Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,317,499 |
A→G |
15.7% |
L133P (CTC→CCC) |
phnL ← |
ribophosphonate triphosphate synthase subunit, putative ABC transporter‑related ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,317,499 | 0 | A | G | 15.7%
| 230.2
/ 4.2
| 101 | L133P (CTC→CCC) | phnL | ribophosphonate triphosphate synthase subunit, putative ABC transporter‑related ATPase |
| Reads supporting (aligned to +/- strand): ref base A (33/48); new base G (11/8); total (45/56) |
| Fisher's exact test for biased strand distribution p-value = 2.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 106 total aligned reads displayed.
ACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACA > NC_000913/4317265‑4317736
|
aCAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCCCCGGAAAATGTCGATGGG‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑GGGGTGggaag > 2:320476/1‑239 (MQ=255)
cAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGGGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGTGagaag > 2:158850/1‑238 (MQ=255)
gCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGAc > 2:411574/1‑238 (MQ=255)
cTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCTCCGGAAAATGTCGATGGT‑GCCAGGGGCCCCAG‑GCGTTCCGGCCCGTTCAGG‑CGGGGGGGAAGAcgg > 2:271544/1‑238 (MQ=255)
cTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGAcg‑c > 2:583663/1‑239 (MQ=255)
cTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGGGGGAAGAcg‑c > 2:160064/1‑239 (MQ=255)
cTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCAATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGGGGGAAGAcg‑c > 2:869572/1‑239 (MQ=255)
tttgTCACGGAAGTGGCCCACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCCCCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGAcg‑c < 2:638001/235‑1 (MQ=255)
cGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGGTAAAGCCGCGGGCGAGGTTAACGCGCTGCTGTTCGCCCCCGGAAAATGTCGAGGGG‑GCCAGGTGCCCCAG‑GCGTTCCGCCACGTTCAGG‑GGGGGGggaagcagcccg > 1:863061/1‑232 (MQ=255)
cGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGGGAAGAcg‑cggg > 2:115481/1‑237 (MQ=255)
aaGCTGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGGGAAGACG‑CGCGGCTTTAg < 2:1076198/238‑1 (MQ=255)
aTGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGGAGGTTCGTCAAGCGGCAGAATGGGGTCGTCGACGAAAAAGCCGCGGCCGGTGGTGACGCGCTGCCGTTCGCCACCGGAAAATGTCGAGCGG‑GCCAGGTGCCCCAG‑GCGTTCCGCACCGGTCAGA‑CGGGGGAGAAAAAG‑CGCGGGGTTAggggg > 1:651921/1‑238 (MQ=255)
tGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGAGTTTAGCGCGCGGCGGTGCCCCCCCGGAAAA‑GTCGGTTGTGGCCAGTTGCCACAG‑GCGTTCCGGCCCGTTCGGGCCGGGTGggaagcgagcgggttagcgggcc > 1:852285/1‑221 (MQ=255)
gtccTCCGATGGCGGCGCCCGGGTTTTTGGTTTCGTGAAGCAGTTCCACCACCGCGGCGCTGTTTGTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAgcggcg < 1:969073/237‑1 (MQ=255)
gCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGTGGGAAGACC‑CGCGGCTTTAGCGgcgc > 2:382376/1‑239 (MQ=255)
gCCTACGATGGCTGCGCCAAGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGGGCTGTTTTTGGCGTCCAGCGGGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAtcgtcga < 2:1272389/239‑2 (MQ=255)
ccTGCGAGGGCGGGGCCTCGGGTTTGGGCTTCGCGAAGCAGGTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAgcggcg < 2:237450/237‑1 (MQ=255)
cGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGGTAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGGGCGAAGCCG‑CGCGGTGTTAGCCGCGCGGGCt > 2:798132/1‑239 (MQ=255)
cGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGGAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGAGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGc > 2:411100/1‑238 (MQ=255)
cGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGAAGGTTCGTCAAGCAGCAGAATGGGGGAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGG‑GCCAGGTGCCACAG‑GGGGTCCGGCACGGTCAGG‑GGGGGGAGAAGACG‑CGCGGCGTTAGGGGGGCggggg > 1:1105164/1‑237 (MQ=255)
cTGCGCCACGGGTTTGGGCTTCGCGAATCAGTTCCACCCCCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCAcg < 2:1105571/238‑1 (MQ=255)
gcgcCAGGTGTTTTGGCTTCGCGAATCAGTTCCCCCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑gg < 2:1105164/239‑1 (MQ=255)
gcgcCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑gg < 2:1072801/239‑1 (MQ=255)
cgcCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGG‑GCCAGGTGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGa > 2:723475/1‑239 (MQ=255)
cgcCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGG‑GCCAGGGGCCACAG‑GCGTTCCGGAACGTTCAGG‑CGGGTGAGAAAACG‑CCCGGCTTTAGCGCGGCAGGCTTCACCC‑GGa > 2:422805/1‑239 (MQ=255)
ttGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGGGGGAAGACG‑GGCGGCTTTACCGGCGCCGGGTTCACGC‑GGAACGCCgggttg > 2:19176/1‑235 (MQ=255)
ttgcgcaaTCGGTTCCCCCCCCCGGGCGTTGTTTTTGGCGTCCCGCGAGGCGGTAGGTTCGGTAAGCAGGAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGGTGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGagc < 1:382376/232‑1 (MQ=255)
cgcgAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGGATCGagcagc > 2:933021/1‑239 (MQ=255)
cgcgAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGGGGGAAGACG‑CGCGGGTTTAGCGGCGCAGGCTTTACGC‑GGCACGCCGGTATCGggcgac > 2:590109/1‑236 (MQ=255)
cgcgAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGG‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGGAGACG‑CGCGGCTTTAGCGGCGCAGGCTTTACGC‑GGGACGCCGGGAttgggccgc > 2:141719/1‑231 (MQ=255)
ccgTTCCCCCCCCGCGGGGCGTTTTTTGGGGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGGCGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGGCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCa < 1:1046051/237‑1 (MQ=255)
cAGTTCCCCCACCGCGGCGGTTGTTTTGGGGTCCGGGGAGGCGGGAGGTTCGGCAAGCAGCTGAAGGGGGTAGACGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCTGGTGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCa < 1:59350/239‑1 (MQ=255)
ccccccccGCGGGGCTTTTTTTGGCGTCCAGGGAGGGGGTGGGTTCGGCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATcacc < 1:411574/233‑1 (MQ=255)
ccaccGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CCCGGCTTTATCGGCGCAGGCTTCACTC‑GGAACGCCGGTATCGGGCAGCGGCTGCATcaccac > 2:838732/1‑238 (MQ=255)
ccGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCAACG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCCCGC‑GGAAAGCCGGTATCGGGCAGCGGCGGCATCACCCCTTcc > 2:868367/1‑239 (MQ=255)
ggcggggtttgttttGGTGTCCAGGGGGGTGGTGGGGTCGTCAGGCAGCAGGATGGGGTACGCGACGATAAAGCGGCGGGCGATGGTGAGGCGTTGCTGTGCGCCACCGGAAAATGTCGATGGT‑GCCCGGTGCCACAG‑GCGGTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCGCCACTTCCa < 1:731584/228‑1 (MQ=255)
cgaggcgCTGTTTTTGGCGTCCAGCGGGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCa < 2:729830/236‑1 (MQ=255)
gcggcgCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCCGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGGGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGGGGGAGGGCGCCGCGCTTTTCGGGGCCCGCGCTTCCCG‑‑GGAACCCCGGGACCGagcacgggcgccaccaccccgcccgg > 1:209740/1‑217 (MQ=255)
gcggcgCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCGAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTATCGGCGCAGGCTCCCCTC‑GGGACGCCGGGATCGCGGCGCGGGCGACTCACCACTTcccg > 1:1027758/1‑237 (MQ=255)
gcggcgCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGGGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAg > 2:726760/1‑239 (MQ=255)
gcgcTGTTTTTGGCGGCCAGGGGGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGGCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGc < 1:726760/239‑1 (MQ=255)
gtgtttgttGGCGTACAGGTGGGCTGTAGGTTCGTGAAGCGGGACGAGGGGGGGGTCGACGATAGAGCCGCGGGAGATGTGGACGGCGTGCTGTTCGCCCCCGGAAAAGGTCGATGGT‑GCCAGGTGCCACAG‑GGGTTCCGGCACTTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCt < 1:719581/231‑1 (MQ=255)
gcTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTg < 2:850356/239‑1 (MQ=255)
gTTTTTGGCGTCCAGGGAGGCGGTAGGTTCGTAAAGCCGCAGAAGGGGGTAGTCGACGATAAAGCCGGGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTgag < 2:651921/238‑1 (MQ=255)
gggggggggggtgtgTCAAGCAGCAGAATGGGGTAGCGGACGATAAAGCGGCGGGCGAGGGTGACGCGCTGCTGTTCGCCACCGGAAAATGGCGAGGGT‑GCCAGGGGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAcgcg < 1:33412/225‑1 (MQ=255)
ggggCGGTAGGTTCGTCAAGCGGTAGAATGGGGTAGTCGACGATAAAGCCGGGGGCGATGTTGACGCGGTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAcgc < 2:711257/236‑1 (MQ=255)
gggCGGTAGGTTCGGCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAcgcg < 2:107221/237‑1 (MQ=255)
gTAGGTTGGGAACGCAGCAGAATGGGGTAGTCGACGATAAGGGCGCGGGCGATTTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGaaa < 1:211262/239‑1 (MQ=255)
cGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCCCCGGAAAATGTCGATGGG‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTGCAGG‑CGGGTGAACAAGCG‑CGCGGCTTTAGCTGCGCAGGCTTCCACC‑GGAACGCCGAGATCCAGCAGCGGCTGCATCCCACCTTCCAGGGGTGGGATACGCGGGCAGGCGCGCCGaacagagcc > 1:758046/1‑231 (MQ=255)
tCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAAGGTCGATGGG‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGGGAGTAGACG‑CGCGCCTTTAGCGTCGCAGGCTTCACGC‑GGAACGCCGGGATCGAGCACCGCCGGCCGTCCAACTTCCCGGCCTGCGAAACGCCGGAAGACGCGCGGAGAcgacggaac > 1:788470/1‑231 (MQ=255)
agAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCgcc > 2:1064117/1‑237 (MQ=255)
tGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGGGATACCCGGGATGACGCGCAGAACCTGGCTCACCCAGCCGACggtg > 2:150977/1‑239 (MQ=255)
ggTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCCGAAACTGGCTCACCCAGCCGACGGTGGtt > 2:275882/1‑239 (MQ=255)
tAGTCGACGATAAAGCCGCGGGCGATGTTGACGAGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGGGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGTGAGAAGGCG‑CGCGGCTTTAGCGGCGCCGGCTTCCCAC‑GGCACCCCGTACTCGGCAAGCGCCTCCACACCCACTTCCGTATCTGAGAAACGCGGGTAGACGCGCCGAAACTGGCTCACACACCCGACGTGGGtttt > 1:318502/1‑239 (MQ=255)
tCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGGGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGGGGGTTTGCg > 2:287509/1‑239 (MQ=255)
gacgaTAAAGCCGTGGGCGATGGTGGCGCGCTGCTGTTCGCCACCGGAAAATGGCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCgg < 2:864866/238‑1 (MQ=255)
cgaTAAAGCCGGGGGCGCTGTGAGCGCCCGTCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCTTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGAt < 2:279928/238‑1 (MQ=255)
ggCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCCCCCAGCCGACGGAGGTTTTGCGGATTTCCACCCCTTTg > 2:318124/1‑238 (MQ=255)
ggATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTgcg < 2:863061/237‑1 (MQ=255)
cggtttttccggggtgcggTGCGCCCCCGGAAAATGGCGGTGGT‑GCCAGGGGCCACAG‑GCGTGCCGGCACGTTCCGG‑CCGGTGGGAAGCCG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTgcg < 1:1054194/224‑1 (MQ=255)
cgcgCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCCCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCCCTTTGCGCG‑CTGGcgcg > 2:1312583/1‑239 (MQ=255)
cccgcttgtgTTCCCCCCCGGAAAATGTCGGAGGC‑GCCCGGTGGCACAGCGCG‑TCCGGCACGTTCAGG‑CGGGTGAGAAGGCG‑CGCGGGTTTAGCGGCCCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCGCTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGcgcg < 1:869572/231‑1 (MQ=255)
gcgcTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGcgcg < 2:620160/238‑1 (MQ=255)
aaccggctgGTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCCCGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGcgcg < 2:680948/233‑1 (MQ=255)
ctgctgTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGGGAAGACG‑CGCGGCTTTAGCGGCCCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCCGCTGCATCACCACTTCCCGTGCCGAGATACGCGGGAGGACCCCCAGAAACTGGCCCACCCCGCCCACCGTGGTTTTGCGGGTTTCCCCCACTTTGCCCC‑CCGGCGCggggc > 1:488927/1‑236 (MQ=255)
tgtggtctccccccGGAAAAGGGCGGTGGT‑GCCAGGTGCCCCTG‑GCGTTCCGGCACGTTAAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCCGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGAc < 1:320476/227‑1 (MQ=255)
tggttttCCCCCCCGGAAAAGGTCGTTGGG‑GCCCGGTGCCCCAG‑GGCGTCCGGGAGGTTCAGG‑CGGGGGGAGAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCCCGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGAc < 1:868367/234‑1 (MQ=255)
tgctgTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGa < 2:414884/208‑1 (MQ=255)
tgctgTTCCCCCCCGGAAAGTGTCGAGGGG‑GCCCGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGAc < 1:1312583/239‑1 (MQ=255)
gctgTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGAc < 2:811627/238‑1 (MQ=255)
gctgTTCGCCACCGGAAAATGGCGATGGT‑GCCGGGTGCCACAG‑GGGTTCCGGCAGGTTCGGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGGAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCCCTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGAc < 1:583663/238‑1 (MQ=255)
ctgGTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTcca < 2:1064728/212‑1 (MQ=255)
cgTTCGCAACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAg < 2:651061/238‑1 (MQ=255)
cACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGGGCAGCGGCGGCGTCCCCACTTCCAGTGCTGACATACGCGGGATGACGCGCCGAAACTGGCTCAACCAGCCGACGGTGGGTTTGGGGATTTCCACCACTTTGCGCC‑CTGGCCCGGGGCCCAGGttccc > 1:858998/1‑234 (MQ=255)
cACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGCGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGGTTTGCGGATTTCCACCACTTTGCGCG‑CTGGGGCGGGGGCCAGGTCTAc > 2:541019/1‑238 (MQ=255)
ccGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCTCGTTCAGG‑CGGGTGAGAAGGCG‑AGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCa < 2:758046/239‑1 (MQ=255)
gattgcggtGGT‑GCCGGGGGCCACGG‑GGGTTCGCGCACGTTCAGG‑CGGGTGGGAAGGCG‑GGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGt < 1:141719/230‑1 (MQ=255)
tGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGCCGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGCCGCGGTGACCAGGTCTACCCACTCGTCa > 2:108457/1‑238 (MQ=255)
gcggtGGG‑GCCAGGTTCCAGAG‑GCTGTCCGGCCCGTGCAGG‑GGGGTGGGAAGATG‑CCGGGTTTTAGCGGCGCAGGCTTCACGC‑GGAACGGCGGTATCGAGCAGCGGCTGCATCACCCCTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCAc < 1:990602/233‑1 (MQ=255)
aTGGT‑GCCAGGTGTCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCCCTTTGCGCG‑CTGGGGCGGTGACCAGGTCTACCCATTCGTCCCCgggt > 2:53209/1‑239 (MQ=255)
ggt‑gccaggtgccaCAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGtt < 2:1042795/238‑1 (MQ=255)
ctggggcaccaG‑GCGTCCCGGCCCGTGTGGG‑GCGGTGAGGAGGCG‑CGCGGCTTTAGCGGGCCCGGCGTCACGC‑GGAAGGCCGGTAGCAAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATc < 1:142907/229‑1 (MQ=255)
cgggtgccaCAG‑GCGTTCCGGCCCGGTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATc < 2:1180245/236‑1 (MQ=255)
gccaCGG‑GTGTGCCGGCAGTTTAAGG‑GGGGTGGGATGTCG‑GGCGGCTTTAGCGGCGCAGGCTGCAGGC‑GGAACGCGGGTATGGAGCAGCGGCTGCATCACCACTTCCAGTGCTTGGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTTTTTGATCTGGAt < 1:160064/238‑1 (MQ=255)
cacaG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCCTCACCCCTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCCCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCCCTTTGCGCG‑CTGGCGCGGGGACCAGGGCTACCCACTCGCCCCCGCGTTTTGTCTGGGTTTg > 1:62736/1‑239 (MQ=255)
cacaG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGCAACTGGCTCACCCAACCGACGGCGGTTTTGCGGATTTCCACCACCTTGCGCG‑CTGGCGCGGGACCCAGGGCTACCCACCCGTCCCCCCGttttgccgggatgtg > 1:347956/1‑227 (MQ=255)
caG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGAc < 2:209740/239‑1 (MQ=255)
caG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGGGACCAGGTCTACCCACTCGTCACCGGGTTTGATTTGGATTTGa > 2:142907/1‑238 (MQ=255)
gTTCCGGCCCGGACAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGGATCGAGCAGCGGCTGCATCACCACTTCCAGGGCTGAGGTACGCGGGCTGACGCGCAACAACTGGCTCACCCAGCCGACGGGGGGTTTCGGGAGTTGCACCACTTTG‑GCGACAGGCGCGGTGACACGGTCCACCCAATCGGCCCCGGGCTTGAACTggtatacaccatcg > 1:593452/1‑227 (MQ=255)
tCCGGCAAGTTCAGG‑CGGGGGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTtcgt < 2:1316376/238‑1 (MQ=255)
ccGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGGGTTTGATCTGGATTTGACCTtcgtcg > 2:1118214/1‑239 (MQ=255)
ggCACGTTCAGG‑CGGGTGGAAAGGCG‑GGGGGCTTTAGGGGCGCCGGGTTCACGC‑GGAACGGCGGTATCGAGCAGCGGCTGCATCACCACCTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCggg < 2:594762/239‑1 (MQ=255)
tccgg‑CGGGGGAGAAGGCG‑CGCGGCTTTAGGGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGGGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAg < 2:24971/236‑1 (MQ=255)
tCAGG‑GGGGGGGGAAGTCG‑CGTGGTTTTTG‑GGGGGACGGTTCCCGCGGGAACGCCGGTTTCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATTCGCGGGATGCCGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAg < 1:723475/239‑1 (MQ=255)
tCAGG‑CGGGTGAGAAGGCG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAg < 2:852285/239‑1 (MQ=255)
cAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAg < 2:488927/238‑1 (MQ=255)
cgg‑CGGGTGAGAAGGCG‑CGGGGTTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTTCGGAGCAGCGGTCTCATCGCCCACTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCGCCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGtt < 1:838732/238‑1 (MQ=255)
aGG‑CGGGTGAGAAGGCG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGtt < 2:347956/239‑1 (MQ=255)
tGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGGGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTAc > 2:1124240/1‑239 (MQ=255)
agaagaCG‑CGCGGCTTTAGCGGCGCAGGCTTCACGG‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACa < 2:62736/238‑1 (MQ=255)
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ACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGT‑GCCAGGTGCCACAG‑GCGTTCCGGCACGTTCAGG‑CGGGTGAGAAGACG‑CGCGGCTTTAGCGGCGCAGGCTTCACGC‑GGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCG‑CTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACA > NC_000913/4317265‑4317736
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
