Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F9 I0 R1 103 124.7 2465218 97.5% 2403587 230.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,258,996 T→G 20.8% V69G (GTG→GGG)  ychH → DUF2583 family putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,258,9960TG20.8% 135.8 / 3.8 80V69G (GTG→GGG) ychHDUF2583 family putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base T (27/32);  new base G (16/3);  total (45/35)
Fisher's exact test for biased strand distribution p-value = 3.67e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGTTACAACCCAGAAAGTTCCGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGCTGGAATTCCACGT  >  NC_000913/1258759‑1259230
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                              
tGTTACAACCCAGAAAGTTCCGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGgtg                                                                                                                                                                                                                                               >  2:534794/1‑239 (MQ=255)
    aCAACCCAGAAAGTTCCGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCg                                                                                                                                                                                                                                           <  2:1079584/239‑1 (MQ=255)
         ccAGAAAGTTCCGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGt                                                                                                                                                                                                                                      <  2:1088239/239‑1 (MQ=255)
              aaGTTCCGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACtg                                                                                                                                                                                                                                 <  2:663459/239‑1 (MQ=255)
                   ccGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATTAACAGGGGGGCGACCGTTTCTTGTggg                                                                                                                                                                                                                            >  2:920072/1‑239 (MQ=255)
                   ccGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTggg                                                                                                                                                                                                                            <  1:173120/239‑1 (MQ=255)
                   ccGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGTGTTTGCGGGCATACACAGGTGTGCGACCGTTACTGGTggg                                                                                                                                                                                                                            >  1:377152/1‑239 (MQ=255)
                           gACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGGCCGGGTTGGGGGGCCTGGACCGGGGGGCGGCCCTTACTGGGGGGGTCGCCa                                                                                                                                                                                                                     >  1:1104103/1‑238 (MQ=255)
                                        cAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGGTGGGGGGGATGATAAGGTGTGCGGCCCGTACTGGGGGGTTCGCCGCTAGGAC‑AAACGtt                                                                                                                                                                                                      >  1:607504/1‑239 (MQ=255)
                                               gcttctgtgtgcGGTAACGTGCTCAGGGGGTTGGGTCTGGTGGTAAGGGTGGTCGGCGTGGGTTATTCAATCCTCAACCAGTTACCACGGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCAGGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGccgccg                                                                                                                                                                                               <  1:527561/228‑1 (MQ=255)
                                                         taggTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCTTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAAt                                                                                                                                                                                     <  2:210010/237‑1 (MQ=255)
                                                           ggTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTTGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATc                                                                                                                                                                                    >  2:1026935/1‑238 (MQ=255)
                                                             tAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGCGGTTGCGGGCATGGAAAAGGGTGCGGCCGCTTCTGGTGGGGTCGCCCCTATGAC‑AAACGCTGcccccggggcgcgaatagcc                                                                                                                                                                                 >  1:330590/1‑225 (MQ=255)
                                                                  tGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGGACAGGTGTGCGACCGTTACTGGTGGGGTCGCCACTATGAA‑AAACGTTGCCGCCGCAGCGATAATCGCCGTCAt                                                                                                                                                                            >  2:908493/1‑239 (MQ=255)
                                                                     tCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGAACGTTACTGGGGGGGTCGGCACTATGAC‑AACAGTTTTCGCCGAAGCGCAAATCGcccgcaca                                                                                                                                                                           >  2:253881/1‑231 (MQ=255)
                                                                       aTGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGGTCGCCACTCTGGC‑AAAACTTGCCGCCGTAGCGCTAATCGCCGTCATatcca                                                                                                                                                                       >  1:594647/1‑235 (MQ=255)
                                                                         ggggTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGGCCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGGTGCGATCATCGCCGTCATAGCTAAc                                                                                                                                                                     >  2:327814/1‑239 (MQ=255)
                                                                          gggTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTa                                                                                                                                                                       <  1:380776/236‑1 (MQ=255)
                                                                              tGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAaata                                                                                                                                                                <  2:127448/239‑1 (MQ=255)
                                                                               gggTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGGTAATCGCCGTCATAGCTAACAaataa                                                                                                                                                               >  2:1227233/1‑239 (MQ=255)
                                                                                   cTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGc                                                                                                                                                            <  2:207940/238‑1 (MQ=255)
                                                                                     ggtggtAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGGCCGGGGTGGCAGGGATGAAACGGGGTGCGGCCGGTTATGGGGGGGTCGCCACAAGGTCAAAACGTGGCCGCC‑TAGCGGTAAACCACGCCGTAGCTAacaaacaaatcaga                                                                                                                                                         >  1:602891/1‑233 (MQ=255)
                                                                                     ggtggtAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGGTGGCGGGCATGAACAGGTGTGCGGCCGTTACTGGTGGGTTCGCCCCCCTGAC‑AAACATTGCCGCCGGACGGATCATCGCCGGCagtgcttcacaaaaattccgt                                                                                                                                                         >  1:165278/1‑219 (MQ=255)
                                                                                         gtAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGc                                                                                                                                                                                                                       <  2:523981/174‑1 (MQ=255)
                                                                                                tggtCGGCGTGGGGGATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCAAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGGCCCTGCTTGCGGGCATGAACCGGGGGGCGACCTGTAATGGTTGGCTCGCCACTATGAC‑AAAAGTTTCCCCCGGCGCGCTAACTTCCGGTACAGGTAACAACTAAAGCAG‑tcgtctggtcag                                                                                                                                             >  1:98850/1‑228 (MQ=255)
                                                                                                 ggtCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACcag                                                                                                                                             <  2:1029458/238‑1 (MQ=255)
                                                                                                 ggtCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGTGTTGGCGGGCATGAACAGGGGTGCGACCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAAAAAAGCAG‑TTTTCTGACcag                                                                                                                                             >  2:1192242/1‑238 (MQ=255)
                                                                                                  gtCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGGGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTTGCCACTTTGAC‑CAACGTTGACGCCGTAGCGATAATCGCCGTCATAGCTAAAAAATAATGCAG‑TTTGCTGACcagtc                                                                                                                                           >  2:571937/1‑239 (MQ=255)
                                                                                                   tCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGGGTTGGCGGGGCTGAACAGGGGTGGGACCGGTTCTGGTGGGGTTGCCACCATGAC‑AAACCGTGCCGGCGGAGCGATAATCGCCGTCCTAGCTAACAAATAATTCAG‑ttttttggcccatca                                                                                                                                          >  1:1214724/1‑227 (MQ=255)
                                                                                                     ggCGTGGGGTATTCAATCCTCAACCAGTTATCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGGATGAACAGGGGGGCGGCCGTTACTGGTGGGGTCGCCACTTTGAA‑AAACGTTGACGCCCGAGCGATAAATGCCGTCACAGCTAACAAAAAAGTCGG‑TTTGCttgcccagccgg                                                                                                                                        >  1:810781/1‑228 (MQ=255)
                                                                                                         tGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCg                                                                                                                                                                                   <  1:261164/193‑1 (MQ=255)
                                                                                                         tGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCg                                                                                                                                                                                   >  2:261164/1‑193 (MQ=255)
                                                                                                          tgggTATTCATTCCTCAACCAGTGTCCATATTTTAATATGCCCCTGTATTTCGCTCATGTTGCAGTTCTAAGTATTATGGGCGGTGCCTTTCTCCGTCTTGC‑GGGTGTCCGTGTTGGCGGGCTTGAACAGGGGTGCCGCCGTTACTGGTGGGTGCGCCGCTATTAC‑AAACGTAGCCGCCCTAGCGATAATCGCCGTCATAGCTAACAAATAAGGCAG‑TTTGCTGACCAGTCAGTTTgc                                                                                                                                    <  1:685690/237‑1 (MQ=255)
                                                                                                             gTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCt                                                                                                                                 <  1:840785/238‑1 (MQ=255)
                                                                                                             gTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCGGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCt                                                                                                                                 <  2:80949/238‑1 (MQ=255)
                                                                                                               actCAATCCTCAACCATTTACCACATTTTAATATGCCCCAGTATTTAGCACAGGGTGCAGTGCAAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCAGGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCAACTATGAG‑AAGCGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAGTAATGCAG‑TCTGCTGACCAGTCAGTGTGCGCTGa                                                                                                                               <  1:746201/236‑1 (MQ=255)
                                                                                                                   aaTCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGt                                                                                                                          <  1:820283/239‑1 (MQ=255)
                                                                                                                   aaTCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGt                                                                                                                          <  1:181735/239‑1 (MQ=255)
                                                                                                                     tCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAAACGGGGTGCGGCCGTTACTGGGGGGTTCGCCACTATGAC‑ACACGTTGCCGCCGTAACGTTAATCCCCGTCCCAGCCTACAAATAATGCAG‑GTTGCTGCCCAACCCGTTTGCGCTGACCTGTCa                                                                                                                        >  1:767769/1‑239 (MQ=255)
                                                                                                                        tCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCaa                                                                                                                       >  2:401999/1‑237 (MQ=255)
                                                                                                                          aaCCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGGGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGGTAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTTCTGACCAGTCCGGTTGCGCTGACTGGGCAAtctc                                                                                                                   >  2:1156809/1‑239 (MQ=255)
                                                                                                                               gTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAAAAGGTGTGCGGCCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGGCGCCCTAGCGGTAATCGCCGGCATAGCTAAAAAATAAAGCAGTTTTGTTGCCCAGT‑AGTTTGCGCTGACTGGGCCATCCCgga                                                                                                                >  1:347945/1‑235 (MQ=255)
                                                                                                                                 tACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACt                                                                                                              <  2:969706/237‑1 (MQ=255)
                                                                                                                                        gTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGGCCGGGTTGGCGGGCATGAACAGGGGTGCGGCCGGTTCTGGGGGGGTCGCCCCTATGAC‑AAACGTTGCCGCCGGAGCGGTAATTGCCCGCATAGCTTACAAATAATGCAG‑TTTGCTGTCCAGGCAGTTTGGGCTGGCTGGTGAATATCTGACTTTTAAATc                                                                                                      >  1:718775/1‑238 (MQ=255)
                                                                                                                                                   cccAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGCGGGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑cgcc                                                                                           >  2:392383/1‑238 (MQ=255)
                                                                                                                                                   cccAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑cgccg                                                                                          >  2:523533/1‑238 (MQ=255)
                                                                                                                                                   cccAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGGCCGGGTTGGCGGGGATTAACAGGGGTGCGACCGTTTATGGTGGGGTCGCCACTAAGAA‑CAAAGTTGCCGCCGGAGCGAGAAACGCCGGGCCAGCTAACAAATAATACCG‑TTTTCTGACACACCAATATGCGCTGGATGGGCAAACTCGCACTTGGAAATCCACCAC‑caccg                                                                                          >  1:295830/1‑238 (MQ=255)
                                                                                                                                                   cccAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCCTGTTGGCGGGCCTGAACCGGTGTGCGGCCGTTACTGGTGGGTTCGCCCCCATGAC‑AAACGGTGCCGCCCTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTTCTGACCAGTCAGTTTTCGGTCACTTGTCAATCTCGTACTTTTAAAACCCCCCT‑cccccc                                                                                         >  1:113632/1‑237 (MQ=255)
                                                                                                                                                         aTTTCGCACATGGTGCGGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGcgac                                                                                    <  1:633972/238‑1 (MQ=255)
                                                                                                                                                         aTTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCcgcgcg                                                                                      <  1:534794/236‑1 (MQ=255)
                                                                                                                                                                  aTGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGGGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCCTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTTACTGGGCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGgaa                                                                          >  2:277615/1‑239 (MQ=255)
                                                                                                                                                                            gCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAgg                                                               <  2:605446/239‑1 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCACGCGt                                                            >  2:70804/1‑238 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGGCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGATTGCGCTGACTGGGCAATCTCGTACTTATAAATACGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCgg                                                            >  2:1085777/1‑237 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGGGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGGTAATCCCCGCCATATCTAAAAAAAAATGCAG‑TTTTCTGGCCAGTAAGGTTTCGCCGGCTGGGCAATCTCGTACTTCTTAATCCCCCAA‑CCCCCCGCCACGGATCGGGGAAGAC‑Gcccagccg                                                            >  1:975333/1‑232 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGCGTGCGACCGTTACTGGGGGGGTCGCCCCTATGAC‑AAACGTTGCCGCCGGAGCGATAATGGCCGGCCTAGCTAACAACTTAAACCG‑ATTGCTGACCCAGCAGTTTGCCCTGACTGGGCAATCTCGCACCTTAAAATCCGCCCTACGCCGCCGGCGGATGCGGG‑AGAAC‑Gcccgtggg                                                            >  1:571497/1‑232 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGCGGGCGACCGGTACTGGTGGGTTCGCCCCTATGAC‑AAACGCTGCCGCCGCAGCGACAATCTCCGTCTTACCTAACAAATAATGAAG‑TTTTCTGCCCAGACACTTTGCGCTGACTGGGCAATCTCGTACTTATAAATCCGCCCT‑CGCCGCGCGACGAATCGGGCAAAAC‑GCCAcgcgc                                                            >  1:399889/1‑237 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAAAGTTGCCGCCGTAGCGATAATCGCCGGCCTAGCTAAAAAATAAAGCAG‑TTTGCTGACCAGTACGTTTGCGCTTACTGGTCAATCTCGTACTTTTAAATCCGCCCT‑CCCCCCGCGCCAGTTCGGGGAGGAA‑GCCAGGCGt                                                            >  1:888734/1‑238 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGGGTTGGGGGGGATGAAGAGGTGGGCGACCGTTACTGGGGGGTTGGCCACTATGAC‑AAACGTTGCCGCCGGAGCGATAATCTGCGTCATAGCCAACACAGCATGGAA‑GTTGCTGACCAGGTAGGTTTCGGTGACTGGGCAAATTCGTCCTTATAAATCCGCCAA‑CGCCGCGCGAGGAGTTGGGGAGTAc‑ccccgagcg                                                            >  1:1125457/1‑232 (MQ=255)
                                                                                                                                                                                aGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGGGTTGGCGGGCATGAACCGGGGTGCGGCCGTTTCTGGGGGGGTTGCCCCTATGAC‑AAACGTTGCCGCCGCAGCGATAATCGCCGTCATAGGTCAAAAATAATGGCG‑TTTTGCGACCAGGCAGTTTTCGCTGACTGGGTACACTCGTCATTATAAATCACCCAC‑CGCCCCGCGACGCTTCTGGGAGAAC‑CCCCGGCGt                                                            >  1:97874/1‑238 (MQ=255)
                                                                                                                                                                                     tttCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGGCCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGGCAATCTCGTACTTATAAAACCGCCAT‑CGCCGCGCGACGATTTGGGAAGAAA‑GCCCGGCGGCCCggg                                                      >  1:71934/1‑239 (MQ=255)
                                                                                                                                                                                     tttCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGGAGCGATAATCGCCGTCCTAGCTAACAAAAAATGCAG‑TTTGCTGGCCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGCCGACTCGGGGAGAAC‑GCCAGGCGTCCCcgg                                                      >  1:84326/1‑239 (MQ=255)
                                                                                                                                                                                     tttCGTCGGTGCCATTCTCTGGCTGGC‑GGGGGCCCGTGTTGGCGGGCCTGAAAAGGTGGGCGAACGTTACTGGTGGGGTTGCCCCTATGAC‑AAAAGGTGCCGCCGGAGGGATAATTGGCGTCCTAGCTAACAAATTATGCAG‑TTTGGTGACCAGGCAGTTTGCGCTGACTGGTCACTCTCGGCCTTTTAAATCCGCACT‑CCCCGCGCGACGGTTCGGGAAGAACGGCCAGG‑GTTCCggg                                                      >  1:1060947/1‑239 (MQ=255)
                                                                                                                                                                                       tcgtcgGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGCTTCCGGAAGAAC‑GCCCGGCGTCCCgggg                                                     >  2:1024427/1‑237 (MQ=255)
                                                                                                                                                                                            ggTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGtt                                               <  2:768997/239‑1 (MQ=255)
                                                                                                                                                                                            ggTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGGGTGCGACCGTTACTGGGGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGGTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGtt                                               >  2:1222270/1‑239 (MQ=255)
                                                                                                                                                                                              tGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTTGCGGGCCTGAAAAGGTGTGCGACCGTTACTGGTGGGGTCGCCCCTATGAC‑AAAAGTTGCCGCCGCAGGGAAAATCGCCGGCAGAGGTAACAAAAAATACAG‑GTTGGTGGCCAGCCAGTTTGCCCCGACTGGTCAATATCGTACTTTTAAAACCGCCCT‑CGCCGCGCGGCGGTTCGGGGAGACC‑GCCCCGCGGCCCGGGATCGGGTgg                                             >  1:406783/1‑238 (MQ=255)
                                                                                                                                                                                                    tctcTGGCTGGC‑GGGTGCCCGTGTGGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCa                                       <  1:1192242/239‑1 (MQ=255)
                                                                                                                                                                                                      tctGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAgc                                     <  2:210707/239‑1 (MQ=255)
                                                                                                                                                                                                      tctGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAgc                                     <  2:858322/239‑1 (MQ=255)
                                                                                                                                                                                                      tctGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAgc                                     <  2:1062067/239‑1 (MQ=255)
                                                                                                                                                                                                      tctGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGGGTGCGACCGTTACTGGGGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAgc                                     <  1:401999/239‑1 (MQ=255)
                                                                                                                                                                                                       ctggctggCGGGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAgc                                     <  1:392383/239‑1 (MQ=255)
                                                                                                                                                                                                                   gTGCCCGGGTTGGCGGGCATGAACAGGGGTGCGACCGTTACTGGTGGGGTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCCCGTACTTATAAATCCGCCCT‑CCCCGCGCGACCAATCGGGAAGAAC‑GCCCGGCGTCCCGGGGTCGGTTGAATGCCACGCCGAGCCacaat                         >  1:470169/1‑235 (MQ=255)
                                                                                                                                                                                                                       ccGTGTGGGGGGGCAGTAACAGGTGTGCGCCCGTTACGGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTgcgc                     <  1:1156809/239‑1 (MQ=255)
                                                                                                                                                                                                                           gtTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTg                 >  2:844323/1‑239 (MQ=255)
                                                                                                                                                                                                                             tGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGc               <  2:325441/239‑1 (MQ=255)
                                                                                                                                                                                                                             tGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGc               <  2:232445/239‑1 (MQ=255)
                                                                                                                                                                                                                             tGGCGGGATTGAACAGGGGTTCTACCGTTACTGGGGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGc               <  1:1227233/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aTGAACAGGTGTGCGACCTTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGCTGGAATTc       <  2:602891/239‑1 (MQ=255)
                                                                                                                                                                                                                                          aaGGTGTGCGACCGTTACTGGTGGTTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGCTGGAATTCCACGt  <  1:277615/238‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                              
TGTTACAACCCAGAAAGTTCCGGAGGTGACATATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGC‑GGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC‑AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAG‑TTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCAT‑CGCCGCGCGACGATTCGGGAAGAAC‑GCCAGGCGTCCCGGGATCGGTTGAATGCCAGCGCGAGCCATAGTGCGCAGTGGCTGGAATTCCACGT  >  NC_000913/1258759‑1259230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A