Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F38 I0 R1
|
84 |
159.8 |
2857830 |
97.8% |
2794957 |
259.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,466,582 |
T→C |
10.7% |
pseudogene (1191/2513 nt) |
ydbA → |
pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,466,582 | 0 | T | C | 10.7%
| 250.3
/ 7.4
| 95 | pseudogene (1191/2513 nt) | ydbA | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base T (51/31); new base C (9/3); total (60/35) |
| Fisher's exact test for biased strand distribution p-value = 5.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACC > NC_000913/1466300‑1466868
|
agacGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTaa < 2:1233607/285‑1 (MQ=255)
gagaGCACCATCACCAACGGTGGCACCGGCACCCAGAGTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACg < 2:652050/289‑1 (MQ=255)
cATCACCAACGGTGGCACCGGCACCCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGAAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCACGACAGTACCCGATCCGGAGGCCATCGGTATCAAGGTTGTAGGAGAGCGAGCGGGTGTTAACAACGAAGGCgcg > 1:184586/1‑287 (MQ=14)
cATCACCAACGGTGGCACCGGCACCCAGAATAAGGGTGAGAACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCgag < 2:690420/289‑1 (MQ=255)
aTCACCAACGGTGGCACCGGCACCCAGATCAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATACACGGCAAAAGCGGAAGAGTAAACCACGACGGTGAATTGGATGTCAGCGGCGGCGGTCACGGTATAGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGCACGTCACCGATCCGGAGTCCATCGGTATCAAGGTTTACGGCCACCAGGCGGTCGTTAACAACGAAGGCgaga > 1:1249283/1‑289 (MQ=11)
ccAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAgcg > 2:1080752/1‑288 (MQ=255)
cGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGAAAATCACTGGCAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTAAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACAATGACCGTCACCGATCCGGGGTCCATAGGCATCCAGATTGACGGCGACCGGGCCATTGTGACCAACGAAGGCgggcacaccatc > 1:367499/1‑278 (MQ=11)
tGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCGTTGTCAATAACGAAGGCGAGAGCACCATCAcc > 2:949049/1‑289 (MQ=255)
ggcaccggcaccCAGATTAATGGTGATGAAGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCAcc < 2:347734/288‑1 (MQ=255)
accggcaccCAGTTTAATGGGAAGGAAGCAGCGGCAAACAACAACGGCAAAACCACCGTGGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGAGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAAc < 1:921785/288‑1 (MQ=255)
caccCGGATTAATGGTTATGACGCAACGGCAAAAAACAACGGCAAAACCAACGTTGACGGAAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTAAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTgg < 2:1317264/288‑1 (MQ=11)
caccCCGATTAAGGGTGATGAAGCAAAGGCAAAAACCAAAGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGAAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGAAAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTgg < 1:1080752/288‑1 (MQ=17)
tAATGGTGATGACGCCACAGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 2:1316381/289‑1 (MQ=255)
tAAGGGTGATAAAGCCACGGCAAACAAAAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCGGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 1:1363301/289‑1 (MQ=255)
gaaTGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 2:184586/288‑1 (MQ=255)
aacggggataatgCCACAGTAAACAACAATGGCAAAACCACCGTGGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTGATTCAGGACGGCGATCTGGATGTCAGGGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 1:429290/276‑1 (MQ=14)
gatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTAGTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑tt < 2:499799/288‑1 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCa < 1:1170755/279‑1 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCa > 2:1170755/1‑279 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTa > 2:1186317/1‑288 (MQ=255)
atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTAAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGAGAACAAGGGCACCATGACCGTCACCGATCCGGAGCCCACCGGTATCCAGATTGAAGGCGACCAGGCGGTCGTTAACCACGAAGGCGTAAGCAGCAGCACCAAAGGGGGCACCGGCACGCAgcgca > 1:1349280/1‑284 (MQ=14)
aCGCTACGACAAACAACAAGGTCGAAACCGACGTTGACGGTAAGGATTCCACCGGGAAGGAAATCAACGGTAATAACAGAAAAGTTATTCATGACGGCTATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCTCCGGCGACAGCGCAACGGTGGATAACAAGGTCTACATGACCGTCACCGTTCCGGAGTCCATAGGTATCCAGGTTGACGGTGACCAGGCGGTTGTTAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACg < 1:1121836/288‑1 (MQ=14)
cGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGTACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAaac > 2:507900/1‑289 (MQ=255)
aaagATTCAACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGtt < 2:460536/285‑1 (MQ=255)
gTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCGGTCGTTAACAACGAAGGCGAGAGCGCTATCACCAACGGTCGCACCGACACGCAGA‑TTCACGGCGATCACG‑‑‑‑CCAC‑GGCACACAACACCGGACACACCAACGATAACAGCAAgactc > 2:333261/1‑284 (MQ=14)
tACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCCGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTcc > 2:711735/1‑289 (MQ=255)
tACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCCAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTcc > 2:1183061/1‑289 (MQ=255)
cGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATACCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCACACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCa > 2:1378639/1‑288 (MQ=255)
aaCGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCAACCGGTAC‑gg > 2:430302/1‑289 (MQ=255)
aaaGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCCCGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAAGGGCAAAACCAATGTTGCAGGAAAAGATTCCAACGGTAC‑CAAAATCGCAGACAATa > 1:1068836/1‑289 (MQ=14)
taacgtggtgtacgcggcggcgGTCACGGTATTGATATCACCGGCGACAGGGCAACGGTGGATAAAAAGGGCACCATGACCGTCACCGATCCGGATTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTGGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CAAC‑GGCAAAGAACAAAGGCAAAACCGCCTTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAgg < 1:1183061/276‑1 (MQ=17)
aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGCTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGCCCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TCACCGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGACAAACCACCGTTGATGGCACGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGCAAGGTGATTCCGGTCGTCGGTCTgg > 2:519160/1‑289 (MQ=17)
aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTgg > 2:1265965/1‑289 (MQ=255)
aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACCGGTAC‑CGAAATCGCGGGCAATAACGGGAAGGTGATTCAGGTCGGAGATCTgg > 2:183569/1‑289 (MQ=255)
gcggcggTCACGGTATTGATATCACCGCCCACAGCGCAACGGTGGCTAACCAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAACTTGCTGGCAATAACGGGAAGGTGCTTCAGGACGGCGATCGGGATg > 1:268511/1‑288 (MQ=255)
gcggcggGCACGGTATTGATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCAATGGGTAACCAGATCGACGGTGACCGGGCCGTCGTCAATACCGAAGGCGAGAGCAGCATCACACACGCTGGCACCGCGACTCAGA‑TGAATGGTGAGGACG‑‑‑‑CAAC‑AAAGAAAAACAAGGGCAAAACGACTGTTGACGGAAACG‑TAGCCCCGGGACACAAAATCGGGGGCAATATCGGGAAGGTGATTCatgtcgaccgcacgaccgt > 1:895339/1‑271 (MQ=2)
gcggTCACGGTATTGATATCACCGGCCACAGGGCAACGGTGGATAACAAGGGCACCATGACCGTCCCCGATCCGGAGTCCATCGGTAGCCAGGTTGACGGCGACGAGGCGGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGAAACCAGA‑TTGACGGTAACGACG‑‑‑‑CCAC‑GGCGAACAACAGCGGCAAAACCACCGCTGACGGCAAGGATTCCACCGGGAC‑AGAAATTGCTGGCACTAACGGCAAGGTAAATCATGATGGccgcctgactgtta > 1:1207201/1‑275 (MQ=14)
cACGGTATTGATATCACCGTCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGAGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcg < 2:406927/289‑1 (MQ=255)
aCGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg < 2:268511/289‑1 (MQ=255)
tCACCGGCGACAGCGCAACGGTGGATAACAAGCGCACCCTGACCCTCACCGATCCGGACTCCCGCGGCATCCAGGTTGACGGCCACCAGGCGGCTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAACTTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCCCGGGATGTCAGAGGCGGCGGTCACGGTAt > 1:45240/1‑289 (MQ=18)
aCCGGTGACAGCGCAACGGTGGATAACAAGGCCCCTATAAACATCTCACATCCGGAACCCATCGGTATGCATATCGATGGGTACTCGCCGGTCGATAATAACGAAGGCGAGTGCACCATCACCAACGGTGGCACCGGCACGCAGA‑TTAATGGTGATGACG‑‑‑‑CCAC‑CGCAAACAACAACGGCAAAACCACCTTTCACGGCAAGGATTCCACCGGTAC‑GGAACTCAACGGTAATAACGGAAACGTTATTCAGGACGGCGCTCTGGATGTCAGCGGAGGCGGTCaagtgatt > 1:228677/1‑281 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGGCACGGTATTg > 2:1397735/1‑289 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAAAGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTa > 2:604852/1‑214 (MQ=255)
aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATTGTCAACAACGAAGGCGAGAGCACTATCACCACC‑‑‑GGCTCTTATACACAG‑‑CTGACGCTGCGGACGATACCCAC‑GGCATAGATCTCCGTCAACACCACAGTAGACAGAAAAGATTCAACAGGTAC‑GGAAATCGTTGGCCAGAAAGGGACGGGGATTCAGTACGGCGCTCTGGATACCAGCGGCGCCGGACACGGCATTg > 1:825045/1‑289 (MQ=2)
cGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc < 2:1112558/254‑1 (MQ=11)
cGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc > 1:1112558/1‑254 (MQ=11)
cGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTGGACGGCGACCAGGCGGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCAc < 1:56799/193‑1 (MQ=255)
tggatacaaaggtgcccgtGACCGTACCCGTTTCGGAGTCCATCGGTATGCGGGTTGACGGCGACCTGGCTGTTTTTAACAACGAAGGCGCACACGCCACTACACACGGTGGAACGTCGACGCAGA‑TTAATGGGTAT‑AAG‑‑‑‑AGACAGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgcg < 1:507900/270‑1 (MQ=12)
gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTAATTCAGGACGGCAATCTGGATGTCAGAGGCGGCGGGCACGGTATTGATATCACCGGCGACAGCGCa > 2:1014638/1‑288 (MQ=255)
aTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCaa < 2:228677/288‑1 (MQ=255)
aaCAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACgg < 2:45240/289‑1 (MQ=255)
cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACCGGTAC‑GGAAATTGATGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCCGCGGCGGCGGTAACGGTCTTGATATCACCGGAGCCAGGGCAACGGTg > 1:828662/1‑289 (MQ=255)
aaaGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTTGCGCCGGCACTCAGA‑TTAACGGTCAAGACG‑‑‑‑CCCA‑GGCATACACCAACGCCAAAACCACCGTTAACCTCAAGGATTCCAACGGGAC‑GGACATTGCTGGCCATAACGGGAAGGTAATTCAGTCCGGCGCACGGGATGTAAACGGCGGCGGTAAAGGTATGTATACCAcgcacacacacgcaacggtg > 1:1186337/2‑270 (MQ=17)
aGGGCACCATGACCGTCACCGATCCGGAGTCCATAGGTATCCAGGTTGACGGCCACCAGACGGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACTCAGA‑TCAACGGTAATGACG‑‑‑‑CCAC‑GACAAACAACACAGGCAAAACCACTGTTGACGGCACAGATTCAACAGGTAC‑GGAAATAGCGGGCAATAACGGGAAAGTAAATCAGGACGGCAACCTGACTGTTAGCAGCGGAGATCACGGTGTTGGTATCCACGGCAACAACGGAACGGTGGa > 1:1068845/1‑289 (MQ=14)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAAc > 1:943303/1‑205 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAAc < 2:943303/205‑1 (MQ=255)
gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTCAACAACGAAGGCGAGAGCGCTATCACCAACGGCGGCACCGGCACGCAGA‑TCAACGGTGACGACG‑‑‑‑CCAC‑CGCAAACAACAACGGAAAAACCACTGTTGACGGCAAAGATTCCACGGGTAC‑CAAAATCGCGGGCAATAACGGCATGGTAAATCTGGACGGTAGCCTGATTGTTACAGGCGGCGGCCACGGTTGTGATTTCaacagacatgacgctacggtggat > 1:801349/1‑266 (MQ=11)
gCAACATCACCGTCACCGATCCTGAGTCCTTCGGCATACAGGTGGACGGCGACGAGGCTGTTATTAACAACGAAGGCGAGAGCGCATTAACCAACGGTGGCACCGGAACGAGGA‑TTAACGGAGATTAAG‑‑‑‑CCAC‑GGCAAAAAACCACGGCAAAACCATCGTTGACAGCAAGAGTTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGAt < 1:1378639/287‑1 (MQ=17)
cACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAAc > 2:1153288/1‑279 (MQ=255)
cACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAAc < 1:1153288/279‑1 (MQ=255)
cACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATaa < 2:522748/288‑1 (MQ=255)
aCCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACa < 2:828662/289‑1 (MQ=255)
ccATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTCTTGATATCACCGGCGACAGCGCAAAGGTGGATAACaa > 2:1202527/1‑289 (MQ=255)
ccATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAcc > 1:1107555/1‑263 (MQ=255)
ccATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAcc < 2:1107555/263‑1 (MQ=255)
cGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGata < 1:434737/251‑1 (MQ=255)
cGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGata > 2:434737/1‑251 (MQ=255)
aTCCGGAGTCCATCGGTATCCGGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcggc > 2:610465/1‑227 (MQ=255)
aTCCGGAGTCCATCGGTATCCGGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcggc < 1:610465/227‑1 (MQ=255)
aTCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TCAACGGTGATGACG‑‑‑‑CCAC‑CGCAAACAACAACGGAAAACCCACCGTTGACGGCAAAGATTCCACCGGTAC‑CAAAATTGCAGGCAATATCGGCAATGTGATTCAGGCCGGCGGCCTGCCTGTCACCGGCGGCGCACACGGTATTGAGACTATCGGCGACACCGTAACGGttaacaagcatgcgacgattgtc > 1:100016/1‑265 (MQ=255)
aTCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCGTTGTCAATAACGAAGGCGAGAGCGTCTCCCTTATCCGCATCTGCGGCA‑GCCGACGAAACGGCGAGTGCG‑‑‑‑CCAC‑CGGAAACAACAACGGCCAAACCAACGTTGACGGCAAGGAATCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAGCGGCGACAGCGCAACGGTGGAAAACAAAGGCCCCATGACCg > 1:424247/1‑288 (MQ=14)
tCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGAt > 2:995010/1‑288 (MQ=255)
ccATCGGTAGCCAGGTGGACGGCGACCAGGCGGTTGGTAACAACGAAGGCGAGAGCGCAATCACCAACGGTGGCACCGGCACGAAGA‑GTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAAAAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGGGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGAGAACAAGGGCACCATGACCGTCACCGATc < 1:1414055/288‑1 (MQ=255)
cATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg > 1:1374807/1‑216 (MQ=255)
cATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg < 2:1374807/216‑1 (MQ=255)
cATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GAAAATTGCGGGCAATAACGGGAAGTGGCTTCAGGACGGCGATCTGGATGTCAGCGGCGGCGCTCGGGTTATTGACATCACCGGCGACAGCGCAACGGTGGAAAACAAGGGCACCAAGACCGTaaccgaaccg > 1:392151/1‑289 (MQ=17)
aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTAACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTAATTCAGGACGGCGATCTGGATGTCAGCGGCGGTGGTCACGGTATTGATATCACCGGTGACAGCGAAACGGTGGATAACACGGGCAACATGCCCGTACCCGATCCgg > 2:937859/1‑289 (MQ=17)
aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGACGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTAATTCAGGACGGCGGTCTGGCTGTCAGCGGCGGCGGTCACGGTGTTGATAACACTGGCGACAGCGCAACGGTGGAACACAAGGGCACCATgcacctcgccgactcgg > 1:596454/1‑273 (MQ=17)
tCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGCTGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGAAACGGTGGATAACAAGGGCACCATCACCGTCACCGACCCggg > 2:373398/1‑288 (MQ=255)
tCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGa > 2:1414055/1‑289 (MQ=255)
tCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGtt > 2:545520/1‑125 (MQ=255)
tCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGtt < 1:545520/125‑1 (MQ=255)
tCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGTTCACGGTATTGATATCACCGGCGACCGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCa > 2:213785/1‑288 (MQ=255)
tCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCa > 2:718472/1‑288 (MQ=255)
gTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACTGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTa > 2:1146870/1‑289 (MQ=255)
gTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTa > 2:1412385/1‑289 (MQ=255)
gACGGCGACCAGGCGGTTGTTAACGACGAAGGCGAGAGCGCCATCGCCAACGGTGGCCGCGGCACGCAGA‑GTAACGGTGATGACG‑‑‑‑CCAC‑GTCAAACAACAACGGCAAAACCACCGTTAACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGAATAAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAACGGCACCAGCGCAACGGTTGATAACAAGGCACCCCTGACCGGGACCGATCCGGAGTCCATCGGTAccc > 1:582226/1‑289 (MQ=17)
gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTCTTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTAACCGATCCGGAGGCCATCGGTATcc > 2:794978/1‑289 (MQ=255)
gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATcc > 2:1066374/1‑289 (MQ=255)
gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGACCTGGATGTCAGCGGCGGCGGACACGGCATTGATAACACCGGCCACAGCGCAACGGTGGATCACAAGGGCACCATGACCATAACAGACCCGGAGTCCCTCTGTGTcc > 1:617752/1‑289 (MQ=17)
gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTAATGACG‑‑‑‑CCAC‑CGCAAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACCGGTAC‑CGAAATTGCTCGCAATCACGGGAGGGGGACGCCGGACGGCGCTCTGGATGGCAGCGGCGGCGGGCACGGTACTGAAATCACCGACGACAGCGCACACGTGGCTAACAAGGGCACACTGAACGTCACAGACCAGGAGTCCATCGGTATct > 1:1042922/1‑288 (MQ=17)
cGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGAtt > 2:917620/1‑289 (MQ=255)
gACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGGTAACAAGGGCACCATGACCGTCACCGACACGGAGTCCATCGGTATCCaaagtg > 1:214288/1‑284 (MQ=255)
cAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACg < 2:214288/289‑1 (MQ=255)
ggCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGc > 2:880714/1‑289 (MQ=255)
ttgttAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TCAACGGTGATGACG‑‑‑‑CCAC‑CGCAAACAACAACGGCAAAACCACCGTTGATGGCAAGGATTCCACCGGTAC‑GGAAATTGCGGGCAATAACGGGAAGGTAATTCAGGATGGTAATCTGGATGTCAGCGGCGGCGGTCACGGTATTCATACTACCGCCGCCAGCGATACGGTGGCTTAACATGGCACCATGACCGTCACCGATCCGGAGCCCATCCGGATCCAAGTTAACAGCGAcc > 1:113574/1‑288 (MQ=14)
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AGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGA‑TTAACGGTGATGACG‑‑‑‑CCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC‑GGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACC > NC_000913/1466300‑1466868
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
