Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,368,876 |
A→G |
12.9% |
E71G (GAG→GGG) |
fxsA → |
suppressor of F exclusion of phage T7 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,368,876 | 0 | A | G | 12.9%
| 153.2
/ 2.5
| 81 | E71G (GAG→GGG) | fxsA | suppressor of F exclusion of phage T7 |
| Reads supporting (aligned to +/- strand): ref base A (27/40); new base G (10/2); total (38/43) |
| Fisher's exact test for biased strand distribution p-value = 9.90e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCT > NC_000913/4368639‑4369113
|
cccgggttttttttcagggaaaaCCTTTGGGTTGGTTTCCTTTTATTTCCATTTTCCTTTATGGCTATATTGAGATTGCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGgag < 2:539129/219‑1 (MQ=255)
acggggtgctTTTGCAGGGAAAACCTTGGGTCTTGTTCACTTTTATTGCCATTTTCCTTTATGGCTAAAATGAGATTTCAAGCTTTATGCAGGTTGCCCGGGTATTGGGGGTATTGCTGACCCTCGGGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATGTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGgag < 2:71559/233‑1 (MQ=255)
aCCGGCTGTTTTTACAGGAAAAACCTTTGCGCTTGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGgag < 2:128114/239‑1 (MQ=255)
aCCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGgag < 1:107841/239‑1 (MQ=255)
aCCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGgag < 1:664877/239‑1 (MQ=255)
ctgctATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCCACGGCGGAgatgat > 1:927414/1‑239 (MQ=255)
gaaacccTTTTCTCTGTTTATCTTTTTTTGCCATTTGCCTTTATGGTTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑tt < 2:250599/231‑1 (MQ=255)
agaAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCTGCGGGTGTAAACCCACCGGCGGAGATGATTAAAAAG‑G‑tttt > 1:139897/1‑237 (MQ=255)
gaAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCCCTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAGCGGCGGAGATGATTTAAAGG‑G‑tttt > 1:1083201/1‑236 (MQ=255)
aaCCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGCGGCGGGGGTGGTTAAAAGG‑G‑GTTCGCTg > 1:175878/1‑239 (MQ=255)
tGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCCGCGGCGGAGATGATTAAAAGG‑G‑TTTCCCTGATCAtt > 1:1038391/1‑239 (MQ=255)
gTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGACAACCCAGCGGCGGAGATGGTTTAAAGA‑G‑GTTTGCTGCTCActgct‑gcgt > 1:548389/1‑236 (MQ=255)
gTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGCGGCGGGGATGATTAAAAGT‑G‑TTTCGCTGATCATTgtgtgtt > 1:956169/1‑233 (MQ=255)
ttttttttttTGCCTTTTTTCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTtg < 2:927414/235‑1 (MQ=255)
ttctttttATGGACATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTTTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTtg < 1:228827/235‑1 (MQ=255)
tccTTTGAGTGCCATTTTCCTTTATGGTGATATTGAGATTTCAATCTTTAGTCAGGTTGCCCATGGATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTtgc < 1:822031/238‑1 (MQ=255)
cTTTTTTTTCCTTTTTTCTTTATGTTTATATTGAGATTTCAATTTTTATTCAGGTTGCCCCTGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTtgc‑t‑g < 2:899163/239‑1 (MQ=255)
aTTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCCTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCCGCGGCGGGGATGATTAAAAAA‑G‑TTTCTCTGGTCATTTCT‑GGGTtgtggggttt > 2:55601/1‑231 (MQ=255)
ttATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCACCGGCGGGGGTGATTTAAAGT‑G‑GTTCGCTGTTAATTGCT‑GGTTTGC‑T‑GGGTTTTTTACC‑GGGC‑tttt > 1:690619/1‑239 (MQ=255)
ttATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAACGGCGGCGTTGATTAAACAT‑G‑TTTTACTGATCATTGGT‑TGGTTTC‑T‑ACTTTTTTTTCC‑GCGC‑tttt > 1:946790/1‑239 (MQ=255)
tGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAAACCAGCGGCGGAGGTTGTTAAAAAA‑GTTTTCGC‑GAGCATTTTC‑GGTTTTG‑T‑GCTTTTTTTAAC‑GAGG‑gttttt > 2:653421/1‑238 (MQ=255)
tataTTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAAACCAGCGGCGGGGGGTGTTAAAAAT‑G‑TTTCGCTGGTAATTTCTGGGTTTGG‑T‑CCTTTT‑TTACA‑GGGA‑ttttttttacc > 2:836124/1‑234 (MQ=255)
atatTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCGAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGAATGGTTAAAAGT‑G‑TTTCGCGCTTAATTGGC‑GGTTTTCGT‑CCTTTTTTTCCC‑GGGT‑ttttttccg > 1:82287/1‑234 (MQ=255)
ttgttttatattttttttCAGTTTGCCCATTTATTGGGGGTTTTTCTGACCCTCGAGCTGGTTTTATTCACGTCCGTTATCGGTATGTCACTGGTAAGTAACCAGGGCTTTAAGAATTTCGGGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt < 2:506195/227‑1 (MQ=255)
gcgaTTTCAATTTTTTTTCAGGTTGGCCATGTATTGGGGGTTTTGCTGACCCCCGGTGAGGTTATATTCACGGCAGTTAGCGGTATGTCACGGGTACGTAACCGTGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCTGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTTC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt < 2:817446/237‑1 (MQ=255)
agaTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTCAAAGG‑G‑TTTCGCTGGTCCTTGCT‑GGGTTGC‑T‑GCTTTTATTTCC‑GGGC‑TTTTTTTAC‑GACTTCCTc > 1:121873/1‑239 (MQ=255)
agaTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGCCGGCGGGGGAAAACCCAGCGGCGGGGGTGGATTAAAGG‑G‑TTTGCCTGGGCAATTGT‑GGGTTGC‑T‑CGTTTTATTTAC‑GAGC‑ttttttttcggcattctc > 2:358057/1‑227 (MQ=255)
gtttAAATTTTTAATCAGGTTGGTCATGTAGTGGGGGTATTGGTGACCCTCGTGCAGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATGTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCg < 1:407709/237‑1 (MQ=255)
aTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTTAAAGA‑G‑TTTTCCTGGTCATTTCT‑GGGTTGC‑T‑GCTTTTATTAAC‑TGGG‑TTTTTTACC‑GGCTTCCTCgg > 1:573748/1‑239 (MQ=255)
tttCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGGGGGTTTAAAAAA‑G‑GTTTTCTGGACATTGTT‑GGGTTTG‑T‑TCTTTTTTTACC‑GGGG‑ttttttttcaccttcccccgg > 2:631343/1‑224 (MQ=255)
ggTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAGCGGCGGAGAAGGTTTAAAAG‑G‑TTTTGCTGGATGTTTCT‑TGTTTTT‑T‑GCTTTTTTTTCCGGGGG‑TTTTTTCCC‑GCCTCTCCCGGTTTTCtttttttttt > 2:356976/1‑238 (MQ=255)
tGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTgccgc < 1:712138/239‑1 (MQ=255)
gCCCATTGATTGGGGGTTTTGCTGACCCTCGGGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTgccgc < 1:584382/238‑1 (MQ=255)
gTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAACGGCGGAGATGGTTAAAAGG‑G‑GTTCGCTGGTCATTGCT‑GGTTTGC‑T‑GGTTTTATTACC‑GGGC‑TTTTTTACC‑GAATTCCTCGGGCTTTTAATTTTATTTCCGCCCGTGCa > 1:950581/1‑239 (MQ=255)
tATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTtgc‑t < 1:319303/175‑1 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTGAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAGA‑G‑GTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCCTTTTTTACC‑GGGC‑TTTTTTTCC‑CACTTACTCCGGCTTTCACTTTTTTTGCCCCCGGGGGaaaaaaaaacaa > 2:415928/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAAT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTTCCGCCGGTGCAAAAACa > 1:857576/1‑234 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAACCCAGCGGCGGGGGTGATTTAAAAG‑G‑TTTCGCTGGTCTATGCT‑TGGTTGC‑T‑GCCTTTTTTACC‑CGGG‑GTTTTTTTC‑GCCTTTCTCGGGTTTTTTCTTTTTTTTTCCCCCGGGCaaaaaaaactta > 2:374491/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAACGGCGGAGATGATTAAAAATGG‑TTTCCCT‑ATTACTGCC‑GGTTTGT‑T‑GCTTTTTTTACC‑GGGCGTTTTTTCCC‑GCTTTCCCCGTTTTTCT‑CTTTTTTTTCCCTCCGTGGAAAAACATCTgc > 2:585509/1‑238 (MQ=255)
tttcTGTCCCTCGTGCTGGTTTTATTCACGTGAGTTTCCGGTATGTCACTGGTACGGAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑Ac < 2:225421/236‑1 (MQ=255)
tgtttcccctgtggCTGTTTTTATTCCCGTTAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACa < 2:573748/226‑1 (MQ=255)
tGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAAACCAACGGGGGGAGTGATTAAAAAG‑G‑GTTTGCTGGTCATTTGT‑GGTTTTC‑TCGTTTTTTTTCCC‑GGGT‑TTTTTTACC‑GCCTCCCCCGG‑CTTTTTCTTTTTTTGCCCCCCGGGAaaaaaaacccgcaa > 2:876656/1‑229 (MQ=255)
ccTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGtcttc < 1:571302/197‑1 (MQ=255)
gTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAAT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACCTCCTCGGGCTTCTACTTTTATTTCCGCCGGTGCAAAAACATCTG‑GCAGTG‑GAGGTGATTCCg > 1:89972/1‑237 (MQ=255)
ttttcccggttgtttttggTTTGTCACTGGTACTTAACCAGGGGTTTAAGAATTTCGGGCTGATGCAGTAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTg < 2:496011/222‑1 (MQ=255)
ttCCCGTCATTTATCGGTATGTCACTGGTACGGAACCTGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAAGGGCGGCGGGTGAAAACCCAGGGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 2:1005252/239‑1 (MQ=255)
gacaggcAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATGTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 1:243733/232‑1 (MQ=255)
cACTTCAGTTATCGGTATGTCACTGGTACGTAACCGGGGCTTTAAGAATTTCGTGCTGATGCAGCCAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTGCC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 1:158367/237‑1 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAGG‑G‑TTTCGCTGATCATTTCT‑GGGTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTTTACTTTTTTTTCCGCCGGTGCAAAAGACTCTT‑ACCGTG‑AAGttttgtcccccttttggcttt > 1:115720/1‑220 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt < 2:834789/169‑1 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt > 1:834789/1‑169 (MQ=255)
cGTCAGTTAGCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCttt < 1:374491/239‑1 (MQ=255)
gTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCCCATTTTCGCtttt > 1:397494/1‑239 (MQ=255)
gTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGAGGCGGAGATGATTAAAAAG‑G‑TTTGGCCGGTCATTGCT‑GGTTTGC‑T‑GCCTTTATTACC‑CGGC‑TTTTTTACCTGCCTCCCCCGGT‑TTCTACATTTTTTTACGCCCGTGCAAAAACCTCTGTACTG‑G‑AAGTTGATGCCCGATTTTCGCtttt > 2:124030/1‑239 (MQ=255)
aGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACCGTG‑AAGTTGATGCCGCCTTTTCGCtttttt > 1:360739/1‑236 (MQ=255)
cACTGTTACGTAACCGGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcgg < 1:653421/238‑1 (MQ=255)
cACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc < 1:867587/239‑1 (MQ=255)
aCTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCCTTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑CACTTCCTCCGGCTTCTACTTTTTTTTCCGCCGGGGCAAAAACATCTG‑ACCGTGCAAGTT‑ATCCCCCATTTTTGCCTTTCTCTCCAGCCTGggggc‑g > 2:867587/1‑239 (MQ=255)
gTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTTCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTTATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGttt > 1:875630/1‑239 (MQ=255)
aaCCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCg > 1:916290/1‑87 (MQ=255)
aaCCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCg < 2:916290/87‑1 (MQ=255)
ccAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑TCAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCCTGCCTGGCGGC‑GGGTTTAGCGCCg > 1:460613/1‑239 (MQ=255)
aGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTTCTTTTATTTCCGCCGGTGCAAAAACATCTG‑ACAGGG‑AAGTTTATTCCCCATTTGCGCTTTTTTTCCCTGCCTGGCCGC‑GGTTTTTGTGCCggg > 1:986935/1‑239 (MQ=255)
ggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGGTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGGGCCAAAGCCTCTG‑ACAGTG‑AAGTTGATGCCGCATTTTCGCTTTTCTCCCATGCCCGGCGGC‑GGTTTTAGAGCCcggg > 1:214990/1‑237 (MQ=255)
ttAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGGCGCCGGTGCCAAAGCATCTG‑ACAGGG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGGTTTTAGGCCCgggccggg > 1:961343/1‑234 (MQ=255)
ttAAGAATTTCGGTCTTATGCAGCAAAAAATGGCGGCGGGTTAAACCCCCGCGGGGGAGATGATTAAAAGT‑T‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGt < 2:857576/239‑1 (MQ=255)
ttAAAAATTTCGGGGTGGTGGAGAAAAAAATGGGGGGGGGTGAAAACCCAGGGGCGGAGATGGTTAAAAGT‑G‑TTTGGCTGATCATTGCT‑GGTTTGC‑T‑TCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGt < 2:697582/239‑1 (MQ=255)
aaGAATTTCGTGCTGATGCAACAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTgg < 1:884267/239‑1 (MQ=255)
tttCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGG‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTTCC‑GACTTCCCCGGGCTTCTACTTTTATTGCCGCCGGGGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTTCGCTTTTCTCGCATGCCTGGCGGC‑GGGTTTATGGCCGGGGCCggggggggga > 1:12919/1‑237 (MQ=255)
gTGCTGATGCAACAAAAAATGGCGGCGGGTGAAAACCCAGGGGGGGGGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATAc < 2:1038391/239‑1 (MQ=255)
tgtggagcaAAAAATGGGGGGGGGTGAAAACCCAGGGGCGGAAATGATTAAAAGT‑T‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTg < 2:950581/234‑1 (MQ=255)
ggggcagcaAAAAGTGGCGGGGGTTGAAAACCCGGCGGCGGAGATGATTAAAAGT‑G‑TTTCGTTGTTATTTGCT‑GGTTTGC‑T‑TCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTg < 2:946790/236‑1 (MQ=255)
gaggagaaaaaaaTGGGGGGGGGTGAAAACCCGGCGGCGGAGATTATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGTTGGCGGTAATACTTTTg < 2:175878/231‑1 (MQ=255)
aTGCCGGAAAAAATGGCGGCGGGTGAAATCCCGGCGGGGGGGATGATTAAAAGT‑G‑TTTCGCTTATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTCCTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGa < 2:177712/239‑1 (MQ=255)
agcagcaAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGa < 1:585509/237‑1 (MQ=255)
aaaaaaTGGGGGGGGGTGAAAACCCAGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTTATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAg < 2:89972/239‑1 (MQ=255)
aaaaaaTGGCGGCGGGTGAAAACCCAGTGGCGGATATGATTAAAAGT‑T‑TTTCGCTGATCATTTCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGa < 1:358057/238‑1 (MQ=255)
aaaTGGCGGCGGGTGAAAACCCAGCGGGGGATATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTAc < 1:474854/239‑1 (MQ=255)
aggaagggTGAAAACCCAGCGGCGGAAATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCg < 1:58712/234‑1 (MQ=255)
gggcggGTGAAAACCCAGGGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCGCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCg < 1:570542/237‑1 (MQ=255)
cggcggGTGAAACCCCAGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GTTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCg < 1:481358/238‑1 (MQ=255)
cggcggGTGAAAACCCGGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCg < 2:139897/238‑1 (MQ=255)
cggcggGTGAAAACCCAGGGGCGGTGATGATTAAAAGT‑T‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCg < 1:356976/238‑1 (MQ=255)
gcggGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGaa < 1:55601/238‑1 (MQ=255)
ggtgcggAAATGATTAAAAGT‑G‑TTTCGCTGATCATTTCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GATTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:736605/236‑1 (MQ=255)
gcggggGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:631343/239‑1 (MQ=255)
gagaTGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGGGGGCGGAAAACTTTTTATGGTGAGTACCAGCGAAAGGATGGTGAggcgggccgcct > 1:647410/1‑228 (MQ=255)
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ACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCT > NC_000913/4368639‑4369113
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
