/1‑151 (MQ=255)
cAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGAcc > 1:994349/1‑150 (MQ=255)
aTTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATg > 2:1305082/1‑151 (MQ=255)
ttGCCACACCAAAATTTTTCAATCGCCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACACCAGCACCGAACAAGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGCCCATGc > 8:454778/1‑151 (MQ=255)
tGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGc < 4:575705/150‑1 (MQ=255)
gCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCa < 6:1431498/150‑1 (MQ=255)
acacCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTAt < 4:801635/151‑1 (MQ=255)
cacCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATc > 6:648055/1‑151 (MQ=255)
ccAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCAc < 5:560812/151‑1 (MQ=255)
aaaaTTTTTAAATAGGCATGTTGAAGCAAACTCGTCCTGGAGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACTCCTAGCTTAGTTTATACATCACCGACCATGCATTATCAccc > 6:762539/1‑150 (MQ=255)
aaaTTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCAt > 3:1549201/1‑151 (MQ=255)
tttttCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCg > 1:1579983/1‑151 (MQ=255)
tttCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCggg > 8:1434849/1‑151 (MQ=255)
ttCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCggg < 8:908001/150‑1 (MQ=255)
tCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCt > 3:834034/1‑151 (MQ=255)
aaTCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTaa < 4:379267/151‑1 (MQ=255)
cGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTTTCACCATCCGGGCTAAGc > 7:1340769/1‑150 (MQ=255)
cGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGc < 1:1437253/150‑1 (MQ=255)
cGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGc > 8:1144276/1‑150 (MQ=255)
cGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCa < 4:1426867/151‑1 (MQ=255)
cATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAAtt < 7:801447/151‑1 (MQ=255)
gTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTaa < 8:1015886/151‑1 (MQ=255)
tGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAg < 5:783301/150‑1 (MQ=255)
gcagcaAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCTACCATGCATTATCACCATCCGGGCTAAGCAATTTAAgcg > 6:1590815/1‑151 (MQ=255)
cagcaAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAgcgc > 3:206219/1‑151 (MQ=255)
caAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGccac > 3:99145/1‑151 (MQ=255)
aaaCTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGccacc > 2:1414636/1‑151 (MQ=255)
aaaCTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGccacc > 6:1284555/1‑151 (MQ=255)
aaaCTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGccacc > 1:1200678/1‑151 (MQ=255)
cTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAgg > 5:1461367/1‑151 (MQ=255)
tCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGc > 4:704977/1‑151 (MQ=255)
cGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAgg < 2:992187/149‑1 (MQ=255)
gTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCtg > 5:960242/1‑151 (MQ=255)
ccTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGGTTAGTTTATACATCACCGACCTTGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCtgtt < 1:1132667/151‑1 (MQ=255)
ccTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCtgt < 4:227286/150‑1 (MQ=255)
gCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCa < 3:673278/151‑1 (MQ=255)
cGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCAc > 1:61473/1‑151 (MQ=255)
aaaCAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGt > 2:768582/1‑151 (MQ=255)
aaaCAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGt > 4:114457/1‑151 (MQ=255)
aCAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAAGTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTcc > 6:497242/1‑151 (MQ=255)
ggCACCGCTCACCTTCACACTCCCGCACCGAAGATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCTCCACCAGGCTGTTGTCACCGCACGGTCCAtt < 4:1651637/151‑1 (MQ=255)
gCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCAttt < 8:1270806/151‑1 (MQ=255)
cGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGc < 8:829351/151‑1 (MQ=255)
cGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGGTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGc < 2:298501/151‑1 (MQ=255)
gCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGccg > 5:342449/1‑149 (MQ=255)
ccTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCg < 5:736793/151‑1 (MQ=255)
ttCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTGGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCAcc < 6:1031149/126‑1 (MQ=255)
tCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGt < 6:200432/150‑1 (MQ=255)
cacaCTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGtt < 7:1558090/150‑1 (MQ=255)
acacTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCa < 3:965791/151‑1 (MQ=255)
acTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAAc < 8:566990/151‑1 (MQ=255)
ccAGCACCGAACATGGAACTTCGATGTCGCTTAACTCCTAGCTTAGTTTATACATCACCGACCATGAATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGTTTCAACCtt < 3:1429532/151‑1 (MQ=255)
cAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTc < 8:1054066/151‑1 (MQ=255)
cAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTc < 2:1136428/151‑1 (MQ=255)
cAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATCCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTc < 7:167914/151‑1 (MQ=255)
aGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTcc > 6:1106686/1‑150 (MQ=255)
gCACCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCg > 7:1630815/1‑150 (MQ=255)
aCCGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAAc > 3:1624409/1‑151 (MQ=255)
ccGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATT‑TCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCt < 3:1130532/151‑1 (MQ=255)
cGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCt < 6:372438/151‑1 (MQ=255)
cGAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCt > 4:132776/1‑151 (MQ=255)
gAACATGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTg < 8:1498689/151‑1 (MQ=255)
aTGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGa > 3:436934/1‑150 (MQ=255)
aTGGAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGa > 1:49653/1‑150 (MQ=255)
ggAACTTCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAAc > 5:289980/1‑151 (MQ=255)
tCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACcagca < 7:1315405/150‑1 (MQ=255)
tCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACcagca < 1:358696/150‑1 (MQ=255)
tCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACcagca < 1:569390/150‑1 (MQ=255)
tCGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACcagc > 8:3391/1‑149 (MQ=255)
cGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACcagc > 2:540533/1‑148 (MQ=255)
cGATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGa < 8:1375194/151‑1 (MQ=255)
gATGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGAc > 5:123002/1‑151 (MQ=255)
tGTCGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGAcc > 4:34535/1‑150 (MQ=255)
ggcGCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCa < 2:880007/148‑1 (MQ=255)
gTCGCTTAACGCCTAGCGTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAg < 7:1395293/151‑1 (MQ=255)
gCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCg > 2:1609659/1‑150 (MQ=255)
gCTTAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGa < 6:923247/151‑1 (MQ=255)
ttAACGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGAt > 7:1308945/1‑150 (MQ=255)
aaCGCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGATAGt > 3:1474263/1‑151 (MQ=255)
gCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGATAGTTCt < 5:1053361/151‑1 (MQ=255)
gCCTAGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGATAGTTCt < 1:1008280/151‑1 (MQ=255)
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GTAGTTTGAAAAGGGTTCGGCAATTGCCACACCAAAATTTTTCAATCGGCATGTTGCAGCAAACTCGTCCTGGCGATTTACAAACAGGCACGGCTCACCTTCACACTCCAGCACCGAACATGGAACTTCGATGTCGCTTAACGCCTGGCTTAGTTTATACATCACCGACCATGCATTATCACCATCCGGGCTAAGCAATTTAAGCGCCACCAGGCTGTTGTCACCGCACGGTCCATTTTGCGGAATCGGTTCAACCTTCGAACCTGCGAAACCAGCAGACCAGCGATAGTTCTG > NC_000913/2277905‑2278198
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
