Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F18 I0 R1	274	115.5	2655328	86.7%	2302169	226.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,435,725	C→A	18.0%	intergenic (‑106/+35)	uspF ← / ← ompN	stress‑induced protein, ATP‑binding protein/outer membrane pore protein N, non‑specific

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,435,725	0	C	A	18.0%	188.6 / 5.5	77	intergenic (‑106/+35)	uspF/ompN	stress‑induced protein, ATP‑binding protein/outer membrane pore protein N, non‑specific
Reads supporting (aligned to +/- strand): ref base C (57/5); new base A (2/13); total (59/18)
Fisher's exact test for biased strand distribution p-value = 4.21e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGT  >  NC_000913/1435488‑1435953

cAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCa                                                                                                                                                                                                                                      >  2:263386/1‑239 (MQ=255)

   tGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGaa                                                                                                                                                                                                                                   >  2:1112888/1‑239 (MQ=255)

     aaGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGaaaa                                                                                                                                                                                                                                 >  2:867975/1‑239 (MQ=255)

     aaGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAAAAAGCAGaaaa                                                                                                                                                                                                                                 >  1:148608/1‑239 (MQ=255)

           ttACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑ccc                                                                                                                                                                                                                           >  2:703732/1‑238 (MQ=255)

             aCCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCCTAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGACCGT‑TGACACTTTTTGTGT‑AATGACGGGGTTCCCATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAAAAAACAGAAAAAG‑cccccc                                                                                                                                                                                                                        >  1:603374/1‑239 (MQ=255)

             aCCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTGTCCGAATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCCAA‑AGAGGAAGAATAAGCAGAAAAAG‑CCCGcc                                                                                                                                                                                                                        >  1:756970/1‑239 (MQ=255)

                 acAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACAATTTTTGTGT‑ACTGACGGAGTTCCAGTTTTT‑AAT‑TTAGAACAAA‑GGAGGAAGAATAAAAAGaaaaaaacaccaatac                                                                                                                                                                                                                     >  1:1144330/2‑228 (MQ=255)

                   aGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACa                                                                                                                                                                                                                  >  2:211675/1‑239 (MQ=255)

                                     ccaccatttttggCCTCTTCCTCATGGTGGTTAACCACGTGTGGAGTTAATTCTGAACCGAAAATATCGATAGGGAAAAGATTGGTTCTTTAAAAAAACCCTCTTTTTTTAGTACCCGAAAAAAGTGTACCGCAAGA‑TGAC‑TTTTTTGGGTAAATGGGGGAGTTCACATTTTT‑AAT‑TAAAAAAAAA‑GGAGGAAGAAAAAGCAAAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAg                                                                                                                                                                                                <  2:11755/227‑1 (MQ=255)

                                        tcaATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGa                                                                                                                                                                                               >  2:883427/1‑237 (MQ=255)

                                           aTCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAAAAGCGGGCAGGAGGATTTAGAAATGa                                                                                                                                                                                          >  1:11755/1‑239 (MQ=255)

                                                tGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGCATAAGCAGAAAAAA‑CCCCACAAAAAAGCCGGCAGAGGGATTTaaaaagaaaaaaa                                                                                                                                                                                     >  1:912271/1‑230 (MQ=255)

                                                cgcttctctcTCAACGTGGCTATCCACGTGTTGATTTAATTTTGAATGGAAATTATGGAGAGGGAAAAAAATGGTTCTGTTAAAAAACCCTCTTTTTTTAGTCTCCGAAAAAGGTTCAACCCAAAA‑AGACATTTTTAGATT‑AAGGAGGGAGTCAACATTTTT‑AAT‑TAAGAGAAAG‑GGAGAAAAAAAAACAAAAAAAAC‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAAc                                                                                                                                                                                     <  1:766441/230‑1 (MQ=255)

                                                            aaCGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGTAACTTTTTGTGT‑AATGCCGGGGTTCCCATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAAAATAAGCAGAAAAAG‑CCCGCCATAAACACGGGTGGGCGGATTTAGAACTTATAAACCACACCaaaaac                                                                                                                                                                         >  1:668631/1‑237 (MQ=255)

                                                                tGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACa                                                                                                                                                                     >  2:962956/1‑239 (MQ=255)

                                                                tGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAAAAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAACCGACa                                                                                                                                                                     >  2:981491/1‑239 (MQ=255)

                                                                  gCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAATAATCGTTCTGTTAATAAAACCTCCTGTTTTAGAATCAGCATAAAGTGGAACGCCAGA‑TGACACTTTTTGTGT‑AATGCATGCGTTCACATTTTT‑AAT‑TTAATTCCAA‑AGAGGAGAAATAAGAGAAAAAAG‑TCCGCCATAACAGAGGGCAGAAAGATGTAGAACTGATAAACCAGAACCaaaacacaaca                                                                                                                                                                   >  1:747165/1‑231 (MQ=255)

                                                                  gCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAAACCTAAAGCGACAat                                                                                                                                                                   >  2:1280502/1‑239 (MQ=255)

                                                                   caaaccACGCGTGGATTTAATCCAGAATCGGAAATACCGATAGGGACAAGAATCGTTCTGTTCATAAACCCTTGTTTTTTATTACCCGCATAAAGTGTAACGCAAGA‑GGACACTTTTGGTGT‑AATGAGGGATTTCACATTTTA‑AAT‑TAAGACAAAA‑GGAGGAAGAAAAAGCAAAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAat                                                                                                                                                                   <  2:527543/233‑1 (MQ=255)

                                                                    taatccggtgTTGATTTAATTCAGAATGGGAAATATCGATAGGGAAAAGAATCGTTTTTTTAAAAAACCCTCCTTTTTTAGTACCCGAAAAAGGTGTAACGCAAAA‑TGACATTTTTTGGTA‑AAGGACGGAGTTCACATTTTT‑AAT‑TTAGACAAAA‑GGAGGAAGAAAAAGAAAAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAatat                                                                                                                                                                 <  2:1092016/230‑1 (MQ=255)

                                                                            cgTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAAACCCAAAGCGAAAAAATAATCGGTa                                                                                                                                                         >  1:1092016/1‑239 (MQ=255)

                                                                                           gAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCa                                                                                                                                          >  2:902395/1‑239 (MQ=255)

                                                                                            aaTCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAAATGATAAACCAAACCTAAAACGACAAAATAATCGGAAAAAATGCAAATGGAAg                                                                                                                                         >  1:67846/1‑239 (MQ=255)

                                                                                            aaTCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAAAAGCGGGCAGGAGGATTTAGAACTGATAAAACAGACCTAAAGCGACAAAAACATGGGTaactgtcccttaaaaaa                                                                                                                                         >  1:635705/1‑223 (MQ=255)

                                                                                                 gAAATATCGTTAGGGACAAGAATCGTTCTGTTCATAAAACCTACTGTTTTAGTATCCGCATAAAGCGTAACGCCAGA‑TGTCACCTTTTTTGT‑AATGACGGTGTACACATTTTT‑AAT‑TTAGATCAAA‑GTAGGAAGAATCAGCAGAAAAAG‑CCCGCATTAACAGCGGCAAGGAGGATTTAGAACTGCTAAACCAGACCTAAACCGCCAATACCAACGGTAAAGATTCAAATagcagcagaa                                                                                                                                    >  1:518394/1‑235 (MQ=255)

                                                                                                      atCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAAA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAACGACAAAACAATCGGGAAAGATTCCAAAGGCAACGAAAAAgag                                                                                                                               >  1:508539/1‑237 (MQ=255)

                                                                                                            aGGGACAAGACTCGTTCGGTTTATACCACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCACA‑TGACCCTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCACA‑GGCGGAAGACTAAGCAGAAAAAG‑CCCGCCATAACAACGGGCAGGAGGATTTAGAACTGAAAAACCAGACCTAAAGCGACAATATCCTCGGTAGAAATGCCATAGGCACGGTAAAAGcaggaaaa                                                                                                                         >  1:673833/1‑232 (MQ=255)

                                                                                                            aGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGCCAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCa                                                                                                                           >  2:1238811/1‑237 (MQ=255)

                                                                                                                aCAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGC‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAC‑GGAGGACGAATAAGCAGAAAAAC‑CCCGCCATAACAGCGGGACGGAGGATTTAGAACATATAAAACAGACATAAAACGACAAAATCGACGGTAGAGAAGCAATTGCCaagcacaaactgggacacttca                                                                                                                     >  1:1302953/1‑218 (MQ=255)

                                                                                                                aCAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCa                                                                                                                     >  2:1228476/1‑239 (MQ=255)

                                                                                                                 cAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCACCTTAGAAGCTGTAACCTTct                                                                                                                     >  2:176085/1‑237 (MQ=255)

                                                                                                                         gTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAgg                                                                                                            >  2:1277367/1‑239 (MQ=255)

                                                                                                                          ttttGTTTATAAAACCTTTTTTTTTATTACCCAAAAAAAG‑GTAACGCCAAAGTGACATTTTGTGAGA‑AAGGAGGGACTTC‑CATTTAT‑AAA‑TTAAAAAAAAGGGAGAAAGAATAAGAAAAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGt                                                                                                           <  1:981491/236‑1 (MQ=255)

                                                                                                                            cTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACATCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCGGGCATCTTCATCCAACAGGTTg                                                                                                         >  2:359270/1‑239 (MQ=255)

                                                                                                                               ttCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAAAAAATGTAATCTTCATCAAACAGGGTGAtt                                                                                                      >  1:977890/1‑239 (MQ=255)

                                                                                                                                    aaccctttttttttttttATCCTCAAAAAGGGTACCGCAGGA‑GGATATTTTGTGATT‑AATGACGGATTCCTCTTTTTA‑AAT‑ATAGAACAAG‑GGAGGAATAAGAA‑CAAAAAAAGCCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTtata                                                                                                 <  1:1219598/222‑1 (MQ=255)

                                                                                                                                    aaaaCCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGAAGGAGGATTTAGAACTGACAAACAAGACCTAAAACGCCCATATCATCGGTAGAGGTGCCATTGGCAGCGTAGAAACTGGCACCTTAATCCAACAgggtactttataa                                                                                                 >  1:327259/1‑228 (MQ=255)

                                                                                                                                       ccctcatTTTTTAGTCCCCGTAAAAAGTGAAACCCAAAG‑TGACTTTTTTTGTGA‑AGTGGCGGATTCCACTTTTTA‑AAT‑AAAAACAAAA‑GGAGAAAGAAAAAGCAAAAAAAG‑ACCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTc                                                                                              <  2:259498/238‑1 (MQ=255)

                                                                                                                                         ctcctGTTTTAGTATCCGCATCAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGCAGAATAAGCAGAAAAAG‑CCCGCCCTAACACCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTTGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTAATCCAAAAGGTGGacatttaatcaaa                                                                                            >  1:259498/1‑227 (MQ=255)

                                                                                                                                         ctcctGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCaa                                                                                            >  2:487451/1‑239 (MQ=255)

                                                                                                                                         ctcctGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTACTCTTAATCCAAAAGGTTGATTTtaaaataaa                                                                                            >  1:36824/1‑232 (MQ=255)

                                                                                                                                           cctGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGCCAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGCTTTTATAGTCAACg                                                                                          >  2:92408/1‑239 (MQ=255)

                                                                                                                                           cctGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCAACGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATTTTCATCCAACAGGCTGACTTTATAGTCAACg                                                                                          >  2:663277/1‑239 (MQ=255)

                                                                                                                                                      aTCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGAGCAGGAGGATTTAGAACTGCTAAACCAGACCTAAAGAGACAATATCATCGTGAGAGATGCCCTTGGCAACGTAGAAGCGGTCACCTTCATCCAACAGGTTGATTTTATAGTGaaaaaagagggaaag                                                                               >  1:691616/1‑226 (MQ=255)

                                                                                                                                                         cGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGtt                                                                            >  2:93879/1‑239 (MQ=255)

                                                                                                                                                         cGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGtt                                                                            >  2:16498/1‑239 (MQ=255)

                                                                                                                                                         cGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGtt                                                                            >  2:203435/1‑239 (MQ=255)

                                                                                                                                                         cGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAACCGACACTATCATCGGTAGAGAAGCCATTTGCACCCTACAAGCTGTCAACTTCATCCAAAAGGTTGATTTTATAATCAACCAACGGGGACAtttt                                                                            >  1:376421/1‑239 (MQ=255)

                                                                                                                                                         cGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCA‑ACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGttt                                                                           >  2:1200866/1‑239 (MQ=255)

                                                                                                                                                         cGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACAAGACCTAAAACGACAATATCATCGGTAGAGATGCCCATGGCAGCGTAGAAACTTGCATCTTCATCCAAAAGGTTGAATTTAAAGTCAACGAAGGGGGAACTGtt                                                                            >  1:996726/1‑239 (MQ=255)

                                                                                                                                                             aaaaGTTAAACGCCAGA‑GAACATTTTGTGTGA‑AAGGGCAGAGTTAACTTTTTT‑AAT‑TAAGATAAAA‑GAAAAAAAAAAAAGAAGAAAAGG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTa                                                                        <  2:318592/238‑1 (MQ=255)

                                                                                                                                                             aaaaGGGAAACGACAGA‑GGACTCTTTTGGTGA‑AAGGACGGAGTTCAAATTAGT‑AAT‑GAAGATAAAG‑GGAGAAAGAATAAGAAAAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTa                                                                        <  2:112920/238‑1 (MQ=255)

                                                                                                                                                                  gaaaaCCCCAGA‑TGAC‑TTTTTTGTGTAAATGGCGGAGTTACAATTTTA‑AAT‑TAAAAACAAA‑GGAGGAAGAAAAAGAAAAAAAGG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTg                                                                     <  2:508539/234‑1 (MQ=255)

                                                                                                                                                                    tAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGAACTGTTTTTATTGAAAt                                                                 >  2:306574/1‑239 (MQ=255)

                                                                                                                                                                      aCGCCAGA‑TGACAATTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCCGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGAAGAAGCTGTCATCTTCATCCACCAGGTTGCTTTTAAAGTCACCGTAGGTGGACAAGTTTTTTTTGAAATAg                                                               >  1:1067460/1‑239 (MQ=255)

                                                                                                                                                                           aGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTAAAGTCAACGTAGGGGGACATGTTTTTATTGAAATAGTAAg                                                           >  2:596488/1‑238 (MQ=255)

                                                                                                                                                                            gA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAT‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTCGAGATGCCATTGGCAACGTAGAAGCTGTCATCTTCCTCCAACACGTTGATTTATAAGTCAACGAAGGTGGACAGATTTTTATTCAAATAATAAggt                                                         >  1:453442/1‑237 (MQ=255)

                                                                                                                                                                            gA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGTGGGCAGGAGGATTTAGAACTGTTAAACCAGACCTAAACAGACAATATCATCGGTAGAGTTGCCATTGGCAGCGTCGAACCGGTAATCTCACTCCAAAAGGTTGATTTAATAGTAAACGAAGGTGGACAGGTTTTTATTTAAAAAGAAAGta                                                         >  1:858304/1‑238 (MQ=255)

                                                                                                                                                                                      ttttGTGT‑AAGAGCGGATTTCATATTTTT‑AAT‑TTAGACAAAA‑GGAAGAAAATAAAGAAAAAAAAC‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAata                                                <  2:912271/239‑1 (MQ=255)

                                                                                                                                                                                       tttGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAatat                                               >  2:1210015/1‑239 (MQ=255)

                                                                                                                                                                                            ttaaatagacgAGTTCACATTTAT‑AATGTGATATAAAA‑GAGAGAAAAAAAACAAAAAAATC‑CCCGCCATAACTGCGGGCAGGAGGATTTAAAACTGAGAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCgg                                            <  1:388107/229‑1 (MQ=255)

                                                                                                                                                                                                atagtggATTTCATTTTTTT‑AA‑‑TTAAATAAAAGGGAGAAAAAAAAAAAAAAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTAt                                       <  1:204728/234‑1 (MQ=255)

                                                                                                                                                                                                aagACGGATTTCACTTTTTA‑AAT‑TTAGATAAAA‑GGAGGAAAAAAAAGCAAAAAACG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTAt                                       <  2:36824/237‑1 (MQ=255)

                                                                                                                                                                                                      gAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAAcc                                 >  2:204728/1‑239 (MQ=255)

                                                                                                                                                                                                        gTTTACATTTTTAAAT‑TTAGAAAAAA‑GGAGAAAAAAAAAGAAAAAAGAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAAcc                                 <  2:481592/238‑1 (MQ=255)

                                                                                                                                                                                                         ttCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGCTTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCACGCCAATATCGGCGTATTTAAcccaa                              >  2:698634/1‑236 (MQ=255)

                                                                                                                                                                                                         ttCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGa                              >  2:1203870/1‑239 (MQ=255)

                                                                                                                                                                                                                 ttt‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAACTAGTAAGTTGCGCCAATATAGGCGAATTTAACCAGATCTTTatc                      >  2:1174844/1‑239 (MQ=255)

                                                                                                                                                                                                                 ttt‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGAATTTAACCAGATCTTTgtc                      >  2:680864/1‑239 (MQ=255)

                                                                                                                                                                                                                      aT‑TTAGAAAAAA‑GGTGGAAAAAAAACAAAAAAACC‑CCCGTCAATAAAGCGGGCAGGAAGATTTAGAAGTGAAAAACCAGCCCTAAAGCGACAATATCATCGGTAGAGATGACATTGGCAGCGTAGAAGCTGTCATTTTCATGCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTAtcatca                  <  1:962956/239‑1 (MQ=255)

                                                                                                                                                                                                                        ttaaaaaaaaa‑GGGGAAAAAAAAAGAAAAAAAAC‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCaa                 <  2:67846/231‑1 (MQ=255)

                                                                                                                                                                                                                            gATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGAGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAAATTTTTATAATAAaaac              >  1:408133/1‑238 (MQ=255)

                                                                                                                                                                                                                                     gaggaAAAATAAGAAAAAAACG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCgg       <  2:977890/237‑1 (MQ=255)

                                                                                                                                                                                                                                        gaagaaTAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGTGCCAATATCGGCGAATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGt  >  2:1168158/1‑239 (MQ=255)

                                                                                                                                                                                                                                        gaagaaTAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTg   >  2:943356/1‑238 (MQ=255)

                                                                                                                                                                                                                                        gaagaaTAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTACAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTCTAGCCAACGTAGGCGGACATGTTTTTTTTGAAATAGTAAGTCGCGCCAACATCGGCGTATTTAACCAGATCTTTATCAAAAAAACCAACCGGGtggc  >  1:656546/1‑236 (MQ=255)

CAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATATCGATAGGGACAAGAATCGTTCTGTTCATAAAACCTCCTGTTTTAGTATCCGCATAAAGTGTAACGCCAGA‑TGACACTTTTTGTGT‑AATGACGGAGTTCACATTTTT‑AAT‑TTAGATCAAA‑GGAGGAAGAATAAGCAGAAAAAG‑CCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACACCTGCCGGGTTGT  >  NC_000913/1435488‑1435953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A