Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,845,038 T→G 17.9% V359G (GTG→GGG)  adeD → cryptic adenine deaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,845,0380TG17.9% 271.9 / 3.4 122V359G (GTG→GGG) adeDcryptic adenine deaminase
Reads supporting (aligned to +/- strand):  ref base T (48/45);  new base G (24/5);  total (72/50)
Fisher's exact test for biased strand distribution p-value = 4.37e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 122 total aligned reads displayed.

TGCTCTGTACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCGATGATGT  >  NC_000913/3844801‑3845272
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
gggtttGTACCGGTGCCCGTAACCCGGGGGAGACCGCCCATGAAGGCACCATGGTGGCCTTAATTCGCCGCCTGATCGAACAACACAAGGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTg                                                                                                                                                                                                                                            <  2:554724/234‑1 (MQ=255)
 gcTCTGTACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCCCTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAGGGTCACGGTGCAGCAGGTACGGGTGa                                                                                                                                                                                                                                           >  1:805296/1‑239 (MQ=255)
   tctGTACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCCCGGCTTACTGGCACCCGGCAAGCAGGCCGCTATCGTCCCGTTGAGCGCGGCGCGTAAGGTCACGGGGCCACAGGTACGGGGGaaa                                                                                                                                                                                                                                         >  2:388246/1‑239 (MQ=255)
    ctGTACCGATGACCGTAACCCGTTGGAGATCGACCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACACCACAATGTGCCGCTGCATCGGGCATATCGCTTCGCCAGCTGGCCGACGGCGCGCCCCTTTGGTCTGAATCACCTCGGCTTACTGGCCACCGGCAAGCAGGCCGACACCCTCCTGTTACACACAGCGGTTAAGGTCACGGGTCAACAGGGACTGGGAAAAg                                                                                                                                                                                                                                        >  2:871383/1‑239 (MQ=255)
       tACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCg                                                                                                                                                                                                                                     >  1:755858/1‑239 (MQ=255)
       tACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACGTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGAAGGCCGATATCGTGCTTTTATGCGATGCGCGCAAGGGAACGGTGCAGCAGGAACTGGGGAAAAGCg                                                                                                                                                                                                                                     >  2:116023/1‑239 (MQ=255)
        aCCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCCGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTAATGGGGAAAGGCGa                                                                                                                                                                                                                                    >  1:755210/1‑239 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCCCTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCTGATATCGTCCTGTTGAGCGATGCCCGTACGGTCACGGTGCCGCAGGTACTGGGGAAAGGCGAGCCGATTgc                                                                                                                                                                                                                           >  1:412230/1‑238 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAGGCAGGCCGTTTTCGTCCTGTTTAGAGATGCGGGTAAGGGCCCGGTGCAGCAGGAAATGGGGAAAGGGGGGCCggtgga                                                                                                                                                                                                                           >  2:983549/1‑234 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTTTTGAGCGATGCGCGTAAGGGCCGGGGGAGGCAGGGACTGGGGaaaaggaagacgatgga                                                                                                                                                                                                                           >  2:377028/1‑225 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGCTGCGCGTAAGGCCACGGTTCAGCAGGCACTGGGGAAAGGCGAGCCGATTgt                                                                                                                                                                                                                           >  1:994122/1‑238 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGGGCAGCGGGACCTGGGGAAAGGCGAGCGGATTGa                                                                                                                                                                                                                           >  1:121730/1‑239 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGAATCGCGTACGGGCCCGGTGCAGCCGGGACTGGGGAAAAGCGAGcgggtgat                                                                                                                                                                                                                           >  2:453383/1‑232 (MQ=255)
                 cGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCGGTTGAGCGATGCGCGTAAGGTCACGGGGGAGCAGGTACTGGGGAAAGGCGAGCCGATTGa                                                                                                                                                                                                                           >  2:800944/1‑239 (MQ=255)
                      cccggggggtgtCGCCCAAGAAGGCCCCATCGAGGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCTCGGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATgcgc                                                                                                                                                                                                                      <  2:330169/228‑1 (MQ=255)
                       ccGGGGGGGATCCCCCGTGAAGGACCCACCGATGCCTTAATTCCCCCCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCa                                                                                                                                                                                                                     <  2:608300/239‑1 (MQ=255)
                       ccGGGGGCGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCCCCTGATCGAACAACACAATGGGCCCCTGCATGTGGCATTCCGCGTCGCCAGCGGGTCGACGGCGCGCCACTTTGGTCTGAATCTCCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCa                                                                                                                                                                                                                     <  2:222418/239‑1 (MQ=255)
                       ccGGGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCa                                                                                                                                                                                                                     <  1:60616/239‑1 (MQ=255)
                          tGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCaaa                                                                                                                                                                                                                   >  1:158506/1‑238 (MQ=255)
                          tGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGAACTGGTGAAAGGGGAGCCGATTGATGCGCaac                                                                                                                                                                                                                   >  1:763837/1‑237 (MQ=255)
                          tGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGCGCCCGGTGCCACCGGAACTGGTGAAAGGCGGGCGGGTTGATGCGCaaa                                                                                                                                                                                                                   >  2:360063/1‑238 (MQ=255)
                          tGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTAAGCGATGCGCGTAAGGCCACGGGGCAGCAGGTCCTGGTGAAAGGCGAGCCGATTGATGCGCaaa                                                                                                                                                                                                                   >  1:254501/1‑238 (MQ=255)
                          tGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCGGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCGGTTGAGCGATGCGCGTAAGGTACCGGTGCAGCAGGGCCCGGGGAAAGGCGGGCCGGTTgggcggaaaa                                                                                                                                                                                                                   >  2:902909/1‑229 (MQ=255)
                                aTCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTCCTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGTTGCGCGTAAGGTCACGGTGCAGCAGGTACTGGGGAAAGGCGAGCCGATTGATGCGCAAACCTTACa                                                                                                                                                                                                            >  2:374246/1‑239 (MQ=255)
                                 tCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAg                                                                                                                                                                                                           >  1:130376/1‑239 (MQ=255)
                                 tCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAg                                                                                                                                                                                                           >  1:688065/1‑239 (MQ=255)
                                               cccaTCGATGCCTTAATTCGCCGCCTGATCGAACAACCCAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGc                                                                                                                                                                                            <  1:861519/237‑1 (MQ=255)
                                               cccaTCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGGGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGc                                                                                                                                                                                            <  1:587321/237‑1 (MQ=255)
                                                 caTCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGGGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCggggg                                                                                                                                                                                          >  2:582567/1‑236 (MQ=255)
                                                   tgggtgcctattctCGCCGCCTTATCGAAACAGAGAATGGGGCTCTGCATTGGGCATTGCGCGGCGCCAGCTGGTCGACGGCGCGCCGCTTTGGTCTGAATCACCTCGGTTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGGGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCgaga                                                                                                                                                                                        <  2:746520/226‑1 (MQ=255)
                                                    cGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGGACTGGTGAAATGCGGGCCGATTGATGCGCAAGCCTTACAGGCGG‑GAGAGTCGGCGAGAc                                                                                                                                                                                       >  1:503672/1‑239 (MQ=255)
                                                       tGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGGGAAAGGCGAGCCGATGGATGCGCAAACCTTACAGGCGGAAAGAG‑GGGCGAGACTgg                                                                                                                                                                                    >  2:8574/1‑239 (MQ=255)
                                                          cTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCCCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCCGGCCGATATCGTCCCGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAACCGCTTGTTGCGCAAACCCTACCGGCGG‑AAAAGACGGCGAGACTGGccc                                                                                                                                                                                 >  2:80354/1‑237 (MQ=255)
                                                              aTTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGGGCAGCAGGTACTGGGGAAAGGCGAGCCGGTTGATGGCGAAACCTTACAGGCGG‑GAGAGACGGGGGGACTGGCACAAt                                                                                                                                                                              >  2:581074/1‑238 (MQ=255)
                                                                gccccgccTGATCCAACAACACAATGGCCCCGTGCATGTGGCATAGCGCGGCGCCAGCTGGTCGACGGCGCGCCACTTGGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAACCCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAAtccg                                                                                                                                                                           <  1:10734/236‑1 (MQ=255)
                                                                   ccgccTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCCCCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATTCCCGTAAGGTCCAGGTGAGTCGGGTACGGGTGAAAGGACAGCCGATTGATGGCCAAACCTTACAGGCGG‑AGACGGCGGCGGGATGGGCCCAAaccgcc                                                                                                                                                                         >  2:362674/1‑237 (MQ=255)
                                                                   ccgccTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGCCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGGTTGATGCGCAAACCTTACCGGCGG‑AAGAGTGCGGGAGACTGGCACaagacccc                                                                                                                                                                         >  2:1020412/1‑232 (MQ=255)
                                                                     gccgtgtccaacaacACAATGTGCCGCTGCATGTGGCATATCGCTGCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAAtccgctccg                                                                                                                                                                      <  1:802462/230‑1 (MQ=255)
                                                                      ccTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGGGAAAGGCGAGCCGATTGATGCCCAAACCTTAAAGGCGG‑AAGAGTCGGCGAGACTGGCACAAccccccccc                                                                                                                                                                      >  2:945919/1‑232 (MQ=255)
                                                                       cTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGGGACGGCGAGACTGGCCCAATCCGCTCCGcc                                                                                                                                                                    >  1:706016/1‑239 (MQ=255)
                                                                        tGACCGAACAACACAATGGGCCGCTGCATGTGGCATACCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCa                                                                                                                                                                   <  1:301165/239‑1 (MQ=255)
                                                                         tgtCGAACACCACGATGTCCCCCTGTATGGGCAATACCGCGTGGCCAGGTGGTCGCGGGCCCGCCCTTTTGGTTTGAATCCCCTGGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTGGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCat                                                                                                                                                                  <  2:174929/237‑1 (MQ=255)
                                                                           tCGAACAACACAATGGGCCGCGGCATGTGGCATATCGCGTCGCCAGCTGGGCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCata                                                                                                                                                                 <  1:902909/238‑1 (MQ=255)
                                                                           ccGAACAACACAATTGGCCTCTGCTTGTGGCCTATCGCGTGCCCAGCTGGTCGACGGCGCGCCCCTTTGGTCTGAATCCCCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCata                                                                                                                                                                 <  2:121730/237‑1 (MQ=255)
                                                                             gAACAACCCAATGTGCCCGTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATgg                                                                                                                                                              <  1:377028/239‑1 (MQ=255)
                                                                             aaacaccACAATGTGCCCGTTCATGTGGCATAGCGGGGCGCCAGCGGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATgg                                                                                                                                                              <  2:130376/238‑1 (MQ=255)
                                                                                      aaTGGGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCa                                                                                                                                                                   <  1:293836/225‑1 (MQ=255)
                                                                                           gCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGGGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGAATGGCCCAAACCGCTCCCCCATATGGCAACACCCTTcccc                                                                                                                                                >  1:427646/1‑239 (MQ=255)
                                                                                             cggtGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCtt                                                                                                                                                                                                               <  2:245932/172‑1 (MQ=255)
                                                                                             cGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCtt                                                                                                                                                                                                               >  1:245932/1‑175 (MQ=255)
                                                                                                    tgtgGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTCCAGGCGG‑AAGAGTCGGCGGGACTGGCACAAACGCCTCCGCCCTATGGCAAAACCCTTGCCCcccggcccg                                                                                                                                       >  1:834669/1‑237 (MQ=255)
                                                                                                    tgtgGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTCACGGCGG‑AAGAGTCGTGGGGGCTGGCACAATCCGCCCCGCCATATGGCAACAACATTGCCCCcccgccag                                                                                                                                       >  2:152434/1‑239 (MQ=255)
                                                                                                       ggCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCAGCGGGACTGGCCCAAACCGCCCCCCCATAAGGCAACACCATTGCCCGcccgccaggt                                                                                                                                     >  2:32552/1‑236 (MQ=255)
                                                                                                            atgcggTCGCCAGCTGGCCGACGGCGCGCCACTTTGGTCTGAATCCCCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGcc                                                                                                                               <  1:1020412/234‑1 (MQ=255)
                                                                                                            atCGCGTCGCCAGCTGGTCGGCGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGGGACTGGCACAATCCGCTCCCCCACATGGCACCACCATTGCCCCCCAGCCACTTTCCGcc                                                                                                                               >  2:675781/1‑239 (MQ=255)
                                                                                                            atCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGGGACGGGCACAAACCGCCCCCCCCTATGGGAAAACCCATCCCCGCCACCCAATTTCcccc                                                                                                                               >  2:363712/1‑239 (MQ=255)
                                                                                                            atCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGGCGGCGAGACTGGCACAATCCGCTCCGTCATATGGCAACACCATTGGCGGCCAGCCCGTTTCCGcc                                                                                                                               >  1:928700/1‑239 (MQ=255)
                                                                                                              gccccccccgctgggccggtgcggcgcCTTTTTGGTCTGAATCCCCTAGGCTTCGGGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAg                                                                                                                             <  2:427646/216‑1 (MQ=255)
                                                                                                                                      cgcCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGGGTCGGGGAGACTGGCACAATCCGCTCCGCCATATGGCCACACCATTGCCCGCCAGCCAGGTTCCGCCAGCGACTTTTCCCTGCAAtttgagcc                                                                                                     >  2:643166/1‑234 (MQ=255)
                                                                                                                                      ccccACTTTGGTCTGAATCCCCTCGGCTTACTGGCCCCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGc                                                                                                      <  1:832001/236‑1 (MQ=255)
                                                                                                                                      acccACTTTGGTCTGAATCACCCCGGCTTACTGGCACCCGGCAAGACGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGc                                                                                                      <  1:689440/236‑1 (MQ=255)
                                                                                                                                         cACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCg                                                                                                   <  1:388246/238‑1 (MQ=255)
                                                                                                                                              tGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑CAGAGTCGGCGAGACTGGCACAAACCGCTCCGCCCTATGGCAAAACCATTGCCCGCCAGCCAGTTTCCCCCACCGGCTTTGCCCTGCAATTTACGCCCGGaaaa                                                                                              >  1:584721/1‑238 (MQ=255)
                                                                                                                                                   gtatcccccgcGGCTTACGGGCCCCCGGCAAGGGGGCCGATGTCGTCCTGTGGGGGGGTGGGGGTAAGGTCACGGGGCAGCAGGGACGGGTGAAAGGCGAGCTGATTGATGCGCAAACCTTGCAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTAt                                                                                        <  2:228872/229‑1 (MQ=255)
                                                                                                                                                     aaTCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCCCAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGCCTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCg                                                                                      >  1:124190/1‑239 (MQ=255)
                                                                                                                                                     aaTCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACTCCCGGAAAACGCTATcc                                                                                      >  1:308160/1‑238 (MQ=255)
                                                                                                                                                      aTCCCCTGGGCTTACGGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCgg                                                                                     <  1:453383/239‑1 (MQ=255)
                                                                                                                                                          ccTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCCGTTTCCGCCAGGGACTTTGCCCTTCAATTTACGCCCGGAAAACGCTATCGGGTCa                                                                                 >  1:1019702/1‑239 (MQ=255)
                                                                                                                                                                 ttACTGGCACCGGGCAAGCAGGCCGATAGCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACg                                                                           <  1:428507/238‑1 (MQ=255)
                                                                                                                                                                   aCTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCCTTGCCCGCCCGCCAGTTTCCGCCCGCACCTTTGCCCTGCAATTTACGCCCGGCAAACCCCAACGGGCCAtttcagccc                                                                        >  2:248700/1‑232 (MQ=255)
                                                                                                                                                                   aCTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCCATCGGGTCATTGACGTc                                                                         >  1:1044444/1‑238 (MQ=255)
                                                                                                                                                                    cTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGGGAGACTGGCCCAATCCGCTCCCCCAAATGGCAACACCCTTGCCCGCCAGCCCGGTTCCGCCAGCGACTTTTCCCTGCAATTTACCCCCGGAAAAAGCTAACgggcaatttagttaa                                                                        >  2:731504/1‑226 (MQ=255)
                                                                                                                                                                             ggCAAGCGGGCCGATATCGTCCTGTTGGGCGATGCGCGTAAGGCCACGGTGCAGCGGGTACTGGTGAAAGGCGGGCCGATTGATGCGCAACCCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGa                                                              <  2:755858/239‑1 (MQ=255)
                                                                                                                                                                                        ggattgcgcccgttggggcggggcgcGATAGGTCCCGGGGCAGCGGGTACTGGGGAAAGGGGGGCCGATTGATGCGCAAACCTTCCAGGCGG‑AAGGGTCGGCGGGACTGGCACAACCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGc                                                   <  2:308160/217‑1 (MQ=255)
                                                                                                                                                                                        cGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGc                                                   <  1:889979/239‑1 (MQ=255)
                                                                                                                                                                                         gATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGc                                                   <  1:363712/238‑1 (MQ=255)
                                                                                                                                                                                             tCGTCCTTTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGcactcc                                              <  1:32552/239‑1 (MQ=255)
                                                                                                                                                                                             tCGTCATGTGGAGCGAGGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGcactcc                                              <  1:234351/239‑1 (MQ=255)
                                                                                                                                                                                                 cctttgggggggggggcgTAAGGCCACGGGGCAGCAGGTAGTGGTGAAAGGGGAGCCGATTGAGGCGCAAACCTTCAAGGCGG‑ACGGGTCGGCGAGCCTGGCACAATCCGCCCCGCCATATGGCAACCCCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGcactcccact                                          <  2:688065/224‑1 (MQ=255)
                                                                                                                                                                                                 ccTGGTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGcactcccact                                          <  1:675781/239‑1 (MQ=255)
                                                                                                                                                                                                   tgtgGAGGGATGGGCGTAAGGGCACGGTGCAGGAGGTACTGGGGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGGGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGcactcccactcc                                        <  1:800944/239‑1 (MQ=255)
                                                                                                                                                                                                     ttGAGCGATGCGCTTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACCCCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGcactcccact                                          <  1:782185/235‑1 (MQ=255)
                                                                                                                                                                                                     ttGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGGCATTGACGTCATCCCTAACGAATTGATTACGcactcccactcccg                                      >  1:136286/1‑237 (MQ=255)
                                                                                                                                                                                                          cGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACCCCAGCGTCt                                 >  1:570540/1‑239 (MQ=255)
                                                                                                                                                                                                               cgcgTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGGGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGACCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGCATTGATTAACGACCCCCACCCCACCGTCTa                                >  2:782185/1‑235 (MQ=255)
                                                                                                                                                                                                               cgcgTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGCGACTGGCGCAATCAGCTCCCCCATATGGCAACACCATTGCCCGCCCGCCAGTTTCCGCCCGCGACTTTGCCCTGCAATTTACGCCCGGACAACGCTATCCGGGCATTACCATCTCCCATAACAAACTGTTTACCCACTCCCAACCCACCGTGCACAGc                            >  2:873378/1‑239 (MQ=255)
                                                                                                                                                                                                               cgcgTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACg                                                                           >  2:388557/1‑192 (MQ=255)
                                                                                                                                                                                                               cgcgTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACg                                                                           <  1:388557/192‑1 (MQ=255)
                                                                                                                                                                                                                    aaGGTCACGGTGCAGAGGGTATGGGTGAAGGGCGGGCCGATTGAGGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGaaa                        <  2:1044444/238‑1 (MQ=255)
                                                                                                                                                                                                                    aaGGGCTCGGGGCAGCAGGTACTGGGGAAAGGCGAGCCGATTGAGGGCCAAACCTTACAGTCGG‑AAGAGTCGGCTAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGaaa                        <  1:983549/238‑1 (MQ=255)
                                                                                                                                                                                                                          aCGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAAAACCATTGCCCGCCAGCCAGTTTCCGCCAGCGCCTTTGCCCTGCAATTTAAGCCCGGAAAACGCTATCGGGTCATTGACGGCCTCCCTAACGAATTGATTACCCCCTCCCACTCCAACGTCTACACGGCAAAAGGttt                 >  2:277869/1‑239 (MQ=255)
                                                                                                                                                                                                                                       tACTGGTGAAAGGCGAGCCGATTGAGGCGCAAACCGTACAGGCGG‑AAGAGCCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCgatga     <  1:248700/238‑1 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTTGTTACGCCACCCCACTCCACCCGCCCAAGGGAAAATAGGTTTTATCCGGatgatg   >  2:690180/1‑239 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACg                                                    <  2:1006596/190‑1 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACg                                                    >  1:1006596/1‑190 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGGGTCTACAGCGAAAATGGATTTGATCGCGatgatg   >  1:475019/1‑239 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCCATCGGGTCATTGACGCCATCCATAACGAATTGATTACGCACTCCCACCCCCACGCCCCCAGCGAAAATGGtttttttggcgagggtg   >  2:911497/1‑226 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAAAGCTATCGGGTCATTGACGTCATCCCTAACGAATTGATTACGCACCCCCACTCCAGCGTCAACACGGAAAAAGGTTTTTATcgcggggttg   >  2:1023899/1‑233 (MQ=255)
                                                                                                                                                                                                                                        aCTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCCCCGCCATATGGCAACACCCTTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGCGTCATTGCCGTCATACATAACGAATTGATTTCGCACCCCCCCTCCCGCGCACCAAGCGAAAATCGATTTGAACCCgaggaga   >  2:186279/1‑237 (MQ=255)
                                                                                                                                                                                                                                         cTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGGCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCGATGAtgt  <  1:730543/239‑1 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
TGCTCTGTACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGG‑AAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCGATGATGT  >  NC_000913/3844801‑3845272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A