Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,915,852 |
T→G |
15.3% |
A40A (GCA→GCC) |
atpC ← |
F1 sector of membrane‑bound ATP synthase, epsilon subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,915,852 | 0 | T | G | 15.3%
| 234.7
/ 3.1
| 100 | A40A (GCA→GCC) | atpC | F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| Reads supporting (aligned to +/- strand): ref base T (14/64); new base G (19/2); total (34/66) |
| Fisher's exact test for biased strand distribution p-value = 1.11e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATG > NC_000913/3915617‑3916085
|
gccccTGGGCGTATTTTACGTCGCCGGGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGc < 2:886455/235‑1 (MQ=255)
aCGCCTGAGCTTAATCTACGTCGCCTGTAGGGCTGCTAATGTGCTCTTCAGCCTTACGGTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGc < 1:942732/238‑1 (MQ=255)
ctgggggTAATCTCCGTCGCCGTGGGAGCTGTTAAGGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGc < 2:1048175/233‑1 (MQ=255)
cTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGc < 1:954472/239‑1 (MQ=255)
gCGTAATCTTCGTCGCCGTGAGGGCTGCTAATGGGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAg < 1:145528/238‑1 (MQ=255)
aaTCTACGTCGCCGTTAGAGCTTCTAATGTGCTCTTCAGCCTTACCGTTCGCTTCCATGGCTCGCGCTTCGTCGAACTCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAg < 1:442164/239‑1 (MQ=255)
tCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAAGTGC‑GGGGGGCAGCGGGGGGGGGGCAggggaaa > 2:451662/1‑234 (MQ=255)
gTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCGGCGGGGGCGGGCCCGGGTGGG‑Tccccc > 1:994904/1‑238 (MQ=255)
gCCGTGAGGACTTCTAATGTGGCCTTCCGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGtt < 1:1019352/239‑1 (MQ=255)
cGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCCTGCTGGTTAACCATGCGAATCAAACCAGGCTTAATGGC‑GGTGGGCAGCGGGGCGGGGCCAGAGAGGA‑AACCCAGtta > 2:1052213/1‑237 (MQ=255)
ggtagagCTGCTAATGTGCGCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGGGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCAc < 1:592483/236‑1 (MQ=255)
gggggggctccttttgtgCTCTTCCGTTTTCCGTTTCGCTTCCATGGTTCGCGCGTCGTCGAGAGCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCAc < 2:493628/225‑1 (MQ=255)
ctgggacgtgctatgttgCGCTTCCTCCTTGCGTTGCGCGTCCCGGGGCCGCGCTCCGACGAGAACCGGGCCGCGAATGGGGGTGTCGGCCAGAACGGTCCCGTTGCCAGGCTGCTCTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGGGCTGTTTTACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCAc < 2:437347/223‑1 (MQ=255)
ggtgctAATGTGCTTCTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCg < 1:897457/236‑1 (MQ=255)
tAATTTGCTCTTCAGCCTTACGTTTCGCGTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑Acc < 1:574929/238‑1 (MQ=255)
ttctctTCCGCCTTTCGTTTCGCTTCCTGGGGTCGCGCTTCGGCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑CCGCT‑ACCCGTTAc < 2:556886/237‑1 (MQ=255)
tgCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGc < 1:961652/197‑1 (MQ=255)
ctctTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGGTGAGCGGGGCGGGGCCAAGGGACATTCCCAAGTTC‑CCT‑TTGCT‑Accccgtg > 1:677437/1‑232 (MQ=255)
ctctTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGGGGGCAGGGGGGGGGGGCCAGGGGAGA‑TTCCCCGTTCCCCC‑TCTCT‑ACCCGTTAcgc > 2:924465/1‑237 (MQ=255)
ctctTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGATTAATGGCGGGGGAGCGGCGGTGCGGGGCCAGGAAAAA‑TCCCCAGTAAACCT‑GCGCA‑Accagggccg > 2:462155/1‑232 (MQ=255)
ctTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGGGCACAGGTGCGTGGCCAGGGTGAA‑ACCCCAGTTCACCT‑TCGCG‑ACCCCGTTCCTgg > 1:321857/1‑239 (MQ=255)
ttCAGCCGTACGTTTCGCTTCCATGGCCCGCGCTTCGTCGATGTCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGa < 1:503952/239‑1 (MQ=255)
cAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGTGAATCATACCAGGCTTAATGCC‑GCTTGTCAGAGGTGCGGGGCCCGGGAGGA‑TCCCCCGTTCACCT‑TCCCT‑TCCCCTTACCCgggat > 1:664575/1‑236 (MQ=255)
cgtttcgtttCCCCTGCCCGCGCTTCGTCGGGATCCCGGCCGCGAATTGGGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCgac < 2:994904/239‑1 (MQ=255)
cGTTTCGCTTCCATGGGCCGGGTTTCGTCGGAGTCCTGGCCGGGAATTGCGGTGGCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCgac < 2:17444/239‑1 (MQ=255)
cGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACCGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACAAGGCTTAATGGC‑GGTGAGCAGGGGGGCGGGGGCAGGGTAGA‑TCCCCAGATCACCT‑TCGCT‑ACCCGTTTCCCggggtttttttg > 1:244545/1‑228 (MQ=255)
cGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCgac < 1:924142/239‑1 (MQ=255)
ttCGGTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACTGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCgacca < 1:292041/238‑1 (MQ=255)
cGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGGGCAGCGGGGGGTGGCCCAGGGGGA‑TACCCCGTTTCCCT‑TTCCT‑TCCCCGTACCCGGAGTTtttctgcccaa > 1:17444/1‑231 (MQ=255)
cgttCCATGGCCGCCGGTTCGTCGGAATCCTGGCCGGGAATTGCGGTGT‑GGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCgaccagacca < 1:759547/237‑1 (MQ=255)
cTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGCCCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCGTCGGGGCGTGGCCAGGCGAGA‑TCACCCGTTCACCC‑TCGCC‑CCCCGCTCACCGGAGTTTTTCtaccagaaca > 2:186066/1‑239 (MQ=255)
cTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGTACATCGGTGCGTGGCCCGGGGAGA‑TCCCCAg > 1:698127/1‑196 (MQ=255)
ttCCATGGCTCGCTCTTCGTCGAGTTCCTGGCCGCGAATTGCGGTGGCGGCCAGAACGGTACCGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGaccagaccag < 2:321857/239‑1 (MQ=255)
ttCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCgaccagacca < 1:413874/238‑1 (MQ=255)
ttCGTCGAGATCCTGGCCGGGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGct < 2:145315/239‑1 (MQ=255)
ttCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGct < 1:800336/239‑1 (MQ=255)
tCCTGGCCGCGAATTGGGGTGGCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTgac < 1:1052213/239‑1 (MQ=255)
tCCGGGCCGCGAAGTGCGGTGTCGGCCAGAACGGTCCCGTTGGCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGGGAGCAGCGGTGCGTGGCCAGGGTACA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTGTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTgac < 1:90785/239‑1 (MQ=255)
ccTGGCCGCGGATTGCGGTGCCGGCCAGGACGGTCCCGTTGCCAGGCTGCCCTTCAAGAAGGCCGCCAGACAGATAGATAAACTCTTCGGGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTgacg < 2:539253/239‑1 (MQ=255)
tGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTgacg‑ac < 2:382829/239‑1 (MQ=255)
cgcgAATTGCGGTGTCGGCCAGAACGGGCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGGCAGTTAGATAAACTCTTCGGTACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTc < 1:73371/238‑1 (MQ=255)
gacaaTTGCGGTGTCGGCCAGAACGGTCCCGTTGCCAGGCTGCACGTCAAGAATGCCGCCAGACAGATGGATAAACTCTTCGTGGCCGTGCTGGTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCa < 2:244545/236‑1 (MQ=255)
aTTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAggtg < 1:9064/239‑1 (MQ=255)
ttGCGGTGGCGGACAGGACGGTAACGTTGCCAGGCGGCACTTCAAGAATGCCGCCAGACAGGTAGATAAACTCCTCGTGCCCGTGGTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑GCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAggtgg < 2:778264/239‑1 (MQ=255)
tGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAggtggt < 1:429784/239‑1 (MQ=255)
tGCGGGTTCGGCCAGAACGGTCACGTGTCCAGGCTGCACTTCAAGAATTCCGCCAGACAGTAAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCCAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCTCCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAggtggt < 1:345776/239‑1 (MQ=255)
tgtCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGt < 1:373519/238‑1 (MQ=255)
gggcAGAACGGTCACGTTTCCAGGCTTCCCTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑Att < 1:1050353/235‑1 (MQ=255)
ggCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTg < 1:354015/239‑1 (MQ=255)
aacggtgtagttcgcgtgcggCAATTCAAGAATGCCGCAAGGCAGATAGGTAAACTCTTCGGTACCGTGCTGTTTCACGATGCGAATCATCCCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCata‑t < 2:846220/219‑1 (MQ=255)
cgggtccggTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCata‑t < 2:184549/230‑1 (MQ=255)
cGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCCAACCAGAGAAC‑ATTTGTTGCTCTCCGCTGACC‑ATGTCCCGGTGGGAAGGC‑ATTTCCCTA‑Tc > 1:996981/1‑238 (MQ=255)
cACGTTTCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCAccc < 1:52372/238‑1 (MQ=255)
ccAGGCTGCACTTCAAGAATGCCGCCAGGCATATAGATAAACTTTTCGTGACCGTGCTGCTTCACGATGCGAATCATACCAGGCTTAATGGC‑CGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTa < 1:1054600/239‑1 (MQ=255)
cgggCTGCCCTTCAAGAATGCCGCCAGACAGATAGAAAAACTCTTCGTGACCGGGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑TCCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTaa < 2:837772/237‑1 (MQ=255)
cgggCTGCACTTCAAGAATGCCCGCAGACAGATAGATAAACTCGTCGTGACCGTGCTGTTTCACGAGGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTaa < 2:510338/237‑1 (MQ=255)
ccggCTTCACTTCTCGAATACCGCCAAGCAGAAAGATAAACTCTTCGGGACCGTTCTGTGTCACGATGCGAATCATACCAGGCTTAATGGC‑TGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTGCCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCGCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTaa < 2:539996/237‑1 (MQ=255)
tGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGGGAGCAGCGGGGCGGGGCCAGGGGAGA‑TTCCCAGTTCCCCA‑TCGCTCACCCG‑TATCTGGTGTTTTTCGCCCAACCCCGAGAACAATTTGTT‑CTCTTCGGCGACG‑GCGGCCCCGTGGGAAGAA‑CTTGCCATA‑TTCCCCCCCGCTTatagggg > 2:900740/1‑233 (MQ=255)
gCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCACCCGGGCGGGGCCACGGTAGA‑TCCCCCGTTCACCT‑TCGCT‑ACCCGTTACCTGGCTTTTTTCGACCCGCCCACAGAAC‑ACTTTTTGCTCTTCGCTGTCG‑CGGTCCAGGTGGGAAGAC‑ATTTCCACA‑TCCCCCCCCCCTTAAgcggga > 2:375359/1‑234 (MQ=255)
cACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCCATTCACCT‑TCGCT‑AACCCTTACCTGGGTTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCCCTGACG‑ACCGCCAGGTGGGAAGGC‑AATGCCCTA‑TACCCCTCCCATTAAA‑GCGTTa > 1:122179/1‑239 (MQ=255)
aTGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCCCGATGCGAATCATACCAGGCTTAATGGA‑GGTGGGCAGCCGGGCCGGGCCAGGGAAGA‑CACCCCTATCACCTCTGGCC‑TCCGGTT‑CCCGGGTATTGTCGACCCAACCCACCAAA‑ACTTGTTGCGCTCCCCGGCCG‑CAGTCCAGGTGGGAAGCA‑CTTCCCCAA‑TAACCCTCCCCCTACG‑GGGTTAAAGTTTTTTg > 2:745652/1‑239 (MQ=255)
aTGCAGCCGGACAGATAGATTAACTCTTCGGGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAAGGGC‑GGTGAGCAGCGGGGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGGCCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGtttt < 2:223988/236‑1 (MQ=255)
ccgccAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCCGGGGAGA‑TCCCCCGTTCACCC‑TCGCT‑ACCCCGTAACCGGGTTTTCTCCACCAGACCAGAGAAC‑ATTTGTTGCTCTGGGCGTTCG‑CGCTCCCGGGGGGAAGGC‑ATTGCCCCA‑TAACCCCCCCCTTAAA‑GGGTTAAAATTTTTTgggt > 2:75944/1‑237 (MQ=255)
atagataAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGGGAGCAGCGGTGCGGGGCCAGGGTAAA‑TCCCCAGGTCACCT‑TCGCT‑ACCCCTTACCTGGGTTTTTTCGACCAGACCAAAGAAC‑CTTTTTTTCTCTGCGCGGACG‑GCGTCCAGGGGTGAAATC‑ATTTCCCAC‑TCAACCCCCCTTTAAGTGGGTTAAGATTTTTGTGT‑TTTTTc‑cca > 2:976474/1‑235 (MQ=255)
gataAACTCTTCGGGCCCGTGCTGGTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑Gcttc < 1:462155/239‑1 (MQ=255)
ataAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAgaga < 1:220245/139‑1 (MQ=255)
ataAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGGAGA‑TCCCCCGTTCACCC‑TCGCT‑ACCCGTTACCCGGATTTTCTCGACCAGACCCGGGAAC‑ATTTGTTGCTCTTCCCCGGCG‑GCGTCCAGGGGGTAAGAC‑CATGGCATA‑TCACCCCCCCCTTAAG‑GCGCTAAAATTTTTTGGG‑TTTTTC‑CACA‑Acttct > 2:582003/1‑239 (MQ=255)
taAACCCTTCGGGACCGGTGTGGTTCCCGATGGGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTTCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑Gcttc < 1:582003/237‑1 (MQ=255)
aaaCTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGGGCGGGGCCAGGGGAAA‑TACCCCGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTTTCGCCCAGACCAGAGAAC‑ATTTTTTTCCCTGCGCCGACA‑CCGTCCAGGTGGGAAGTCAATTACCAT‑‑TTACCCCCCCATTCAG‑GCGTTATAAAGTTTTGACTTTTTTC‑CACA‑Ccctctc > 2:477582/1‑238 (MQ=255)
aaCTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCg < 1:248120/239‑1 (MQ=255)
ttCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGGGCGTGGCCAGGGGAGA‑ACCCCAAGTCCCCT‑TCCGT‑AACCGTTACCCGGATTTTCTCGACCACACCAGAGAAC‑ATTTTTTTGCCTCGGCTCACGCACCACCCGG‑GGTAAAAC‑ATTGGCCTA‑TCACCCCCCCCCAAAG‑GAGGTTAAGTTTTTTTGG‑TTTTTC‑CCCC‑ACCTCTTCTATggg > 2:596751/1‑238 (MQ=255)
ttCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGAGAGCAGGGGCCCGTGGCCAAGGGAGA‑TCCCCAGTTCACCT‑TCGTC‑ACCCCCTACCCGGGATTTTTTGCACAGAACAAAGAAC‑CTTTTTTGCTTACCCCCGACG‑AGGACCCGGTGGTACGGA‑TTTCCAATATTCACCACCCGTTAACA‑GCG‑TAAAGTTTTTTCGG‑TTTTTC‑AACA‑CCttcctcctggta > 2:785271/1‑233 (MQ=255)
ttCGTGACCGGGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGa < 1:1088744/239‑1 (MQ=255)
tgcGTGACCGTGCTGTTTCACGATTCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGa < 1:705070/237‑1 (MQ=255)
ctggtgtgTGCTGTTTCACGAGGCGAATCATCCCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCCCCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCTCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAAc < 2:1033824/232‑1 (MQ=255)
cGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGGGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGGTACCTGGGTTTTTTCGACCCGACCCGAGAAC‑ATTTTTTGCTCTTCGCTGGCC‑GCCTCCCGGTGGTAAGTC‑ATTTCCCTA‑TCACCCCCCCCTTAAG‑GCGTTAAAGTTTTTTTGC‑TTTTTC‑CCAA‑CCTTCTTCGagtgga > 2:156887/1‑233 (MQ=255)
cGTTCTTTTTAACGATGCGAATCATACCCGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCa < 1:685986/239‑1 (MQ=255)
tGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGGGCAGCGGTGCGTGGCGCGGGGAAA‑TCCCCCGTTCACCT‑TCGCT‑ACCCGTTACCTGGGTTTTTTCCACCCCACCAGCAAAC‑ATTTGTTGCTCTGCGCTGACC‑ACGTCCATGGGGTTAGGG‑ATTCCCCAA‑TCACCCCCCGATACAG‑GCGTTAAAGTTTTTTTGC‑TTTTTC‑CAAA‑CCTTTTTCCATGGAAACCACAATg > 2:218551/1‑239 (MQ=255)
tGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGGGCAGCGGGGCGTGGCCAGGGGAAA‑TCCCCAGTTCACCT‑TCCCT‑ACCCGTTTCCTGGATTTTCTCGACCCGACCAGCAAAC‑CTTTTTTGCCCTGCCCTGACG‑CAGTCCCAGGGGGCAGGA‑ATTGCCACA‑TCACCCCCCCATCATG‑GCGTTTAAGTTTTTTGGG‑TTTTTC‑CACC‑ACttcttcatatgaaccgcacaaa > 2:439302/1‑223 (MQ=255)
tGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAc < 2:560819/123‑1 (MQ=255)
tGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGGGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTTTCGACCAGACCAGAGAAc > 1:560819/1‑123 (MQ=255)
tGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGGGCGTGGCCAGGGGAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGGTTTTCTCGACCAGACCAGAGAAC‑ATTTTTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGGC‑ATTGCCATA‑TCACCCTCCTCTTAAG‑GGGTTAAAGTTTTTTGGG‑TTTTTC‑CCCA‑ACTTCTTCGGTGGAACCGACCacg > 2:637240/1‑237 (MQ=255)
tGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGGGAGCAGAGGTGCGTGGCAAGGGGAGA‑TCCCCAGATATCCT‑TCCCT‑ACCCCTTACCCGGATTTTTTCCGCCAGACCCAAGACA‑ATTTGTTGCTCTGCGCTGGCG‑ACGTCCAGGTGGTAAAAG‑ATTGCCATA‑TCACCCCCCCCTTAGA‑TGGGTAAAGTTTTTTGGG‑TTTTTCACACA‑CCTTCTTGTATGGAAcacacaag > 2:1034966/1‑232 (MQ=255)
cTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGG‑GGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGGTTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGGAAGTC‑ATTGCCATA‑TCACCCTCCGGTTTAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑ACTTCTTCGATGGAACCGcccctttaa > 1:87936/1‑233 (MQ=255)
tGTTTCACGATGCCAATCAGTCCAGGCTTAATGGG‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑CCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAg < 2:355374/239‑1 (MQ=255)
cACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCCGCGGGGCGTGGCCCGGGGAAA‑TCCCCAGTTTACCT‑TCGCT‑CCCCGCTCACCGGGTTTTCTCGACCCCACCAGCGAAC‑ATTTGTTGCTCTCCGCTGGCC‑ACGTCCACGTGGTAAGTC‑CTTGCCACA‑TCACCCCCCGCTTAAG‑GGGTTAAAGTTTTTTGGT‑TTTTTC‑CACACACTTTTTCATTGGAACC‑ACCAttaaaaaac > 2:614385/1‑230 (MQ=255)
cGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCt < 1:637240/239‑1 (MQ=255)
atctttccgggCTTATTGGG‑GTTGGGCACCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTGCCTGGATTTTCTCGACCAGACCAGAGAAC‑TTTTGGTGCCCTGCCCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTACGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGc < 2:270966/230‑1 (MQ=255)
aTCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCgg < 1:16757/238‑1 (MQ=255)
aTCATACCAGGCTTAATGGC‑GGTGAGCAGCGGGGCGTGGCCAGGGTAGA‑TCCCCCGTTTCCCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCACACCAGAGAAC‑ATTTTTTGCCCTTCGCGTACG‑ACGTCCAGGTGGGAAGGC‑ATTGCCCAA‑TTAACCTCCCCTTTAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CCCA‑GCCTCTTCGTGTGAACCGAcccagtgaaaacccacgccccgg > 2:896229/1‑218 (MQ=255)
aCCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑TACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTg < 1:924465/239‑1 (MQ=255)
ccAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGa < 1:451662/239‑1 (MQ=255)
ccAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGa < 1:307573/239‑1 (MQ=255)
tAATGGC‑GGTTGGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCCCCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTAt < 1:802049/238‑1 (MQ=255)
aaTGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGGAGA‑TCCCCAGTTCCCCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGCTTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCACGGTATCGTAtt > 1:191766/1‑238 (MQ=255)
ggC‑GGTGAGCGGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGcc < 1:823806/239‑1 (MQ=255)
agcGGTTCGGTGCCAGGGTAGC‑ACCCCAGTTCGCTG‑TCGGT‑TCCCGTTACCTGGATTTTCTCGACCAGGCCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCatgat < 1:1035238/238‑1 (MQ=255)
agcGGTGCGGGGCTAGGGTAGA‑TCCCCAGTTCAACT‑TCGCT‑CCCCGTTACCGTGATTTTCACGACCAGACCAGAGAAC‑ATTTGTTGACCTGCGGTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCCCCCTTCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCatgat < 1:745652/238‑1 (MQ=255)
agcGGGTCGTGGCCAGGGTAAG‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCatgat < 1:75944/238‑1 (MQ=255)
cGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGGGATCGTATTCGCCTTCCatgatg > 1:134338/1‑237 (MQ=255)
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ACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCTTCCATGGCTCGCGCTTCGTCGAGATCCTGGCCGCGAATTGCGGTGTCGGCCAGAACGGTCACGTTGCCAGGCTGCACTTCAAGAATGCCGCCAGACAGATAGATAAACTCTTCGTGACCGTGCTGTTTCACGATGCGAATCATACCAGGCTTAATGGC‑GGTGAGCAGCGGTGCGTGGCCAGGGTAGA‑TCCCCAGTTCACCT‑TCGCT‑ACCCGTTACCTGGATTTTCTCGACCAGACCAGAGAAC‑ATTTGTTGCTCTGCGCTGACG‑ACGTCCAGGTGGTAAGTC‑ATTGCCATA‑TCACCCTCCGATTAAG‑GCGTTAAAGTTTTTTGGC‑TTTTTC‑CACA‑GCTTCTTCGATGGAACCGACCATGTAGAACGCCTGCTCCGGCAGGTGATCGTATTCGCCTTCCATGATG > NC_000913/3915617‑3916085
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
