Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F2 I0 R1 88 153.3 2661736 98.2% 2613824 271.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,466,856 A→G 5.2% pseudogene (1465/2513 nt) ydbA → pseudogene, autotransporter homolog, interrupted by IS2 and IS30

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,466,8560AG 5.2% 516.9 / 4.7 169pseudogene (1465/2513 nt)ydbApseudogene, autotransporter homolog, interrupted by IS2 and IS30
Reads supporting (aligned to +/- strand):  ref base A (83/73);  new base G (5/6);  total (90/79)
Fisher's exact test for biased strand distribution p-value = 7.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 169 total aligned reads displayed.

GCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTGGATCGATTG  >  NC_000913/1466577‑1467141
                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                              
gCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCCGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGCCCATCGGTAGCCAGATTGACGTCg                                                                                                                                                                                                                                                                                       >  1:929176/1‑289 (MQ=255)
            aacGAAGGCGAGGGCGCCATCACCAACGGTGGAACCGGCACGCAGATGAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGAAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGAcc                                                                                                                                                                                                                                                                                    <  2:560384/280‑1 (MQ=255)
              cGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCTCTGGATGTCAGCGGCGGAGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTTGATAACAAGGGCACTATTACCGTCACCGATCCGGAGCTCATCGGTACCCAGATTGCTGCCGACCAGGCCCTCGtt                                                                                                                                                                                                                                                                         >  2:870344/1‑288 (MQ=14)
              cGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTAACCGATACGGAGTCCATCGGTATCCAGATTGACGACTACCAGACCAACGTc                                                                                                                                                                                                                                                                         >  1:101300/1‑289 (MQ=255)
                         gcgcCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGCGACCATCGGTGTCCAGATTGACGGCGACCAGGCCATCGTCAATAACGCAgg                                                                                                                                                                                                                                                              >  2:1310898/1‑289 (MQ=255)
                          cgcCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTACATCGGTATCCAGCTTTACGGCGACCAGGCCATCGTCAATAACGAAgga                                                                                                                                                                                                                                                             >  1:182554/1‑288 (MQ=255)
                           gcCATCAACAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGATTGATATCACCGGCGACATCGCAACGATGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGc                                                                                                                                                                                                                                                             <  1:957898/288‑1 (MQ=255)
                                           gCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCaa                                                                                                                                                                                                                                            >  1:496758/1‑289 (MQ=255)
                                           gCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACAGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATGGACGGCGACCAGGCCAACCTAAATAACGAAGGCGGGAGCACAATcaacaa                                                                                                                                                                                                                                            >  2:1214243/1‑289 (MQ=255)
                                             aCCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGAGACCAGGCCATCGGCAATCACGAAGGCAAAAGAACTAACACCaacg                                                                                                                                                                                                                                          >  2:471779/1‑287 (MQ=255)
                                               cGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATAGTCAATAACGAAGGCGAGAGCACTATCACCAATggc                                                                                                                                                                                                                                        >  1:803480/1‑289 (MQ=255)
                                                 gCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACAGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGACGGTGATTCAGGACGGCGATCTGGATGTAAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGTGACCTGCACATAGTCACTAACGAAACTGAGAGCAATaaacacaacggctg                                                                                                                                                                                                                                      >  2:65470/1‑276 (MQ=14)
                                                           tAAGGGGGAGGACGCCACGGAAAACAACAAAGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGATGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACt                                                                                                                                                                                                                            <  2:758140/289‑1 (MQ=255)
                                                                 tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCga                                                                                                                                                                                                                                                           >  2:1280819/1‑252 (MQ=255)
                                                                 tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCga                                                                                                                                                                                                                                                           <  1:1280819/252‑1 (MQ=255)
                                                                 tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGAt                                                                                                                                                                                                                       >  1:654414/1‑288 (MQ=255)
                                                                   atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGCTTGACGGAGACCAGGCCATCGTCAATCACGAAGGCGACAGCACTACCCCCAATGGCCGCACCTGCACTCatcaca                                                                                                                                                                                                                     >  2:145163/1‑283 (MQ=17)
                                                                   atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGACGCGGCACTCAGATCa                                                                                                                                                                                                                     >  1:786403/1‑288 (MQ=255)
                                                                   atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCa                                                                                                                                                                                                                     >  1:119944/1‑288 (MQ=255)
                                                                        gCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTa                                                                                                                                                                                                               >  2:1254546/1‑289 (MQ=255)
                                                                                              aaaCCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCAAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTAACACCAATGGCGGCACCGGCACCAAGAGCAACGGTAACGAC‑CCACCAGCGACTAACaa                                                                                                                                                                                        >  2:21611/1‑288 (MQ=17)
                                                                                               aaCCACCGTTGACGGGAAGGATTCAGCCGGTACGCAAATTCCCGGCAAGAACGGGAAGGTGATTCAGGCCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATGGTGTTCACCGGCGAGAGCGCAACGGTGGATAACAACGGCACCATGACCGTCACCGACACGGAGGCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGt                                                                                                                                                                                       <  2:929176/289‑1 (MQ=17)
                                                                                                  caccGTTAACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATAGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGa                                                                                                                                                                                    <  1:586989/289‑1 (MQ=255)
                                                                                                    ccGTTGATGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGAAGCCACC‑GCGAATAACAGTGGaaa                                                                                                                                                                                  >  1:28163/1‑289 (MQ=14)
                                                                                                     cGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGTTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCAt                                                                                                                                                                                                                                                                             >  1:59539/1‑198 (MQ=255)
                                                                                                     cGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGTTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCAt                                                                                                                                                                                                                                                                             <  2:59539/198‑1 (MQ=255)
                                                                                                         gACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCa                                                                                                                                                                             <  1:242171/289‑1 (MQ=255)
                                                                                                                    ttCCACCGGTAATGAAATCAACGGTAATAACGGTAAAGTGATTCAGGACGGCGATCTGTAAGTCAGCGGCGGCGAGCACTGTATTGCTATCACCGACGACAGCGCGACAGTGGCTAACAAGGGCGCCAAGACCGTCACCGATCCAGAGGCCATCAGTATCCAGATTGGCGGCGACCGGGCCGTCGTCAATAACGAAGGCTAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGa                                                                                                                                                                  <  2:28163/289‑1 (MQ=255)
                                                                                                                     gccACCTGGACGGAATGTGGTGGTAATAACGGTAAAGTGATGAGGGACGGTGATCGGGATGTCAGCGGCGGCTGTCACGGTATTGATATGTCCGGCGACAGCGCAACGGTGGATAACAAGTGCACCATGGCCGCTATCGATCCGGAGTCCATCGTTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGTGAACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGa                                                                                                                                                                  <  2:981210/287‑1 (MQ=255)
                                                                                                                      ccACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGCCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGTCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCCCTGTTGCTGGaaa                                                                                                                                                                >  1:1157142/1‑289 (MQ=255)
                                                                                                                      ccACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGaaa                                                                                                                                                                >  1:208381/1‑289 (MQ=255)
                                                                                                                       caacgttACGGAAATTGCTGGCAATAACGGCAAGGTTGTTCAGGAAGGCGATCTGGATGTCAGCGTCGTAGGTAACGGTTTTGATATGACCGGCGACAGCTCAACAGTTGATAACAAGGTAACCTTGACAGTCACCGATCTGGAGTCAATCGGTATCCAGATTGACGGCGACCAGGCCATCGTGAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGAACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGaaaa                                                                                                                                                               <  2:665178/283‑1 (MQ=255)
                                                                                                                            gTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGAtt                                                                                                                                                           >  2:1150006/1‑288 (MQ=255)
                                                                                                                             tACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCCCC‑CCGAATAACAGTGGAAAAACCACTGGTGATGGAAAAGATTc                                                                                                                                                          >  2:1227713/1‑288 (MQ=255)
                                                                                                                                 gAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACgg                                                                                                                                                     >  1:124148/1‑289 (MQ=255)
                                                                                                                                  aaaTTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGAACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATACCAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACggg                                                                                                                                                    >  1:546077/1‑289 (MQ=255)
                                                                                                                                    aTTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGCTCAACGGTAACGACGCCACC‑GCGAATAACAGTGG‑AAAACCACTGTTGATGGAAAAGATTCCACGGGTAc                                                                                                                                                 >  2:955847/1‑289 (MQ=255)
                                                                                                                                       gacggtaaTAACGGTCAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCCGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTTGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCa                                                                                                                                               <  1:890805/283‑1 (MQ=255)
                                                                                                                                       gCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCa                                                                                                                                               >  1:1251612/1‑289 (MQ=255)
                                                                                                                                           gCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCaaaa                                                                                                                                            >  1:360797/1‑288 (MQ=255)
                                                                                                                                                          tGATTCAGAACGGCGATCTTGATGTCCGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGTGCACCATGACCGTCGCCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAATGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCgg                                                                                                                            <  2:786403/289‑1 (MQ=255)
                                                                                                                                                           ggttaaGGACGGCGATCTGGGTGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAAGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCgg                                                                                                                            <  2:225297/283‑1 (MQ=255)
                                                                                                                                                            aTTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCa                                                                                                                          >  2:629150/1‑289 (MQ=255)
                                                                                                                                                             ttCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCAt                                                                                                                         >  2:56253/1‑289 (MQ=255)
                                                                                                                                                                  gACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTaa                                                                                                                    >  1:962378/1‑289 (MQ=255)
                                                                                                                                                                                    aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGa                                                                                                  <  2:124148/289‑1 (MQ=255)
                                                                                                                                                                                    aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGACGGTAGCCTGa                                                                                                  >  1:376339/1‑289 (MQ=255)
                                                                                                                                                                                      cggcggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCGGGCCATc                                                                                                                                                                                                                                                                            <  1:16707/118‑1 (MQ=37)
                                                                                                                                                                                      cggcggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATc                                                                                                                                                                                                                                                                            >  2:16707/1‑118 (MQ=37)
                                                                                                                                                                                        gcggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCGGTCGTCAATAACGAAGGCGAGAGCACTATCACCAACGGCGGCACCGGCACGCAGATCAACGGTGACGCCGCCACG‑GCGCATAACAGCGGAAAAACCCCTGTTGACGGAAAAGATTCCACGGGTACGCAAATCGCGGGCAATATCGGCATGGTCAATCCGGATGGCCGCCTGGCTgg                                                                                              >  2:456399/1‑288 (MQ=14)
                                                                                                                                                                                                cACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGGCACCGATCCGGAGTCCAGCGGTATCCAGATTGACGGCGAACGGGCAATAGTGAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGc                                                                                       <  1:40800/288‑1 (MQ=255)
                                                                                                                                                                                                       ttgatggtcccGGCGACAGCGAAACGGTGATAAACAACGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTTAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGCAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               <  1:502552/280‑1 (MQ=25)
                                                                                                                                                                                                       ttGATTTCACCGGCGACAGCGCAACGATGTATAACAAGTGAACCATGCCCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGACATCGTCAATAACGAAGGCGAGAGCACTACCACCAATGGCGGCACCGGCACTCAGATCAACGGTAAAGACGCCACC‑GCGAATAACAGTTGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGAAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               <  2:1094169/289‑1 (MQ=25)
                                                                                                                                                                                                       ttGATATCCCCGGCGACAGCGCACCCGTGAGTAACAAGGGCACCATGAACGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACTGCGACCAGGCCATCGTCAATAACGAAGTCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               <  2:1025211/289‑1 (MQ=255)
                                                                                                                                                                                                       gtGATATCACCGGCGAAAGCGCAAAGGTGGGTAACAAGGGAACCATGACCGTCACCCAGCCGGAGTCCATCGGTATACAGATTGACGGCGACCAGGCAATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               <  2:496758/288‑1 (MQ=255)
                                                                                                                                                                                                         gATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATg                                                                             <  2:208381/289‑1 (MQ=255)
                                                                                                                                                                                                               aCCGGCGACAGCGGAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGtt                                                                        <  1:96744/288‑1 (MQ=255)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTc                                                                                                                                                                                                                                                                         >  2:952690/1‑96 (MQ=21)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGAcc                                                                                                                                                                                                                                                                                    <  2:1238573/85‑1 (MQ=33)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               <  1:829721/281‑1 (MQ=255)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               >  2:829721/1‑281 (MQ=255)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTg                                                                       >  1:1013392/1‑289 (MQ=255)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTg                                                                       >  1:1060023/1‑289 (MQ=255)
                                                                                                                                                                                                               aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGAATGGTGTTg                                                                       >  1:1094169/1‑289 (MQ=255)
                                                                                                                                                                                                                   gCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGaa                                                                   >  2:62622/1‑289 (MQ=255)
                                                                                                                                                                                                                          cgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGATCGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACTCAGATTAACGGTAAAGACGCCACG‑GCAAATAACAGCGGCAAAACCACTGTTGATGGAAAGGATTCCACGGGTACCAAAATTGCGGGCAATAACGGGATTGTGATTCTGGACGGCAGCCTGACTGTCACCGGAGGTGCGAACGGTATTGAGAAAATTGGt                                                            >  2:69837/1‑289 (MQ=11)
                                                                                                                                                                                                                                   tgaaaaCAAGCGCACCATGACCGTCACCGATCCGTGGTCCATGGGGAGCCAGGTGTACGGCAACCAGGCCATCGTCAATAACGAAGGCGAGAGGACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACgg                                                    <  2:1067782/284‑1 (MQ=255)
                                                                                                                                                                                                                                    gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               >  2:622615/1‑260 (MQ=255)
                                                                                                                                                                                                                                    gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCa                                                                               <  1:622615/260‑1 (MQ=255)
                                                                                                                                                                                                                                    gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGGGCGCATGGTTTTGCGAACATTGGTGACAACGGc                                                   >  2:816661/1‑288 (MQ=255)
                                                                                                                                                                                                                                     gtgaCAAGGGCACCATGACCGGCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACTAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGGAACGACGCCACC‑GAGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAAGCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCa                                                  <  2:519353/285‑1 (MQ=255)
                                                                                                                                                                                                                                     aTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCa                                                  <  1:69837/288‑1 (MQ=255)
                                                                                                                                                                                                                                     aTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATGGACGGCGACCATGCCATCGTCAATAACGAAGGCTAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCa                                                  <  1:1322620/288‑1 (MQ=255)
                                                                                                                                                                                                                                     aTAACAAGGACACCATGACCGTCACCGATCCGCAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAACATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCa                                                  <  1:21611/288‑1 (MQ=255)
                                                                                                                                                                                                                                         cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGtt                                             <  1:1150006/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGtt                                             <  1:664518/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cAAGGGCACCAGGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGtt                                             <  1:456399/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gggCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGCGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAACGGCGGCACCGGCACCCAGATCAACGGTAACGACGCCACG‑GCGAATAACAGCGGCAAAACCACTGTTGATGGCAAGGATTCCACGGGTACCAAAATCGCCGGCAATAACGGCATTGTAAATCTGGACGGTCACCTGGCTGTTACAGGCGGGGCGTATGGTGTTTAGAACCTTGGTGACAACGGAACGGTTaat                                          >  2:868241/1‑288 (MQ=18)
                                                                                                                                                                                                                                            gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTGACGACGCCACC‑GCGAATAACAACGGAAAAACCACTGTTGATGGAAAGGATTCCACGGGTACCAAAATCGCGGGCAATAACGGCAATGTGAATCCGGATGGTAGCCTGACTGTTACAGGCGGTGGGCATGGATTTGATAACACTggccgtggcttatacgactat                                          >  2:96744/1‑270 (MQ=17)
                                                                                                                                                                                                                                            gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATg                                                                             <  1:486099/254‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATACCGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAAAGGAGCGGTTAAcaacaa                                     >  2:1294714/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  cATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACaaa                                    <  1:629150/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACaaa                                    >  1:1035925/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       ccGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGagag                                                                                                                                                                                                                                                        <  2:438548/73‑1 (MQ=255)
                                                                                                                                                                                                                                                           cACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAgg                                  >  1:1044814/1‑282 (MQ=255)
                                                                                                                                                                                                                                                           cACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAgg                                  <  2:1044814/282‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGgt                                                                           >  2:277428/1‑240 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGgt                                                                           <  1:277428/240‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATAttg                          >  1:131956/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              cGATCCGGAGGCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATAttgtt                        <  1:870344/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              cGATCCGCAGTCCAGCGGTATGCAGGTGGACGGCGACCAGTCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATAGCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATAttgtt                        <  2:546077/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cGGAGTCCATCGGTATCCAGATTGACTGCGACCAGGCCATCGGCAATAACGAAGGCGATAGCACTATAACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTc                   <  2:252179/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTc                   <  1:868241/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTc                   <  2:1035925/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTc                   <  1:56253/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCg                 >  2:1113320/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAgg                                  >  2:529147/1‑267 (MQ=255)
                                                                                                                                                                                                                                                                          cATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGAt               >  2:1175684/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                           aTCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGCTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGGGATATTGTTGTTTCCGATATTg           >  2:301303/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTgg          >  1:612980/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                              
GCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTGGATCGATTG  >  NC_000913/1466577‑1467141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A