Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F2 I0 R1
|
88 |
153.3 |
2661736 |
98.2% |
2613824 |
271.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,466,582 |
T→C |
11.4% |
pseudogene (1191/2513 nt) |
ydbA → |
pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,466,582 | 0 | T | C | 11.4%
| 211.5
/ 3.8
| 86 | pseudogene (1191/2513 nt) | ydbA | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base T (40/30); new base C (4/7); total (46/40) |
| Fisher's exact test for biased strand distribution p-value = 3.29e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
TAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCG > NC_000913/1466294‑1466865
|
tAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCCACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAATCCATCGGTATCCAGGTCGACGGCTACCAGACCgtt > 1:991493/1‑289 (MQ=255)
aaGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCAGCGGTATCCAGGTTGACGGCGACCAGGCGGTGGTTaa > 1:1193778/1‑289 (MQ=255)
aGGCGAGAGCACCATCACCAACGGTGGCATCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCA‑GACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTaaca > 1:130583/1‑289 (MQ=255)
agagCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCGATTGTTagcaatca > 1:560384/1‑286 (MQ=255)
cATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGCCATCAATGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACAATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGAGACCAGGCCACTGTCAATCACGAAGGCgag > 2:586989/1‑289 (MQ=11)
aacaacaacaggTGACCCCGGAACCCTGTTTACTGGGGATAACG‑CACCGCCAACAACAACGGGAAAACCACCGTTGAAGGGAAGGATTCCACCGGTACGGAAATTGCTGGGAATAACGGGAAGGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGGACCATGACCGTCACCGATCAGGAGTCCTTCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCgaga < 2:130583/279‑1 (MQ=14)
tCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTACATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCgaga > 1:1326302/1‑288 (MQ=255)
cAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGcc < 1:1070703/289‑1 (MQ=255)
ggTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGcc > 2:678708/1‑285 (MQ=255)
ggTGGAACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGcc < 1:678708/285‑1 (MQ=255)
ggcaccggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCAcc < 1:358891/288‑1 (MQ=255)
accggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGCCCATCGGTATCCAGATTGACGGCCACCAGGCGGTTGTACATAACGAAGGCAAAAGCGCCATCACCCACg > 2:832668/1‑289 (MQ=255)
gcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCCAGTATCTCACCGACACGGAAATCTACGGACAAAACGGCAAGGGTATTTAGGACGGCGCTCTGGATGTCAGCGGCGACGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTGGGCAATAACGAAGGCGGGAGCACCATCACCCAGGGTgg > 2:242171/1‑289 (MQ=11)
gcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATCCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGATCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAAAGAAGGAGAGAGCACTATCACCAATGGCgg > 1:1327617/1‑289 (MQ=11)
tAAGGGTGATGAGGCCACAGCAAACAACAACGGCAAAACCACCGTTGACGGTAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGGTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 2:464180/289‑1 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCa > 2:251085/1‑279 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCa < 1:251085/279‑1 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACG‑CAGAttca > 1:758140/1‑287 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGCCCAGGCCGTCGTCAATAACGAAGGCGAGAGCACCATCACCACAGGCGGCACCGGCACT‑Cataacaa > 2:671060/1‑283 (MQ=11)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGCTATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTACCGGCGACCAGACGGTCGTAAACACAGAAGACGAGGGCCCAACCACAAATGGTCGCACCGGCCCT‑CAGAtca > 2:890805/1‑286 (MQ=11)
gaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACg < 1:955717/289‑1 (MQ=255)
cGCCACAGCAAACAACAACGGCAAAACCGCCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACg < 2:1117450/287‑1 (MQ=255)
cACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCAATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGtgag > 1:252179/1‑288 (MQ=255)
gggcaacaataacCGCAAAACCACCGTTGACGGAAAGGGTTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGtgat < 1:1166662/282‑1 (MQ=255)
ggCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGGCCATCGGTATCCAGGTTGACGGCGACCAGGCGATTGTTAACAACGAAGGCGACAGCCCAATCCACAATGGCGGCACCGGCACG‑CAGAGTAACGGTAATGAc > 2:1319009/1‑289 (MQ=14)
cGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCAc > 1:923231/1‑252 (MQ=255)
cGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCAc < 2:923231/252‑1 (MQ=255)
aaaCCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGTCACCATGACCGTCACCGCTCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACCCCACGGCaacaaaaa > 1:497566/1‑282 (MQ=255)
accaccGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAATGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCGTTGTTAACAACGAAGGCGAGAGCGCTATCACCAACGGCGGCACCGGCACG‑CAGATGAACGGTGATGACGCCACGGCAAACAACAACg > 1:981210/1‑289 (MQ=255)
ttCCACCGGTAGTGAAATCAACGGGAATAACGGAAAAGTGAGTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGTTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACAGGCACC‑CAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGc < 2:1311414/289‑1 (MQ=11)
gtCCACAGGTACGAAAATCAACGGTAATAACGGAAAAGTGTGTCAGGGCGGCGATCAGGATGTCAGCGGCGGGGGTCACCGTATTGGTATCACGGGCAACAGCGCAACCATAGATAGCAGGGGCACCATGACCGTAACCGTTTCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGATCGTTAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGc < 2:575980/288‑1 (MQ=14)
ccACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGCTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAACCCACCGTTGACGGCaa > 1:651676/1‑289 (MQ=255)
cgacGGTACGGAAATGAACGGTAATGACGGAAAAGTGATTCAGGAGGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGATTGATATCACCGGGGACAGCGCAACGGGGGATAACAAGGGCACCAGGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGTGAACGGGCGGTCGTTAACAACGAAGGCGAGAGGGCCATCACCAACGGTGGCACCGGGACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAg < 2:1168462/286‑1 (MQ=14)
gTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAgcg > 1:454381/1‑198 (MQ=255)
gTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAgcg < 2:454381/198‑1 (MQ=255)
gTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGAtt > 1:1047912/1‑288 (MQ=255)
aCGGTAAAAACGAAAAAGTTATTCAGGACGGCGGTCTGGATGTCAGCGGCGGCGGTAACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGa < 2:1047912/289‑1 (MQ=255)
caataaCGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACgg < 2:254175/283‑1 (MQ=255)
caataaCGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACgg > 1:254175/2‑284 (MQ=255)
aataaCGGAAAAGATATTCAGGACGGCGCTCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCGCCGGTGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGAGCCGGAGTCCATGGGTATCCAGATTGAAGGCGACCAGTCGTTAGTGAAAAACGAAGGCGAGAGAACCATACAAAACGGTGGCACCGGCACGCCAGA‑TGTGGGTAAGAACGCGACAGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTg < 2:588135/289‑1 (MQ=11)
taGTTATTCAGGTCGGCGTACTGGCTGGCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATaa < 1:665140/288‑1 (MQ=255)
aaGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCAACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACAGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATa < 1:256181/288‑1 (MQ=255)
cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAATAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACG‑CAGATTAACGGTAATGACGCCACGGCGAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACGGGTACCGAAATTGCTGGCAATAACGGGAAGGtaaa > 2:1220857/1‑285 (MQ=255)
cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGcc > 1:111309/1‑205 (MQ=255)
cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGcc < 2:111309/205‑1 (MQ=255)
cGGCGATCTGGATGCCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCGTTGTAAATAACGAAGGCGAGAGCGCTATCACCAATGGAGGCACCGGCACG‑CAGATAAACGGTAATGACGCCACAGCGAACAACAGCGGCAAAACCACCGTTGATGGCAACGATTCCACGGGTACGAAACTCGCTGGCAATAACGGCAAGGtaaat > 2:1135113/1‑285 (MQ=11)
cACGGTATTGATATCACCGGGGACAGCGGAAAGGTGGATAAAAAGGGATCTATGACGTTCACCGAGCCGCAGTCCATCGGTATCCAGGTTCACGGCGACCAGGCGGTGGTTATCAACGAAGGGGAGATCGCCATCACCAACGGTGGCACCGGAACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACTGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcg < 2:1326302/289‑1 (MQ=17)
gtcgaaacaaCCGGCGAAGGCGCAACGATAGAGAAAAAGGCCACCATCACCGCAGCCGATCTGGAGTACACGGATAGCCAGGTTGACGGTGAACGGGCGGTCGTCAAAAACGAAGGCGAGAGCCCCATCACCAACGGTGGCACCGGCACG‑CAGCGTAACGGTGATGACGCCACGGCAAACAACAACGGCAAATCCACCGTGTACGGCGAGGACTACACAGGTACACAAATGGCGTGTCATCGCGAGAGTGTGATTCATATAGGAGATAGGGATGTCAGCGGCGGCGGTc < 2:307275/280‑1 (MQ=255)
aTTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGt < 1:93091/288‑1 (MQ=255)
ttGATATCACCGGCGAAAGCGAAACGGTGGATAACAAGGGCGCCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa < 1:598666/289‑1 (MQ=255)
ttGATAGCACCGGCGACATCGCAACGGTGGATATCAATGGCACCAGGACCGTAACCGATCCTGAGTCCATCGGTATCCAGGGTGACGGCGACCAGGCGGTTGTAAAAAACGAAGGCACGGGCGCCATCACGCACGGTGGCACCGACACG‑CAGATTATCGGCGAGGAGGCTCGTGCGAACAGCAAGGGGAATACCACCGACGGCGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGAAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa < 2:651676/289‑1 (MQ=17)
tCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAATGGTGGCACCGGCACG‑CAGATCAACGGTAATGACGCCACGGCAAACAACAACGGCAAAACTACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCAATCTGGATGTCAGAGGCGGCGCGCACGGTAt > 1:761535/1‑289 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCGCCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg > 1:41621/1‑254 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCGCCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg < 2:41621/254‑1 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCTATCTGGATGTCAGCGGCGGCGGTCACGGTATTg > 1:519353/1‑289 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCAAGGTATTg > 1:1106527/1‑289 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATAGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCTCTCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACCACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCTCCGGATGTCAGCGGCGGCGGGCACGGTATTg > 2:93091/1‑289 (MQ=255)
cGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCAGTTGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATCAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGATGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGATGGTGATTCAGGACCACGGTCTGGATGTTAGCGGCGGCGGGCACGCTGTTGag > 1:292419/1‑288 (MQ=17)
ggtgACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGAACCGGAGTCCATTGGTATCCAGGTTGACGGTGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGata < 1:463972/286‑1 (MQ=255)
cGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGCTTGACGGCGACCAGGCGGTTGTCAACAACGAAGGCGAGAGCACCATCACCAATGGCGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACCGGTACGGCAATTGCAGGACATATCGGTAATGTCCATCACGCAGGCAACCTGATTGTCCAGGGCGGCGGTCACGTTAttcaatcg > 2:777664/1‑283 (MQ=14)
atgaccagggacccATGACCGTCACCGATCCGGAGTCCATCGGTATCAAGGTGGACGGCGAACAGGCGATCGTTAACAACGAAGGCGAGAGCCCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTATTGACGCCACGGCAAACAACAACGGCAAAACCACCGTGTACGGCAAGGATGCCACCGGTACGGACATGACTGGCAAGAACGGTAACGTGGGCAACGACAGCGGTCTAGAAGTGACAGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCaa < 2:911405/276‑1 (MQ=14)
aTAACCAGGACACCATAACCGTCACCGATCCGGGGTCCATGGGTAGCCAGATTGACGGGGACCAGGCGTTTGTTAACAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCAAC‑CAGATTAACGGTGAGGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGTAATAACGGGAAGGTGATTCAGGACGGCGATCTGGTTGTCGGCGGCGGCGGTCGCGGTATTGATATCACCGGCGACAGCGCaa < 2:380603/288‑1 (MQ=14)
cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTAGCAAGGTTGACGGCGACCAGGCGGTCGTGAACAACGAAGCCGAGAGCGCCATCACCAACGGTTGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATGGATATCACCGGCGACAGCGCAACGGTg < 1:616891/289‑1 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGATAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGAAATAACGGGAAGGTTATTCAGGACGGAGATCTGGATGTCAGCGACGGCGGACACGGTATTGATAGCACAGGTGACAGCGCAACGGTggct > 1:786997/1‑287 (MQ=17)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGt < 1:143806/256‑1 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAAc > 2:259914/1‑282 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAAc < 1:259914/282‑1 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGt > 2:143806/1‑256 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGAATGATATCACCGGCGACAGCGCAACGGTggct > 1:429381/1‑287 (MQ=255)
ggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGt < 1:1200832/249‑1 (MQ=255)
gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGTTTGACGGCGACCAGGCCATCGTTAACAACGAAGGCGAGAGCGCTATCAGTCTCGCATACACCGCTAAC‑CCTACTGACGGTGATGACGCCACGGAAAACAACTTCGGCAATACCACCGTAGACGGCAAGGATTCCACCGGCACGGAAATTGCTGGCAATAACGGGAAGTTGCTACAGGACGCCGAACTGAATGTGATAGGCGTCGGCCCCGGAATTGGTATCCCAGGCgctagcacgatgtggtatg > 2:957898/1‑270 (MQ=9)
gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg > 1:782436/1‑244 (MQ=255)
gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg < 2:782436/244‑1 (MQ=255)
cgataCCGACCCCGATCGGATGTCGATCGGTATCCAGTTGTAAGGGGACCAGGCAGTTGGTAACACCGAAGTGGAGAGCACCATAACCAACGGTGGCACCGTGACG‑CATATGAGAGTTGATGACGCCACGGCAAACAACAACGACAAAACCACCGTTGACGGCAAGGATGCCACTGTTACGGAAATTGCTGGCAATAAGGGGAAGATGAGTCAGGACGGCGACATGGATGTCAGCGTCGGAGGGCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAg < 2:1224415/285‑1 (MQ=9)
aTGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGCTGTCAGCGGCGGTGGTCACGGTATTGATATCATCGGCGACAGCGCAACGGTGGACAACAAgg > 1:539512/1‑289 (MQ=255)
tGACCGTCACCGATCCGGAGTCCATGTGTATCCAGCTTGACGGCGACCAGGCGGTCGTTAACAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGATGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAggg < 1:1048865/289‑1 (MQ=255)
aTCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGAAAACAAGGGCACCATGACCg > 1:1003224/1‑288 (MQ=255)
aGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAgg < 2:922362/186‑1 (MQ=255)
aGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAgg > 1:922362/1‑186 (MQ=255)
tCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACCGCAAACAACAACGGAAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGCAAATTGCTGGCAATAACGGCATGGTGATTCATGACGGCAAACTGCATGTCCGCGGCGGCGGTCACGGTGTTGATATCACCGGCGACCGCCCAACGGTTGAAACGAAGGGCACCATGCCCGTACCCGAt > 2:1182691/1‑288 (MQ=17)
tATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa < 1:775780/216‑1 (MQ=255)
acgaggtggaacggaaCCAGGCGGTGGTCAAAAACAAAGGCGAGGGCGCCCTCAACAAGGGTGGCACCGTCCCC‑CAGATTAAAGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACTGAAATTGCGGGTAATAACGGGAAGGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATGGATATCACCGGCGACAGCGCAACGATGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCAt < 2:988163/274‑1 (MQ=11)
gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACGGGTACGAAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGAGCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGAGCAACGGTGGATAACAAGGGCACCATGACTGTACCCGATCCGGAGTCAATCGGTGTca > 2:717879/1‑288 (MQ=255)
cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc > 1:321159/1‑182 (MQ=255)
cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc < 2:321159/182‑1 (MQ=255)
cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCATCATGACCGTCCACGATCCGGAGTCCATCGGTATCCAg > 1:665178/1‑289 (MQ=255)
gCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCCGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGCCCATCGGTAGCCAGATTGACGTCg > 1:929176/1‑289 (MQ=255)
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TAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG‑CAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCG > NC_000913/1466294‑1466865
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
