Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,368,931 |
C→T |
14.1% |
G89G (GGC→GGT) |
fxsA → |
suppressor of F exclusion of phage T7 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,368,931 | 0 | C | T | 14.1%
| 175.1
/ 3.8
| 94 | G89G (GGC→GGT) | fxsA | suppressor of F exclusion of phage T7 |
| Reads supporting (aligned to +/- strand): ref base C (30/46); new base T (2/10); total (38/56) |
| Fisher's exact test for biased strand distribution p-value = 1.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGT > NC_000913/4368697‑4369162
|
ttATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCACCGGCGGGGGTGATTTAAAGT‑G‑GTTCGCTGTTAATTGCT‑GGTTTGC‑T‑GGGTTTTTTACC‑GGGC‑tttt > 1:690619/1‑239 (MQ=255)
ttATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAACGGCGGCGTTGATTAAACAT‑G‑TTTTACTGATCATTGGT‑TGGTTTC‑T‑ACTTTTTTTTCC‑GCGC‑tttt > 1:946790/1‑239 (MQ=255)
tGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAAACCAGCGGCGGAGGTTGTTAAAAAA‑GTTTTCGC‑GAGCATTTTC‑GGTTTTG‑T‑GCTTTTTTTAAC‑GAGG‑gttttt > 2:653421/1‑238 (MQ=255)
tataTTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAAACCAGCGGCGGGGGGTGTTAAAAAT‑G‑TTTCGCTGGTAATTTCTGGGTTTGG‑T‑CCTTTT‑TTACA‑GGGA‑ttttttttacc > 2:836124/1‑234 (MQ=255)
atatTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCGAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGAATGGTTAAAAGT‑G‑TTTCGCGCTTAATTGGC‑GGTTTTCGT‑CCTTTTTTTCCC‑GGGT‑ttttttccg > 1:82287/1‑234 (MQ=255)
ttgttttatattttttttCAGTTTGCCCATTTATTGGGGGTTTTTCTGACCCTCGAGCTGGTTTTATTCACGTCCGTTATCGGTATGTCACTGGTAAGTAACCAGGGCTTTAAGAATTTCGGGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt < 2:506195/227‑1 (MQ=255)
gcgaTTTCAATTTTTTTTCAGGTTGGCCATGTATTGGGGGTTTTGCTGACCCCCGGTGAGGTTATATTCACGGCAGTTAGCGGTATGTCACGGGTACGTAACCGTGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCTGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTTC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt < 2:817446/237‑1 (MQ=255)
agaTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTCAAAGG‑G‑TTTCGCTGGTCCTTGCT‑GGGTTGC‑T‑GCTTTTATTTCC‑GGGC‑TTTTTTTAC‑GACTTCCTc > 1:121873/1‑239 (MQ=255)
agaTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGCCGGCGGGGGAAAACCCAGCGGCGGGGGTGGATTAAAGG‑G‑TTTGCCTGGGCAATTGT‑GGGTTGC‑T‑CGTTTTATTTAC‑GAGC‑ttttttttcggcattctc > 2:358057/1‑227 (MQ=255)
gtttAAATTTTTAATCAGGTTGGTCATGTAGTGGGGGTATTGGTGACCCTCGTGCAGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATGTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCg < 1:407709/237‑1 (MQ=255)
aTTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTTAAAGA‑G‑TTTTCCTGGTCATTTCT‑GGGTTGC‑T‑GCTTTTATTAAC‑TGGG‑TTTTTTACC‑GGCTTCCTCgg > 1:573748/1‑239 (MQ=255)
tttCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGGGGGGTTTAAAAAA‑G‑GTTTTCTGGACATTGTT‑GGGTTTG‑T‑TCTTTTTTTACC‑GGGG‑ttttttttcaccttcccccgg > 2:631343/1‑224 (MQ=255)
ggTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAGCGGCGGAGAAGGTTTAAAAG‑G‑TTTTGCTGGATGTTTCT‑TGTTTTT‑T‑GCTTTTTTTTCCGGGGG‑TTTTTTCCC‑GCCTCTCCCGGTTTTCtttttttttt > 2:356976/1‑238 (MQ=255)
tGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTgccgc < 1:712138/239‑1 (MQ=255)
gCCCATTGATTGGGGGTTTTGCTGACCCTCGGGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTgccgc < 1:584382/238‑1 (MQ=255)
gTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAACGGCGGAGATGGTTAAAAGG‑G‑GTTCGCTGGTCATTGCT‑GGTTTGC‑T‑GGTTTTATTACC‑GGGC‑TTTTTTACC‑GAATTCCTCGGGCTTTTAATTTTATTTCCGCCCGTGCa > 1:950581/1‑239 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTGAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAGA‑G‑GTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCCTTTTTTACC‑GGGC‑TTTTTTTCC‑CACTTACTCCGGCTTTCACTTTTTTTGCCCCCGGGGGaaaaaaaaacaa > 2:415928/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAAT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTTCCGCCGGTGCAAAAACa > 1:857576/1‑234 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAACCCAGCGGCGGGGGTGATTTAAAAG‑G‑TTTCGCTGGTCTATGCT‑TGGTTGC‑T‑GCCTTTTTTACC‑CGGG‑GTTTTTTTC‑GCCTTTCTCGGGTTTTTTCTTTTTTTTTCCCCCGGGCaaaaaaaactta > 2:374491/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAACGGCGGAGATGATTAAAAATGG‑TTTCCCT‑ATTACTGCC‑GGTTTGT‑T‑GCTTTTTTTACC‑GGGCGTTTTTTCCC‑GCTTTCCCCGTTTTTCT‑CTTTTTTTTCCCTCCGTGGAAAAACATCTgc > 2:585509/1‑238 (MQ=255)
tttcTGTCCCTCGTGCTGGTTTTATTCACGTGAGTTTCCGGTATGTCACTGGTACGGAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑Ac < 2:225421/236‑1 (MQ=255)
tgtttcccctgtggCTGTTTTTATTCCCGTTAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACa < 2:573748/226‑1 (MQ=255)
tGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAAACCAACGGGGGGAGTGATTAAAAAG‑G‑GTTTGCTGGTCATTTGT‑GGTTTTC‑TCGTTTTTTTTCCC‑GGGT‑TTTTTTACC‑GCCTCCCCCGG‑CTTTTTCTTTTTTTGCCCCCCGGGAaaaaaaacccgcaa > 2:876656/1‑229 (MQ=255)
ccTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGtcttc < 1:571302/197‑1 (MQ=255)
gTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAAT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACCTCCTCGGGCTTCTACTTTTATTTCCGCCGGTGCAAAAACATCTG‑GCAGTG‑GAGGTGATTCCg > 1:89972/1‑237 (MQ=255)
ttttcccggttgtttttggTTTGTCACTGGTACTTAACCAGGGGTTTAAGAATTTCGGGCTGATGCAGTAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTg < 2:496011/222‑1 (MQ=255)
ttCCCGTCATTTATCGGTATGTCACTGGTACGGAACCTGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAAGGGCGGCGGGTGAAAACCCAGGGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 2:1005252/239‑1 (MQ=255)
gacaggcAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATGTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 1:243733/232‑1 (MQ=255)
cACTTCAGTTATCGGTATGTCACTGGTACGTAACCGGGGCTTTAAGAATTTCGTGCTGATGCAGCCAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTGCC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 1:158367/237‑1 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAGG‑G‑TTTCGCTGATCATTTCT‑GGGTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTTTACTTTTTTTTCCGCCGGTGCAAAAGACTCTT‑ACCGTG‑AAGttttgtcccccttttggcttt > 1:115720/1‑220 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt < 2:834789/169‑1 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCt > 1:834789/1‑169 (MQ=255)
cGTCAGTTAGCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCttt < 1:374491/239‑1 (MQ=255)
gTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCCCATTTTCGCtttt > 1:397494/1‑239 (MQ=255)
gTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGAGGCGGAGATGATTAAAAAG‑G‑TTTGGCCGGTCATTGCT‑GGTTTGC‑T‑GCCTTTATTACC‑CGGC‑TTTTTTACCTGCCTCCCCCGGT‑TTCTACATTTTTTTACGCCCGTGCAAAAACCTCTGTACTG‑G‑AAGTTGATGCCCGATTTTCGCtttt > 2:124030/1‑239 (MQ=255)
aGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACCGTG‑AAGTTGATGCCGCCTTTTCGCtttttt > 1:360739/1‑236 (MQ=255)
cACTGTTACGTAACCGGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcgg < 1:653421/238‑1 (MQ=255)
cACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc < 1:867587/239‑1 (MQ=255)
aCTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCCTTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑CACTTCCTCCGGCTTCTACTTTTTTTTCCGCCGGGGCAAAAACATCTG‑ACCGTGCAAGTT‑ATCCCCCATTTTTGCCTTTCTCTCCAGCCTGggggc‑g > 2:867587/1‑239 (MQ=255)
gTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTTCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTTATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGttt > 1:875630/1‑239 (MQ=255)
ccAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑TCAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCCTGCCTGGCGGC‑GGGTTTAGCGCCg > 1:460613/1‑239 (MQ=255)
aGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTTCTTTTATTTCCGCCGGTGCAAAAACATCTG‑ACAGGG‑AAGTTTATTCCCCATTTGCGCTTTTTTTCCCTGCCTGGCCGC‑GGTTTTTGTGCCggg > 1:986935/1‑239 (MQ=255)
ggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGGTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGGGCCAAAGCCTCTG‑ACAGTG‑AAGTTGATGCCGCATTTTCGCTTTTCTCCCATGCCCGGCGGC‑GGTTTTAGAGCCcggg > 1:214990/1‑237 (MQ=255)
ttAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGGCGCCGGTGCCAAAGCATCTG‑ACAGGG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGGTTTTAGGCCCgggccggg > 1:961343/1‑234 (MQ=255)
ttAAGAATTTCGGTCTTATGCAGCAAAAAATGGCGGCGGGTTAAACCCCCGCGGGGGAGATGATTAAAAGT‑T‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGt < 2:857576/239‑1 (MQ=255)
ttAAAAATTTCGGGGTGGTGGAGAAAAAAATGGGGGGGGGTGAAAACCCAGGGGCGGAGATGGTTAAAAGT‑G‑TTTGGCTGATCATTGCT‑GGTTTGC‑T‑TCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGt < 2:697582/239‑1 (MQ=255)
aaGAATTTCGTGCTGATGCAACAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTgg < 1:884267/239‑1 (MQ=255)
tttCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGG‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTTCC‑GACTTCCCCGGGCTTCTACTTTTATTGCCGCCGGGGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTTCGCTTTTCTCGCATGCCTGGCGGC‑GGGTTTATGGCCGGGGCCggggggggga > 1:12919/1‑237 (MQ=255)
gTGCTGATGCAACAAAAAATGGCGGCGGGTGAAAACCCAGGGGGGGGGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATAc < 2:1038391/239‑1 (MQ=255)
tgtggagcaAAAAATGGGGGGGGGTGAAAACCCAGGGGCGGAAATGATTAAAAGT‑T‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑g < 2:950581/234‑1 (MQ=255)
ggggcagcaAAAAGTGGCGGGGGTTGAAAACCCGGCGGCGGAGATGATTAAAAGT‑G‑TTTCGTTGTTATTTGCT‑GGTTTGC‑T‑TCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑g < 2:946790/236‑1 (MQ=255)
gaggagaaaaaaaTGGGGGGGGGTGAAAACCCGGCGGCGGAGATTATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGTTGGCGGTAATACTTTT‑g < 2:175878/231‑1 (MQ=255)
aTGCCGGAAAAAATGGCGGCGGGTGAAATCCCGGCGGGGGGGATGATTAAAAGT‑G‑TTTCGCTTATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTCCTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga < 2:177712/239‑1 (MQ=255)
agcagcaAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga < 1:585509/237‑1 (MQ=255)
aaaaaaTGGGGGGGGGTGAAAACCCAGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTTATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAg < 2:89972/239‑1 (MQ=255)
aaaaaaTGGCGGCGGGTGAAAACCCAGTGGCGGATATGATTAAAAGT‑T‑TTTCGCTGATCATTTCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGa < 1:358057/238‑1 (MQ=255)
aaaTGGCGGCGGGTGAAAACCCAGCGGGGGATATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTAc < 1:474854/239‑1 (MQ=255)
aggaagggTGAAAACCCAGCGGCGGAAATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:58712/234‑1 (MQ=255)
gggcggGTGAAAACCCAGGGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCGCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:570542/237‑1 (MQ=255)
cggcggGTGAAACCCCAGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GTTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:481358/238‑1 (MQ=255)
cggcggGTGAAAACCCGGCGGGGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 2:139897/238‑1 (MQ=255)
cggcggGTGAAAACCCAGGGGCGGTGATGATTAAAAGT‑T‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:356976/238‑1 (MQ=255)
gcggGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGaa < 1:55601/238‑1 (MQ=255)
tgggtggtgttttttAAAAGT‑T‑TTTCGCGTGTTATTGCT‑GTTTTGC‑T‑GGTTTTATTCCC‑GGTT‑TTTTTTACC‑GACTTCCATGGTTGTTTCCTTTTATTGCCGCCGGTGCAAAATCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 2:121873/226‑1 (MQ=255)
ggtgcggAAATGATTAAAAGT‑G‑TTTCGCTGATCATTTCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GATTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:736605/236‑1 (MQ=255)
gcggggGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:631343/239‑1 (MQ=255)
gagaTGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGGGGGCGGAAAACTTTT‑TATGGTGAGTACCAGCGAAAGGATGGTGAggcgggccgcct > 1:647410/1‑228 (MQ=255)
gtatgatTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATGCTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCt < 1:187267/236‑1 (MQ=255)
gttgtttAAAATT‑T‑TTTCGCTTCTCTTTGCT‑GTTTTGT‑T‑GTTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTTTTCTACTTTTATGGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCtt < 2:360739/233‑1 (MQ=255)
atgatTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTATTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTg < 1:602176/238‑1 (MQ=255)
atTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc > 2:595198/1‑156 (MQ=255)
atTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc < 1:595198/156‑1 (MQ=255)
aaaatgttttCCCTGATCAGTTCT‑GGTTTTC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCGCGGTCTTTTACTTTGATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATaa < 1:359225/232‑1 (MQ=255)
gt‑g‑tTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTATCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGGGAAAGGATGATGAGGGCGGCCGCCTTGATCTTAAAGAc > 1:658889/1‑239 (MQ=255)
gcttgtCATTGTT‑GGTTGGC‑T‑GCTTTTATTACC‑GGGT‑TTTTTTACC‑GATTTCCTCGGTTTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 1:1057855/234‑1 (MQ=255)
tctttttttttgtgttttGT‑T‑GTTTTTTTTCCC‑GGGT‑TTTTTTCCC‑TATTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 2:12919/224‑1 (MQ=255)
tctgctcttgtttgttttGC‑T‑GTTTTTATTCCC‑GGGT‑TTTTTTCCC‑GCCTTCCTCGGTTTTCTACTTTTATTGCCGCGGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGTTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 2:986935/224‑1 (MQ=255)
tGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga < 2:913792/171‑1 (MQ=255)
tGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga > 1:913792/1‑171 (MQ=255)
gTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTTATCCTAAAAACGATCGCCAGGGTTAAttgcga > 1:935287/1‑234 (MQ=255)
gTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGa > 1:370048/1‑239 (MQ=255)
gTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGGCATACTTTTGGTTGGTG‑GGACCAGCGAAAGGATGATGAGGGCGACCGCCTTGATCATAAAAAAGATCGGCAGGGGTAATGTGGa > 2:497307/1‑239 (MQ=255)
tttttgttttttttttttCC‑GGGT‑TTTTTTACC‑GGTTTTCCCGTTTTTTTTCTTTTATTGCCGCCGGTTCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATCCTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCg < 2:397494/229‑1 (MQ=255)
tttGC‑T‑GTTTTTTTTACC‑GGGT‑TTTTTTACC‑TACTTCCTGGGGTTTTTCTTTTTATTGCCGCCGGTGCAAAAGCTTGTG‑ACAGGG‑AAGTTGATGCCGCATTGGCGCTTTTCGCGCATGCCTGGCGGC‑GGTTGTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaa < 2:1083201/239‑1 (MQ=255)
gtttttttttttttATTCCC‑GGGT‑TTTTTTCCC‑GACTCTCTGGTTCTTCTCCTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGGGCTTTTCTCGCATGCCGGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCg < 2:460613/229‑1 (MQ=255)
tgc‑t‑gcTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAGGCATCTG‑GCAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCTTGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAAc < 1:124030/239‑1 (MQ=255)
ttttttttttttTCCC‑GGGT‑TTTTTTACC‑GGTTTCCTGGGTTTTTTTTTTTTTTTGCCGCTGGTGCAAAAGCATCTG‑ACAGGG‑AAGTTGATGCCGGATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAAc < 2:214990/233‑1 (MQ=255)
c‑t‑gctTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCTGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑TCTGGTGAGAACCGGCTCAAGGAGGCGGAGCGCGACCGCCTTGAGTCTAAAAGTGACCGCCAGGATTAAGGtttgaacc > 2:1058586/1‑231 (MQ=255)
tgtttttttttTCCG‑GGGT‑TTTTTTACC‑GTTTTCCCGGGTCTTTTGTTTTTATGGCCGCCGTTTCAAAAGCATCTG‑ACAGTG‑AAGTTGAGGCCGCATTTGCGCTTTGCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATTCTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACg < 2:608633/234‑1 (MQ=255)
gttttttttATTACC‑GGGC‑TTTTTTAAC‑GAGTTTCGCGGTCTTTTATTTTTATTGCCGCCGGTGGAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACg < 1:415928/234‑1 (MQ=255)
gtttttATTACC‑GGTC‑TTTTTTACC‑AACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGGGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCg < 1:836124/237‑1 (MQ=255)
ttttttTCCC‑GGTT‑TTTTTTCCC‑GTTTTCCTCGGTTTTCTACTTTTATTGCCGCCGGTGCAAAGGCATTGG‑ACGGGG‑AAGTTGAGGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGa < 2:1049951/239‑1 (MQ=255)
taCC‑GGGC‑TTTTTTACG‑GCATTCCTCGGTTCTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGTAACGCCGGATTAtgt < 1:30769/239‑1 (MQ=255)
taCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATGGCCAGGGTTAATGTCGAAAAGCCGGAtttttg > 1:1049951/1‑235 (MQ=255)
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TTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑G‑TTTCGCTGATCATTGCT‑GGTTTGC‑T‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGT > NC_000913/4368697‑4369162
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
