Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F91 I7 R1 13 139.5 2546366 90.0% 2291729 287.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,073,641 C→A intergenic (‑70/‑98) yihU ← / → yihV 3‑sulpholactaldehyde (SLA) reductase, NADH‑dependent; gamma‑hydroxybutyrate dehydrogenase, NADH‑dependent/6‑deoxy‑6‑sulphofructose kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,073,6410CA97.5% 507.0 / NA 157intergenic (‑70/‑98)yihU/yihV3‑sulpholactaldehyde (SLA) reductase, NADH‑dependent; gamma‑hydroxybutyrate dehydrogenase, NADH‑dependent/6‑deoxy‑6‑sulphofructose kinase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base A (81/72);  minor base T (2/2);  total (83/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 157 total aligned reads displayed.

GAACAACACGTTGCGCACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTCGCGTAGGTGATGACGACACG  >  NC_000913/4073344‑4073936
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                       
gaccaacaCGGAGCGCACCAGGTGTCCATGCGGCAACCAGGTAATGTTAATTTCGGATTCTTGAGGCTCCGGCGCCGGGTTTGCGGAGGGAGTCGAACCGTTGTCTACCAGAGGCCGCACAGCTTCGGCGGTCACGTCAAAGGCGCGAAGTGGATGCCCTTGCTGCAATAAATTCCTCGCCATTGGCGAACACATGTGTCCTAAACCGATAAACGTGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTa                                                                                                                                                                                                                                                                                                      <  1:1261969/298‑1 (MQ=255)
        cGTTGCGCACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTTTTTGTAAt                                                                                                                                                                                                                                                                                              >  2:13598/1‑301 (MQ=255)
        cGTTGCGCACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGAGTTCACATCAAAGACGCGAAGTTGATGCACTTGCTGCAATAAATTGCTCGCCATTTGAGAACCCAGTTGTCCTAAACCGATAAACGCAGTTGCTGCGATAACCCTCTCCTGAAAACAGTATAGATACTTTTTGTACTTTAATAATTGCTTCACTTGTCTGTTTTTGTTAGTTTTTTTAAt                                                                                                                                                                                                                                                                                              >  2:672609/1‑301 (MQ=255)
          ttGCGCACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTTCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTTTGACATGCTTTGTTTGTCTGTTTTTGATAGtatttttatttt                                                                                                                                                                                                                                                                                            >  1:326375/1‑301 (MQ=255)
          ttGCGCACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAAttt                                                                                                                                                                                                                                                                                            >  2:463821/1‑301 (MQ=255)
             ggtaCCAGTACGCCATTCGGTAACATGGTAATGAGACGTTCGCAAACTTGAGCGGCATGCGCCTGGTGGTCGGAGGGGGTAGCACCTTTGTCTTACGGATGACGCACAGCTACTGCGTTCACAGCCAAGACGGGAAGTTGATGCCCTTGCTGCAATAAATTGCTGGCCATTAGCGAACCCATTTGTCCTAAACCGATATACGCTATTGCTGCCATATCCCTCTCCTGAATACATTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATc                                                                                                                                                                                                                                                                                         <  1:18908/298‑1 (MQ=255)
             cgcACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATc                                                                                                                                                                                                                                                                                         >  2:517756/1‑301 (MQ=255)
                 ccAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCa                                                                                                                                                                                                                                                                                     <  2:1149355/301‑1 (MQ=255)
                  cAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGGCATTTATGACATGCTTTGCTTGGCTTTTTTTTATAGTATTTGTATTTTATCGTCa                                                                                                                                                                                                                                                                                     >  2:590668/1‑300 (MQ=255)
                         ccATTCGGCAACATGGTAATGATCAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCCCCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTg                                                                                                                                                                                                                                                                             <  1:814161/301‑1 (MQ=255)
                         ccATTCGGCAACATGGTAATGATAAATTCGGCGTCTTTGGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGGCTACCAGATGCCGAACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTg                                                                                                                                                                                                                                                                             <  1:517599/301‑1 (MQ=255)
                         ccATGCGGCAACATGGTAATGATAAATTCGGCAACTTTAGCGGCCTGCGCCGGGGTGGCGGCGGGAGTCGCACCTTTGTCTACCAGGTGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTg                                                                                                                                                                                                                                                                             <  1:814952/301‑1 (MQ=255)
                                          aaTGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGCCATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACtttttt                                                                                                                                                                                                                                                            >  2:712601/1‑300 (MQ=255)
                                             gATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTTTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTaaa                                                                                                                                                                                                                                                          >  1:384035/1‑300 (MQ=255)
                                                    tCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCAATAACCCTCTCCTGAATACAGTTATGTCAATTTTTGTCATTTACTACATGCTTTGTTTGTCTGTTTTTGATTTTATTTGTAATTTTACTTCAAAAAAtttaaatccgaaatcggaagagcgtgtggt                                                                                                                                                                                                                                                  >  1:1166561/1‑273 (MQ=255)
                                                               aGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGAACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTaaaa                                                                                                                                                                                                                                        <  2:1212573/300‑1 (MQ=255)
                                                                    ccTGCGCCGGGTTGGCTGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACg                                                                                                                                                                                                                                  <  2:251333/301‑1 (MQ=255)
                                                                    ccTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTTCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACg                                                                                                                                                                                                                                  <  2:971190/301‑1 (MQ=255)
                                                                       gcgcCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCACCTGAATACAGTTATGTCACTTTTTGTCATTTCTGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCTTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGAAt                                                                                                                                                                                                                               >  2:1095088/1‑301 (MQ=255)
                                                                                  ggcgcggGAGTCGCACCTCTGTCTCCCAGATTCCGTACCGCTTCGGCATTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAG‑TATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGttt                                                                                                                                                                                                                   <  1:1116249/298‑1 (MQ=255)
                                                                                              gCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGTTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTGTCCTGTTTTTGATAGTATTGGTAATTTATCGTCAAACAATTGACAGCCGTCACTTTTTAACTACTTGTGTAAATTAAAATAAATGCATCCCAAAACGTTTAAGGAATGAcc                                                                                                                                                                                                        >  1:242801/1‑301 (MQ=255)
                                                                                               cACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTTAAATTAAAATGAACGCATCCAAAAATGTTTAAGGACTGa                                                                                                                                                                                                          >  2:1115463/1‑298 (MQ=255)
                                                                                               cACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAAACGATAAACGCGATTGCTGCCATAACCCTCTCCTGACTACAGTTCTGTCACTTTTTTGACTTTATGACTTTCTATGCTTGTCTGTTTTTGATAGTATTTGTAATTTTTCGTCAAACAATTGACAGTCTTTCATCTTTAAACAATTTTTGAAATTAAAATAAACACATACCAAAATGTTTAAGAAAtacct                                                                                                                                                                                                        >  1:1005707/1‑296 (MQ=255)
                                                                                                      gTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAACCACTTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTct                                                                                                                                                                                                >  2:1178156/1‑300 (MQ=255)
                                                                                                        cTACCAGATGCCGCATAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGCAATTAAAATGAAAGCATCCCAAAATGTTTAAGGAATTATAATGAttatgg                                                                                                                                                                                              >  2:166498/1‑297 (MQ=255)
                                                                                                          aCCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGCCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATTATTCggttt                                                                                                                                                                                            >  2:1222015/1‑297 (MQ=255)
                                                                                                          aCCAGAGGCCGCGCAGCTTCGGCGTGCACATCAAAGACGCGAAGTTTATGCACTGGCTGCAATAAATTGCCCGCCATTGGCGAACCCAGTTGTCCTAAACCGATACACGCGATTGCTTCCATTACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCgtg                                                                                                                                                                                              <  2:517892/299‑1 (MQ=255)
                                                                                                           ccAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTAACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGATGAAATTAAAATGAACGAATCCCAAAATGTTTAAGTAATGACCATGATTCttgttg                                                                                                                                                                                           >  1:420711/1‑301 (MQ=255)
                                                                                                            aaGATGCCGCACAGCTTCGGCGTTATCTTCAAAGACGCGAAGTTGATGCCCTTGCTGAGATAAATTGCTCGCAATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTATTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGc                                                                                                                                                                                          <  2:639948/300‑1 (MQ=255)
                                                                                                               aTGCCTCACCGCTTCGGCGTTCACCTCAAGGCCTCGAAGTTGATGCCCTTTCTTCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTtg                                                                                                                                                                                       <  1:1198808/301‑1 (MQ=255)
                                                                                                                   cGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCAAAAATGTTTAAGGAATGAACATGATTCGTGTTGCtttttt                                                                                                                                                                                    >  1:1150107/1‑296 (MQ=255)
                                                                                                                        agcctcgggcattacaTCAAATACGCCAAGTTGATGCACTTGCTACAATAACTTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCAATACACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGtat                                                                                                                                                                              <  1:1094803/288‑1 (MQ=255)
                                                                                                                                 gTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATACCCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTGGCTTGTCTGTTTTTGATAGTATTGTTAAGTTATCGTCAAAAAATTTACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAAAGCATCCCAACATGTTTAAGGAATGACAATGATTCGTGTTGCTTGTGTAGGGATATcctggat                                                                                                                                                                     >  1:926052/1‑296 (MQ=255)
                                                                                                                                     acagcaacgaatcgAAGTGGATGACCGTGCTGCAATAAAGTGCGCGCCAGTGGCGAAACCATTTGGCCTCAACCGATACACTCGATTACTGCCATAACCCTCTCCTGAATACAGTTATGTCTCTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGGGTAGGTATAACCGTGATGGAt                                                                                                                                                                 <  2:292117/289‑1 (MQ=255)
                                                                                                                                      caTCAAAGACCCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATc                                                                                                                                                                <  2:13080/301‑1 (MQ=255)
                                                                                                                                      aaacAAAGACAAGCAGTTGAATCCGTTACGACAATTACTTGCAAGCCATTGGCGAACCCCATTGACCTAAACCGAGAAACGCGAATGCTGACAGAAGCCTCTCCTTACTACAGTTATGTCAATTTTTGTCATTTATGACATGCTTTGATTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATc                                                                                                                                                                <  1:588069/298‑1 (MQ=255)
                                                                                                                                       aTCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAAAGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGATGGTGTAGGTATAACCTTGATGGATCg                                                                                                                                                               >  1:206482/1‑301 (MQ=255)
                                                                                                                                        tCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTTTAGGTATAACCGTGATGGATCGc                                                                                                                                                              >  2:1073605/1‑301 (MQ=255)
                                                                                                                                          aaaGACGCGAATTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCAt                                                                                                                                                            <  2:812075/301‑1 (MQ=255)
                                                                                                                                            accaaccgctcttccgatcTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAGCGCGATTGCTGCCATAACCCTCTCCTTAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCAt                                                                                                                                                            <  1:625520/281‑1 (MQ=255)
                                                                                                                                            aGACGCGAAGTTGAGGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCAATTTGTCCTCAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCt                                                                                                                                                          <  2:926307/301‑1 (MQ=255)
                                                                                                                                                       tGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGttt                                                                                                                                                                                                                   <  2:777750/233‑1 (MQ=255)
                                                                                                                                                       tGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTTAGGGGTCCCATCTTTTAGGTggc                                                                                                                                                >  1:156791/1‑299 (MQ=255)
                                                                                                                                                          tGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAg                                                                                                                                                                                                                >  2:510700/1‑233 (MQ=255)
                                                                                                                                                          tGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCGTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAg                                                                                                                                                                                                                <  1:510543/233‑1 (MQ=255)
                                                                                                                                                           gcccttttcgcAAAAAATTGCTCGCACTTGGCGAACCCATTTGTCCTCAACCGATTAACGCGTTTTCTGACATAACCCTCTCCTGTATACAGTTATGTCACTTTTTTTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAggg                                                                                                                                            <  2:673919/291‑1 (MQ=255)
                                                                                                                                                           gCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTAGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAgggg                                                                                                                                           >  2:623001/1‑300 (MQ=255)
                                                                                                                                                            ccctaccctactctcatccggtttcATTGGCAAACCCATTTGTCCTACACCGATAAACGCGTTTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAggg                                                                                                                                            <  1:640909/275‑1 (MQ=255)
                                                                                                                                                                tgctgcAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTAcc                                                                                                                                       <  2:326469/300‑1 (MQ=255)
                                                                                                                                                                   tgcAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGATTAACCGTGATGGATGGCATCATTTACTGGGAAGGGTTACCGACg                                                                                                                                   >  2:1160123/1‑301 (MQ=255)
                                                                                                                                                                    gcAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAACATGTTTAAGGAATTACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATGGCATCTATTACGTGGACGGGTTACCGACgg                                                                                                                                  >  1:240617/1‑301 (MQ=255)
                                                                                                                                                                     cAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGTTATAACCGTGATGGATGGCATGTATTCCGTGGAAGGGGTACCGCCgg                                                                                                                                  >  1:181504/1‑300 (MQ=255)
                                                                                                                                                                              gCTCGCCATTGGCGAACCCATTTTTCCTAAACCGATAAACGGTATTTCTGCCATAACCCTCTCCTGAATAATGTTATGTTTCTTTTTTTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTa                                                                                                                         <  1:463686/300‑1 (MQ=255)
                                                                                                                                                                                 cGCCATTGGCAAAACCATTTGACCTAAACCGATAAACTCGATTGCTGACATACCCCTCTCATCGATACACTTATGTTAGTTTTTTTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTTACAGCCGTCACTTTGTAAACAATTGGTGAAATTAAAATGAACGCCTCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATa                                                                                                                     <  2:431854/301‑1 (MQ=255)
                                                                                                                                                                                    cATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGaa                                                                                                                                                                                                                                               <  2:861665/176‑1 (MQ=255)
                                                                                                                                                                                    cATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGaa                                                                                                                                                                                                                                               >  1:861418/1‑176 (MQ=255)
                                                                                                                                                                                    cATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAggg                                                                                                                                            >  2:641104/1‑275 (MQ=255)
                                                                                                                                                                                                cctctttcccctcacgactctcttcctatctgcCATAACCCTTTCCTGAATACAGTTATGTCACTTTTTGTTATTTATGACATGCTTTGCTTTTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATta                                                                                                      <  1:1087613/272‑1 (MQ=255)
                                                                                                                                                                                                    tttCCTATACCGATACACGCAATTACTGCCATAACCCTTACCTGTATACATTTATTTCTATTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTATGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATAc                                                                                                   <  1:166453/298‑1 (MQ=255)
                                                                                                                                                                                                      tCCTAAACCGTCAAACGCGAGTGCTGCCATAACCCTGTCCTGAATACAGTGATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTAATTGTAAATTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACgg                                                                                                 <  2:242882/300‑1 (MQ=255)
                                                                                                                                                                                                       ccTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACg                                                                                                                                                    <  2:722997/248‑1 (MQ=255)
                                                                                                                                                                                                       ccTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACg                                                                                                                                                    >  1:722778/1‑248 (MQ=255)
                                                                                                                                                                                                       ccTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTACTTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGACATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTCATGGATCGCATCTAGTACGTGGAAGGATTACCgctctccgtagttaacc                                                                                                                      >  2:1240088/1‑262 (MQ=255)
                                                                                                                                                                                                          taaCCGATAAAAGCGATTGCTGCCATAACCCTCTCCTGCATACATTTATGTTACTTTTTGTCATTTATGACATTCTTTGCTTGTCTGTTTTTGATAGTATTTATAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAg                                                                                              <  1:1038780/298‑1 (MQ=255)
                                                                                                                                                                                                           aaCCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGGTATGTCATTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTtg                                                                                           <  2:206554/301‑1 (MQ=255)
                                                                                                                                                                                                                 tAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATACCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATAGCTTCTATTACGTGGAAGGGTTAGCGACGGGGAGCGGTCAATACGAGGGgaagaagtgaactgctgattggggcg                                                                                     >  1:302241/1‑277 (MQ=255)
                                                                                                                                                                                                                   aaCGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAACTTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACGGACGGAGAGCGGTAAATGCGTGGAGAGAAAATATACGGAATCTGGTgggggg                                                                                   >  1:1192047/1‑301 (MQ=255)
                                                                                                                                                                                                                        gATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGTTAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGATCATTATTCGTGTTGCTTGGGTAGGTATAACCGTGATGGATCGCAACTATTACTTGGAAGGGTTACCGACGGATAGTGGTAAAGTCGTGGCGTGAAATTTGAAGGAAGTTGGTTGCGGGCCAgg                                                                              >  2:420716/1‑300 (MQ=255)
                                                                                                                                                                                                                            gcttcCATAATCCTTTCCTTAATACATTTTTGTCATTTTTTGTAATTTATGACATGCTTTGCTTGTCTTTGTTTGATAGGATTTTTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAgcggc                                                                           <  1:13596/300‑1 (MQ=255)
                                                                                                                                                                                                                             ctgcCATTACCCTCTCCTGTATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAAtt                                                                                                       <  2:801462/271‑1 (MQ=255)
                                                                                                                                                                                                                             ctgcCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAAttgactcggaagagcgtggggtagggaaag                                                                           >  1:801227/1‑271 (MQ=255)
                                                                                                                                                                                                                               gcCATCATCCTTTCCTGAATATATTTAGTTCCATTTTTGTCATTTATGATATGCTTTGCTTGTATGTTTTTTATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACg                                                                       <  1:287305/301‑1 (MQ=255)
                                                                                                                                                                                                                               gcCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAACTTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATTGATCGCATCTATTACGTGGAAGGGTTACCGACGGTGAGCGGTAAATAAGTGGAGAGAAATTAAACGTAAGTTGGTGGGGGGCGAggggggg                                                                         >  1:1036691/1‑296 (MQ=255)
                                                                                                                                                                                                                                  aTAACCATATCATGATTAAAGTTATGTTACTTTGTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTtgg                                                                                          <  2:1145609/279‑1 (MQ=255)
                                                                                                                                                                                                                                           tacTGAATAAATTGATTTCAATTTTTGTCATTTATAACATGTTTTGCTTGTCTGTTTGTGATAGTATTTGTAATTTATCGGCAAAAAATTGACAGCCGTCAACTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTgc                                                            <  2:302334/298‑1 (MQ=255)
                                                                                                                                                                                                                                            acgaaaTACAGTTATGTCATTTTTTGTCATTTATGACGTGCGTTGCTTGTATTTTTTTTATAGTATTTGTAATTTAACGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTTTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGTTGGCGGGCCAGCGGCGACGGCAGCGGTTgcg                                                           <  1:555785/296‑1 (MQ=255)
                                                                                                                                                                                                                                                 aTACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCACCGATTACGTGGAAGGGTTACCGACGGATAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGAGGCGCCGGCAGCGGTTGGggcggc                                                      >  2:376669/1‑300 (MQ=255)
                                                                                                                                                                                                                                                     cgTTCTGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGc                                                 <  2:1022988/300‑1 (MQ=255)
                                                                                                                                                                                                                                                     atttATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGGTCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGc                                                 <  2:156836/299‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttttttCACTTTTATTTATTGTTTACGTGCTTTGGTTTTCTGTTTTTGATAGTATTTGTAATTTATCGACAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAAGTAAAATGAACGCAGCCCAAAATGTTTAAGGAATGACTATGATTCGTGTTGCTTGTGTAGGTATCACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCt                                                <  1:622806/295‑1 (MQ=255)
                                                                                                                                                                                                                                                         aTGTCACTTTTTGTCATTTTAGTCTTGCTTTTCTTTGCTTTTTTTGATATTATTTTTAAGTTATCGTCAAAAAATTGACATCCGTACCTTTTGAAACAATTGGTGAAATTAAAATGAACGCAGCCCAAAATGTATAAGGAATGACCAGGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTggg                                             <  1:712383/301‑1 (MQ=255)
                                                                                                                                                                                                                                                           gTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCGATTACGTGGAAGGGTTACCGACGGAGAGGGGTAAATACGGGGCGAGAAATTATACGGCAGTCGGTGGCGGGCCGGCGGCGACGGGAGCGGTTGGGGGGGGAAGGcagagcg                                           >  1:1022713/1‑295 (MQ=255)
                                                                                                                                                                                                                                                              aCTTTTTGTCATTTATGACATGCTTTGCTTGTTTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTGTTTAAACAATTGGTGAAATTAAAATGAACGTATCCCAAAATGTTTAAGTAATGACCATGATTCGTTTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGt                                                                                                                          <  2:877154/219‑1 (MQ=255)
                                                                                                                                                                                                                                                              aCTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGACCGAAACTATTACGTGGGAGGGTTACCGACGGAGTGCGGt                                                                                                                          >  1:876905/1‑219 (MQ=255)
                                                                                                                                                                                                                                                               cTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGGGGCGAGAAATTATACGGAAGTGGGTGGGGGGCCAGGGGCGAGGGGAGGGGTTGGGGGGGGAAGGCgggggggggg                                       >  1:654890/1‑297 (MQ=255)
                                                                                                                                                                                                                                                                  tttGTCATTTATGACATGCTTTGCTTGTTTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAgg                                     <  2:240698/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAACAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCCTCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACTGCGAGCGTTATCTACGTGGCGAGAACTCATCTGGTAGTTCGTGGCGGGCCAGCGGTGACGGCAGCGGTAGCGGCGTCAAGGCTGGGGGCgccggccg                                  >  2:1042601/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                     gTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAg                                                                               >  2:218713/1‑255 (MQ=255)
                                                                                                                                                                                                                                                                       aaaaacagacaagcaaagcatGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACAGACGGAGAGCGGTAAATACGTGGGGAGAACTTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGGGGTGGCAAGGCGGGGGGCGCAGGTGGagg                               >  1:1166921/21‑299 (MQ=255)
                                                                                                                                                                                                                                                                             tgactaggttttcttGTCTTTTTTTATTATGATTTGTAATTTATCGTCAAAAAAGTGACAGCCGTCACTTTTTAAACAAATTGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGCATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGTAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTAtt                          <  1:1124193/292‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  tgtttttcttttcTTTTTTTTATTGTATTTGTAATTTAACGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTc                      <  1:137407/296‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    ctttgcttGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTTAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAg                                                                                              <  1:1207846/225‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    cttagcttGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGTACCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATCCGTGGAGAGAAATTATGCGGCATTTGGTGGGTGGCCAGCGGCGACGGCAGCGGTAGCGGCGGCCAGGCGGGGGGGGCGGGGAGGTTGTATTGGTcgggg                  >  1:894941/1‑298 (MQ=255)
                                                                                                                                                                                                                                                                                      ttgcttGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTCGCGt                  >  2:633519/1‑299 (MQ=255)
                                                                                                                                                                                                                                                                                        gcttGTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCAAGCGGCGCCGGAAGCGGTTGCGGCGGCACGGCTGGGGGCGCGGGTCGATTTTGTGGGTCGCGGAGGt              >  1:290524/1‑301 (MQ=255)
                                                                                                                                                                                                                                                                                         tttGTCTTTTTTTGATAGTATTTATAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCAAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTCGCGTAGGt              <  1:376554/299‑1 (MQ=255)
                                                                                                                                                                                                                                                                                            gTCTGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGCGAGCGGTAAATACGTTGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCGGGGGGCGCAGGTCGATTTTATGTGTCGCGTATGtgttg          >  2:937612/1‑301 (MQ=255)
                                                                                                                                                                                                                                                                                               tGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATc                                                                                                                                                                >  2:1189697/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                                               tGTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATc                                                                                                                                                                <  1:1189382/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                gTTTTTGATAGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCGGGGGGCGCAGGTCGAGTTTGTTGGTCGCGTAGGTGATggcgg      >  2:393721/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                       
GAACAACACGTTGCGCACCAGATCGCCATTCGGCAACATGGTAATGATAAATTCGGCATCTTTAGCGGCCTGCGCCGGGTTGGCGGCGGGAGTCGCACCTTTGTCTACCAGATGCCGCACAGCTTCGGCGTTCACATCAAAGACGCGAAGTTGATGCCCTTGCTGCAATAAATTGCTCGCCATTGGCGAACCCATTTGTCCTAAACCGATAAACGCGATTGCTGCCATAACCCTCTCCTGAATACAGTTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAAAATTGACAGCCGTCACTTTTTAAACAATTGGTGAAATTAAAATGAACGCATCCCAAAATGTTTAAGGAATGACCATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTCGCGTAGGTGATGACGACACG  >  NC_000913/4073344‑4073936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A