Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,368,938 |
A→T |
11.3% |
T92S (ACC→TCC) |
fxsA → |
suppressor of F exclusion of phage T7 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,368,938 | 0 | A | T | 11.3%
| 221.5
/ 2.9
| 104 | T92S (ACC→TCC) | fxsA | suppressor of F exclusion of phage T7 |
| Reads supporting (aligned to +/- strand): ref base A (33/51); new base T (11/2); total (47/57) |
| Fisher's exact test for biased strand distribution p-value = 2.70e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 104 total aligned reads displayed.
TATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCA > NC_000913/4368704‑4369172
|
ttttttGAGTTTTCAATTTTTATTGAGGTTTCCCAGGGTTTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTCCGGAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GCGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGa < 1:559113/235‑1 (MQ=255)
atatTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGGAT‑G‑ATTAA‑AA‑GGGTTTTCCT‑GTTCATTGCT‑G‑GTTTGCT‑GCTTTTATTTC‑CGGGC‑TTTTTTACCg > 2:1312849/1‑237 (MQ=255)
atatGGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCAGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGAc < 2:614170/239‑1 (MQ=255)
tgatttttAATCTTTTTTTAGGTTGCCCATGGATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTTTATTCACGTCAGTTATCGGTAGGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCt < 1:1312849/235‑1 (MQ=255)
agaTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGTGT‑G‑ATTAA‑AA‑CTTTTTCTCT‑GGTCTGTTCT‑G‑GTTTGCT‑GCGTTTATTAA‑CGCGC‑TTTTTTACCGAcctcctt > 2:622493/1‑238 (MQ=255)
agaTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑AGGTTTCGCT‑GATCATTGCT‑G‑GGTTGCT‑GCTTTTTTTAA‑CGGGC‑TTTTTTACCGACTTCCTc > 2:1116850/1‑239 (MQ=255)
gttttCAATTTTTTTTCTGGTTGCCCATGTATTGGGGGT‑ATTGCTGGCCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATTCAGCAAAAAATGGCGGCGGGTGAAAACGCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑g < 1:1119877/237‑1 (MQ=255)
aTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGCGGCGGGGAT‑G‑ATTAA‑AA‑GTGTTTTGCC‑GTTCATTTCT‑G‑GTTTGCT‑GCTTTTCTTAC‑CCGGC‑CTTTTTTCCGACTTCCTC‑gg > 2:403166/1‑239 (MQ=255)
aTTTAAATCTTTATCCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGCCCCTCGGGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑g < 2:271037/238‑1 (MQ=255)
tttCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGCAAACCCAGCGGCGTGTGT‑G‑GATAA‑AA‑ATGGTTTGCT‑GGGCACTTAT‑G‑GGTTTCTGGCTTTTTTTTC‑GGGGT‑TTTTTTACCCGCTTcccggg > 1:189530/1‑235 (MQ=255)
tCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑GTTAA‑AA‑GGGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGgct > 2:1242092/1‑239 (MQ=255)
cAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTAtt < 2:638365/239‑1 (MQ=255)
gTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGGAG‑G‑ATTAA‑AA‑GTGGTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAA‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTAtttc > 2:681823/1‑236 (MQ=255)
gTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGGT‑G‑ATTAA‑AA‑GGGGTTCGCT‑GGTCATTGCT‑G‑GGTTGCT‑GCTTTTTTTAC‑CGGGC‑TTTTTTTCCCACTTCCTC‑GGGCTTCT‑ACTtttttttc > 2:876015/1‑236 (MQ=255)
ttctcagttttGGGGGTGTTTGCTTAACCTGTTTCTGTTTATATTCAGGTCAGTTAACGGTATGTAAAGGGGACGTAACCAGGGGTTTAAGAATGTCGTGCTGAAGCAGCAAAAAATGGCGGCGGGTGGAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTCC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTgccgc < 1:551786/230‑1 (MQ=255)
gCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAACTGGCGGCGGGGGGAAACCCAGCGCGGGGGGT‑G‑GTTTA‑AA‑GAGGTTTGCG‑GATCATTGCTGG‑GTTTTCT‑CTTTTTATATC‑GGGGT‑GTTTTTACC‑ACATCCTC‑GCgcttcacagtttttttcacgc > 1:21334/1‑223 (MQ=255)
gCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAAACCAGGGGCGGGGGG‑G‑TTTTA‑AA‑AGATTTCGGT‑GGTTATTGTC‑G‑GCTTTCTGGCTTTTTTTCC‑CGGGG‑TTTTTTCACGATTCCCCG‑GGTTTttt‑atttttatttcgcc > 1:542650/1‑234 (MQ=255)
gcaggttttttggggT‑TTTGGTGACCCCTGTGCTGGTTATTTTAACGTAGTTTTTCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTgccgc < 1:951362/226‑1 (MQ=255)
ccaaTGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAGCCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGccgccg < 2:1254289/236‑1 (MQ=255)
tATGGGGGTT‑ATTGCGGACCTTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGCCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAACCCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑Caa < 2:619081/239‑1 (MQ=255)
tGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAg < 2:542650/239‑1 (MQ=255)
ggggT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAACGGGGCGGAA‑G‑AATTA‑AA‑AAGTTTCGCTGGAGATTTTCT‑G‑TTTTGGT‑GCTTTTTTTCC‑GGGGT‑TTTTTTACCCCCTTCCCT‑GGCTTTTT‑CTTTTTTTTCCCCCCGGTG‑Caaaac > 1:718141/1‑237 (MQ=255)
gT‑ATTGCTGGCCATCGTGCTGGTTATATTCACGGCAGTTATCGGTAGGTCAGTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATc < 2:180351/238‑1 (MQ=255)
gT‑ATTGCGGACCCTCGGGCTGGTTATATTCACGTCAGTTATCGGTATGGCAATGGTACGTAACCAGGGTTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAATCCCAGCGGCGGAGAT‑G‑AATAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCGC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATc < 2:637929/238‑1 (MQ=255)
t‑ATTGGTGACCCTCGTGCTGGTTATATTCACGGCAGTTAGCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGGGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCG‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCt < 2:140808/238‑1 (MQ=255)
t‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GGTTGCT‑GCGTTTATTAC‑CGGGC‑TTTTTTTACGACTTCCTC‑GGGCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCctctt > 2:389447/1‑238 (MQ=255)
aTTGCTGAGCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTCACCAGGTCTTTAAGACCTTCGTGCTAATGCATCAACAAATGGCGGCGGATGGAAACCCCGCGGCGGAGGT‑GCATCAAGAA‑GT‑TTTCGC‑‑GAGCGTTCCT‑G‑GAGTTCT‑GGGTTTATTAT‑CGGCG‑CTTTTTACGCACTTCCTC‑CCGCTTCT‑ACTTTTTTATCGGCCGCTG‑Ccaaaaaaatgt > 1:180351/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCCGCGGCGGAGAT‑G‑ATTTA‑AA‑GTGGTTTGCT‑GGTCATTGCT‑G‑GGTTGCT‑GCTTTTATTAC‑CCGGG‑TTTTTTTCCGCCTTCCTC‑GGGCTTCT‑ACTTTTATTTCCGCCGGTG‑CGAAAGCATTTg > 2:803099/1‑238 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑GTTAA‑AA‑AGGTTTTGCT‑GGTCATTGCT‑G‑GTTTGCT‑GCTTTTTTTTC‑CGGGA‑TTTTTTACCGCATTTCTC‑GGGCTTCT‑ACTTTTATTGACGCCTGGG‑CAAAAAAATCTGa > 1:780370/1‑239 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GGTCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTTCCGACTTCCTC‑CGTCTTCT‑ACTTTTTTTTCCGCCGGTG‑CCAAAGCATCTg > 2:580385/1‑238 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTTTTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CCAAAACACCtta > 2:1150623/1‑237 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGCGGCGGAGAT‑G‑ATTTA‑AA‑GGGTTTCGCT‑GGTCATTGCT‑G‑GGTTTCT‑GCTTTTTTTTC‑CGGGC‑TTTTTTTCCGCCTTTCCC‑GGGCTTTT‑ACTTTTTTTTCCCCCGGGT‑Caaaaactgtt > 2:951362/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTAACGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTAGTGCTGATGCAGCAAAAAATGACGGCGGGTGACAAACCCGCGGCGGAAAC‑A‑ATGAA‑AATGAGTTT‑GCC‑GGTCATTTGT‑GTGTTTG‑T‑GTGTTTATTAC‑ATGGC‑TTTTTTTCCGCATCTCTC‑GGTTTTCT‑CCTtttttttcgtccgctgtgaaaaaactgta > 1:1224834/1‑216 (MQ=255)
gACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGa < 2:1003930/239‑1 (MQ=255)
aCCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAACGGCGGGGGTGG‑TTTAA‑AA‑GGTTTACGCG‑GTTCA‑TGAG‑A‑GGTTGCC‑GCCGTTATTACACGGGT‑TTTTTTA‑CGACGTTCGC‑GGGCTTTTAATTTTTATTGCC‑CCGGGG‑CGAAAgaaattaggaaggaa > 1:17013/1‑225 (MQ=255)
gCTGGTTATATTCAGGTCAGTTATCGGTATTGCACTGTTACGGAACCAGGGTTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGc < 1:803099/239‑1 (MQ=255)
atTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTTCT‑GCTTTTATTAC‑CGGGC‑TTTTTTTCCGACTTCCTC‑GGTCTTCT‑CCTTTTATTGCCGCCGGTG‑CCAAAGCATCTGACAGTGAAGTTTATGCCG‑C‑Attttc > 2:31287/1‑237 (MQ=255)
ttaccggtcgttttgggTATGTCACTGGGAGGTAACCAGGGGTTTAAGAATTTCGGGGTGATGCAGTAAAAAAGGGCGGCGGGGGAAAACCCAGCGGGGGGGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTgcg < 1:1202229/224‑1 (MQ=255)
ttCCCGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTgcg < 2:773392/239‑1 (MQ=255)
aCGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GAGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGGCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAACATCTGACCGTGAAGTTGATGCCC‑C‑ATTTGCGCtt > 2:735521/1‑239 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTTCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTTTTGCCGCCGGTG‑CCAAAGCCTCTTACCGTGAAGTTTATTCCG‑C‑CTTTTCGCttt > 2:1202229/1‑239 (MQ=255)
aGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGGCTTCT‑ACTTTTATTGCCCCCGGTG‑CAAAAACATCTGACAGTGAAGTTGATTCCG‑C‑CTTTGCGCtttttt > 2:110211/1‑236 (MQ=255)
tCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGCGGCGGGGGT‑G‑ATTAA‑AA‑GAGTTTTGCT‑GATCATTGCT‑G‑GTTTGCT‑GCCTTTTTTTC‑CCGGC‑TTTTTTTCCCACTTCCCC‑GGTCTTTT‑TCTTTTTTTTCCCCCGGTG‑CCAAAGTATTCTACAAGCGAGTTTGTGCCG‑CAATTTCCGCTTTtctgcct > 1:757203/1‑234 (MQ=255)
ggTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CCGGC‑TTTTTTACCGACTTCCTC‑GGGCTTCT‑ACTTTTTTTTCCGCCGGGG‑CAAAAACATCTGACAGTGAAGGTGATGCCG‑C‑ATTTGCGCCTTTTTCGCATg > 2:198611/1‑237 (MQ=255)
tGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GGGTTTCGCT‑GATCATTGCT‑G‑GGTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑TCTTTTATTGCCGCCGGGG‑CAAAAGCATCTGCCCGTGAAGTTGATGCCC‑C‑ATTTGCGCTTTTTTCGCATGCCcggcggcggg > 2:1233096/1‑238 (MQ=255)
gTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GGGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑gtt > 2:488945/1‑239 (MQ=255)
tccttAACCGGGGTTTTAAAAATTTGGGGTGGAGGCAGCAAAAAATGGCGGCGGGTGAAACCCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑tttt < 1:735521/235‑1 (MQ=255)
tccggatacggggTTTTAAGAATTTCGTGCTTATGCAGAAAAAAATTGGGGAGGGCTAAAACCCAGCCGCGGAGAT‑G‑ATTCA‑AA‑GTGTTTCGCG‑ACACATGGCT‑G‑GTTTGCT‑GTTTTTATTCC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑tttt < 1:971273/229‑1 (MQ=255)
tccGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGGGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑tttt < 2:21334/237‑1 (MQ=255)
gggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGGAT‑G‑ATTAA‑AA‑AGGTTTCGCT‑GGTCATTGCT‑G‑GTTTGCT‑GCTTTTTTTAA‑CCGGC‑TTTTTTTCCCACTTCCCC‑TGGCTTTC‑TCTTTTTTTTCCGCCGGTG‑CAAAAACATCTTACCGTGGAGTTGATTCCC‑C‑ATTTGCGCCTTTTTCGCAGTCCCGGGGGCGG‑GTTTTTGGCCgggg > 1:119859/1‑238 (MQ=255)
gggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTTCTC‑GGTCTTCT‑ACTTTTTTTTCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑GTTTTTCGCCgcg > 2:103198/1‑236 (MQ=255)
gggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAGCGGCGGAGAT‑G‑ATTAA‑AA‑AGGTTTCGCT‑TATCATTGCT‑T‑GTTTTCT‑GCTTTTATTAT‑CCGGG‑TTTTTTCACGGCTTCCTC‑GGTCTTTT‑TATTTTTTTGCCCCCCGTG‑CCAAACAACCTGCCATTGAAGTTGATTCCG‑C‑CTTTGCGCTTTTCTCGCCGCCCTGCGGGCGGCTTTTAG‑GCCgggg > 1:1215218/1‑238 (MQ=255)
gggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑AGGGTTCGCT‑GATCATTGCT‑G‑GGTTGCT‑GCTTTTATTAC‑CCGGC‑TTTTTTACCGGATTCCTC‑GGGCTTCT‑ACTTTTTTTTCCGCCGGGGTCAAAACCCTCT‑ACCGTGGAGGTTGTGCCGCC‑TTTTCCGTTTTTTCCGCATCCTGGGCGGGGG‑TTTATGGGCCggg > 1:314548/1‑239 (MQ=255)
ttAAGAATTTCTGGTTGATGCAGAAAAAAATGGCGGCGGGTGAAACCCCGGGGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGt < 1:103198/239‑1 (MQ=255)
ttAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGt < 2:675855/239‑1 (MQ=255)
ttAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGt < 2:10824/239‑1 (MQ=255)
tAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGGGT‑G‑ATTTA‑AA‑ATGTTTCCCT‑GGTCATTGAT‑T‑GGTTGCT‑GCTTTTTTTTC‑CCGGCTTTTTTTCCCGATTTCC‑C‑GGTCTTTT‑TCTTTTTTTTGCGCCGGGT‑CCAAAACATCTTGCCGTGAAGTTTATGCCC‑C‑CTTTTGGCGTTTTTCGCATGCCCGGCGGGGG‑gtttttggcgggggccgggg > 1:921369/1‑223 (MQ=255)
tAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGc > 2:1187201/1‑185 (MQ=255)
tAAGAATTTCGTGCTGAAGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGc < 1:1187201/185‑1 (MQ=255)
tttcgttgggATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCgg < 2:1224834/228‑1 (MQ=255)
tttCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCCGCGGCGGAGAT‑G‑ATTAA‑AA‑GGGTTTCGCT‑GGTCATTGCT‑G‑GGTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTTACCAATTTCTC‑GCGTTTCT‑TCTTTTTTTGTCGCCGGGG‑GAAAAACAACCGTCAGTGGAGGTGATTTCC‑C‑TATTTCGCTTTTTTCGCATACCCTGCGGCCG‑GTTTATCGGCgggggggccggcgggg > 1:251816/1‑226 (MQ=255)
tttCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑CTTTGCGCTTTTTTCGCATGCCTGGCGGCGG‑GTTTAGCGCCCGGACCGGGGGCgggg > 2:649555/1‑237 (MQ=255)
ttCGTTCTGATGCATCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTaa < 2:459517/239‑1 (MQ=255)
tCGTGCCTATGCAGTAAAAAAGGGGGGCGGGGTAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTTTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAAt < 2:1095771/239‑1 (MQ=255)
ttgccacaAAAATTGGCGGGGGGGGAAACCCCAGGGGGGGGAAT‑G‑ATTAA‑AA‑GGTTTTCGCT‑GATCATTGCG‑G‑GTTTGGT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGa < 1:1116850/233‑1 (MQ=255)
tGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGa < 2:780370/238‑1 (MQ=255)
tcagaaAAAAATGGGGGGGGGTGAAACCCCTGGGGGGGGGGT‑G‑TTTAA‑AA‑TTTTTTCGGT‑TGTCATTGCT‑T‑GTTTGTT‑GTTTTTATTAC‑CGGGC‑TTTTTTACCGGCTTCCTG‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATg < 1:649555/238‑1 (MQ=255)
gcagaaAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAG‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATg < 2:850048/239‑1 (MQ=255)
ggggggtggat‑g‑atTAA‑AT‑TTTTTTCGCT‑TATTCTTGGT‑G‑GTTTGTC‑TTTTTTATTCC‑CGGGG‑TTTTTCACCGTCTTCCTC‑GTTCTTCT‑ACGTTTATGGCCGCCGGTG‑CAAAAGCATCTGACAGGGAAGTTGATGCCG‑C‑ATTTGGGCTTTTCTCGCCTGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:580385/231‑1 (MQ=255)
gcggcgGGAAT‑G‑ATTAA‑AG‑GTTTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 2:189530/239‑1 (MQ=255)
ggcggAGAT‑G‑ATGAA‑AA‑GGGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGcgcg < 2:757203/236‑1 (MQ=255)
gat‑t‑atAAA‑AA‑GTGTTTCGCT‑GAGTATTGGT‑T‑GTTTGCT‑GCTTTTATTCC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCtt < 2:1215218/238‑1 (MQ=255)
tggttttAA‑AT‑GTTTTTTCCT‑TATCATTTCT‑G‑TTTTTCT‑GTTTTTTTTGC‑CGGGC‑TTTTTTACCTGTCTCCTT‑GTTCTTGT‑TCTTTTATTGCCGCCGGTG‑CAAAAGCAGTTGACAGGGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCtt < 1:25389/233‑1 (MQ=255)
gttttttAA‑AT‑TTGTTTTCCT‑GATTATTGGT‑G‑GTTTGCT‑GTTTTTATTTC‑CGGGG‑TTTTTTACCGACTTCCCG‑GGTCTTCT‑GCTTTTATGGCCGCCGGGG‑CAAAAGCATCTGACATTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCGCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCtt < 1:629495/233‑1 (MQ=255)
ggtataatgtaatggttttCGCT‑TGTCATTTGT‑G‑TTTTGCT‑GGTTTGTATAC‑CGTGC‑TTTTTTCCCCATTTCATC‑GTTCTTTT‑ACTGTGCTTTCCGCCGGTG‑CAAATGATGCTGACAGTGAAGTGTATGCCG‑C‑ATTGGCGCTTTTATCGCATTCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATCCTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCt < 1:843689/223‑1 (MQ=255)
atTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTgcg < 2:166967/134‑1 (MQ=255)
atTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTgcg > 1:166967/1‑134 (MQ=255)
taaagttttttCGCT‑CATTTTTTCT‑G‑GTTTGTT‑GCTTTTATTCG‑CGTGC‑TTTTTTCCCGACTTCCGG‑GGTCTTCT‑TCTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGGGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATa < 1:110211/231‑1 (MQ=255)
tttttCGCT‑GTTATTTGTG‑G‑TTTTTCT‑GTTTTTATTCC‑CGGGT‑TTTTTTACCGATTTCCCC‑GGTCTTCT‑ATTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAATTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCGGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACg < 1:876015/237‑1 (MQ=255)
tgtTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTCC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACg < 2:314548/239‑1 (MQ=255)
ttttCGCT‑GATCATTTCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACg < 2:921369/237‑1 (MQ=255)
tttCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGCGGGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGa > 2:1108263/1‑238 (MQ=255)
tttCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑CTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGGGCGCGACCGCCTTGATCATAAAGACgg > 2:25389/1‑237 (MQ=255)
ttCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑GTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGGTGGTGAGTAACAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGAt > 2:1105566/1‑238 (MQ=255)
cGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGc < 2:119859/239‑1 (MQ=255)
gCT‑GATCATTTCT‑G‑GTTTGTT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 2:224234/239‑1 (MQ=255)
gctgttgtttgtt‑g‑GTTTGTT‑GTTTTTTTTCC‑CGGTC‑TTTTTTCCCGACTTCCTG‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 1:1233096/231‑1 (MQ=255)
cT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTa > 2:277857/1‑148 (MQ=255)
cT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTa < 1:277857/148‑1 (MQ=255)
gcttctctttttgtttttGCT‑TCTTTTTTTAC‑CGGCT‑TTTTTTTCCGACTCCCTC‑GGTCTTCT‑TCTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGGTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGCGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 1:1108263/224‑1 (MQ=255)
gttttGTT‑GTTTTTATTCC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTTT‑ATTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCg < 2:477730/237‑1 (MQ=255)
gTTTGCT‑GTTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAAt < 1:1149616/158‑1 (MQ=255)
gTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAAt > 2:1149616/1‑158 (MQ=255)
gTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGCAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGa > 2:4891/1‑239 (MQ=255)
gTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑GTTTAGCGCCGGGGCCGGGGGCGGGAATAATTTTGATGGTGGGTTCCAGCGAAAGGGTGGTGAGCGCGACCGCCTTGTTCCTAAAGACGacacgccggattaaatgtga > 1:213217/1‑220 (MQ=255)
ttGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGCAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGGTTAATGTCGaa > 2:1128329/1‑238 (MQ=255)
ttGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaaa < 2:6403/239‑1 (MQ=255)
gttgtttttgttc‑cGGGG‑TTTTTTTCCCGTTTCCTCGGGTCTTTT‑ACTTTAGTTGCCGCCGGTG‑CAAAAGCATCTGACAGGGAAGTTGATGCGG‑C‑ATTTGCGCTTTTCGCGCAGGCTGGGCGGCGG‑TTTTAGCGCGGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACg < 1:31287/227‑1 (MQ=255)
ttctTTTTTTCC‑CGGGT‑TTTTTTACCCTCTGCCCT‑GGTCTTCT‑TCTTTTATTGCCGCCGGGG‑CAAAAGGAGCTGACAGGGAATTTGAGGCCG‑C‑ATTTGGGCTTTTCTCGCATGCCTGGGGGCGG‑TTTTAGCGCCGGGACCGGGGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGcc < 1:1242092/237‑1 (MQ=255)
ttttACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGGTAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGCGTAAGTGCGAACCCCCGGATTATTGGGTTGTGCCa > 2:739675/1‑239 (MQ=255)
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TATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGT‑ATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGAT‑G‑ATTAA‑AA‑GTGTTTCGCT‑GATCATTGCT‑G‑GTTTGCT‑GCTTTTATTAC‑CGGGC‑TTTTTTACCGACTTCCTC‑GGTCTTCT‑ACTTTTATTGCCGCCGGTG‑CAAAAGCATCTGACAGTGAAGTTGATGCCG‑C‑ATTTGCGCTTTTCTCGCATGCCTGGCGGCGG‑TTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGGTTATGCCA > NC_000913/4368704‑4369172
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
