Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F17 I0 R1
|
160 |
98.0 |
2214160 |
89.0% |
1970602 |
222.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,170,684 |
T→G |
13.9% |
H1094P (CAC→CCC) |
mfd ← |
transcription‑repair coupling factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,170,684 | 0 | T | G | 13.9%
| 201.3
/ 2.5
| 109 | H1094P (CAC→CCC) | mfd | transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base T (39/43); new base G (16/6); total (60/49) |
| Fisher's exact test for biased strand distribution p-value = 5.32e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 109 total aligned reads displayed.
TGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGAA > NC_000913/1170452‑1170919
|
tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCCCGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCATTCAAATCCTGAATAAATTTCCGGCGCGTCGGACCATCAAGTCGGTAATGCTCCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATAAACGTGAatct > 1:345327/1‑239 (MQ=255)
tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTTGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCCAGGCGCTAATGCTGCGGCGGTTTTTGCAGCAAACCAACCAAACAGGCCGGATTAAAGTGGtttt > 2:187497/1‑237 (MQ=255)
tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCCAGGCGGTAATGCTGCGGCTGTTTTTGGCGGAAACCAATCAAACAGGCCGGAGTAACGTGAgtct > 2:687034/1‑239 (MQ=255)
tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCG‑TTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGCTTAACGGGAttct > 1:1002998/1‑238 (MQ=255)
gCAGGGAATGGCAAATATTTTTGTAATGTTGCAGGTGGGGGTGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGATCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGAttctt < 2:428743/239‑1 (MQ=255)
cAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAACTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGAttcttt > 1:533306/1‑238 (MQ=255)
ggAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCGGCAAACCAATCAACCAGGCCGGGTTAACGTGATTCTTCT‑Cg > 1:679346/1‑239 (MQ=255)
ggAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGGTTAACCGGATTCTTCT‑Cg > 1:365245/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGACTAAATTTCAGGCCCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTTCAGCAAACCAAACAACCAGGCCGGATAAACGGGATTCTTTT‑Cgcgaaa > 2:219922/1‑234 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAACTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCCGTTTTTTAAGCCAACCAATCAAACCAGCCGGATTAACGGGATTTTTTT‑CGGCaaa > 2:1100399/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGTACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCCGGCCGGATTAACGGGATTCTTCT‑CGGCaaa > 1:618694/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCCAGCCAATCAACCAGCCCGGATTAACGGGATTTTTAT‑CGGCaaa > 1:465935/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCACCCAGGCCGGATTAACGTGATTCTTCT‑CGGCaaa > 1:565792/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGCTTAACGTGATTTTTTT‑CGGCaaa > 1:184989/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTTTTCT‑CGGCaaa > 1:431556/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAAACAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCaaa > 1:795679/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCCGTTTTTTCCGCAAACCAATTAACCCGCCCGGATTCACGGGCTTCTTCT‑CGGCaaa > 2:164712/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATACAGGCGGTAATGCTTCGGCTGGTTTTGCAGCAAACCAATCAACCAGGCCGGATTAAAGGGATTCTTTT‑CAGCaaa > 2:832499/1‑239 (MQ=255)
tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCAGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATACGATACGCGTTTTCCGCTCACTCAAATACTGCATAAATTTCAGGCGCGTCGGACCATCACGGCGGTAATTCTGCGGATGTTTTTGCAGCAAACAATCCCACCAGGCGGGATTCACGAGAtttcccaccgcaaa > 2:743205/1‑227 (MQ=255)
cAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCCAACCAATCAACAAGGCCGGATTAACGGGATTCTTCT‑CGGCAAAt > 1:422784/1‑238 (MQ=255)
ttGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGCTACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTTT‑CGGCAAATTCGTT‑CA‑c > 1:36826/1‑238 (MQ=255)
aaTGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGcc < 1:79611/239‑1 (MQ=255)
gCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGGAAATTCGAT‑AC‑CCCCGCCTTtctc > 1:1064784/1‑239 (MQ=255)
gggggCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGAGATTCTTCT‑CGGCCAATTCGAT‑CACCCCCGCCTTTCTCATTa > 1:504991/1‑238 (MQ=255)
gccgaGAAACCCCCCCGGTTTGCCATTAAGCGATCGCGTTCCTTTCCCATTCACGCATAAACTGGCGTACCCATTCGATCCGCGTTTTCCGCTCACTCAAACCCTGAATAAATTTCAGGCGCTTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAATCCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTc < 2:141531/234‑1 (MQ=255)
cgcAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCa > 1:814540/1‑239 (MQ=255)
aGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGTTTAACGCGATTCTTCT‑CGGCAAATTCAAT‑CA‑CCCCCCCTTTCTCATTACCTTCCAGCTTCCTTAA‑CCCCCATTTCcgcg > 2:135761/1‑236 (MQ=255)
aTCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGCATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATCCTGCGGCTGCTTTTGCAGGAAACCAAGCAACCAGAGCGGGTTAACGTGACTCTTTT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTTTCACTCACTTCCACCTTCCTCTC‑CCCCAGTTTCTGCCCTTGcgg > 2:590739/1‑237 (MQ=255)
aTCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCCATACCCTCCCGCCTCCCTGT‑CCCCCGTTTCtaccccctcgg > 2:763358/1‑229 (MQ=255)
aTCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAAAGGGATTCTTTT‑CGGCCAATTCGAT‑CA‑CCCCCCCTTTCCACTTACATCCCACCTTCCTGAA‑CCCCACGTTCttgcatttctg > 2:386609/1‑229 (MQ=255)
tCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGCTTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCCTTCTCATTACCTTCCAGCTTCCGTGT‑TCCCAGTTTCTGCGCTTGCTg > 1:39986/1‑238 (MQ=255)
tCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGCGATTCTTTT‑CGGCAAATTCGTT‑CG‑CCCCGCCTTTCCCATTACCTTCCATCTTCCTTAT‑CCCCaactttggccccttggtg > 2:433642/1‑222 (MQ=255)
cgttttttttCCATTTCCCCCATAACAGGTCGTACCCTTTTTATTCGCGTTTTTCGTCCACTCAAATCCTGATATAATTCCAGGCGCGTCGGACACTCAAGGCGGGAAGGCGGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGAGTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGgcg < 2:628644/231‑1 (MQ=255)
tttCTCTTCCAGTTCACGCAAAAACGGGCGTACCCATTCGATACGCGTTTTCCGCTACCTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCa < 1:1100399/238‑1 (MQ=255)
ctctTCCCGTTCACCCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGAc < 1:19321/239‑1 (MQ=255)
ctctTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGGTTAACGTGATTTTTCT‑CGGCAAATTCGGT‑CA‑CCCCGCCTTTTCCATTACCTTCCAGCTTCCTGATCCCCCGGTTTCGGC‑CTTGCTgggcccaac > 2:941485/1‑232 (MQ=255)
ctctTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGAc < 1:219922/239‑1 (MQ=255)
ctctTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCCGGCGCAGAc > 1:805688/1‑239 (MQ=255)
ttCCAGTTCCCGCATAAACTGGCGTCCCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACggg < 1:832499/239‑1 (MQ=255)
ttCCAGTTCACCAATAAACTGGCGTACCCATTCTATCCGGTTTTTCCGATCAGCAAAACCGCGAAAAAATTTCAGGCGCGGCGGACCACCAAGGCGATAAGGCTGCGGCTGTTTTTGCAGCAACCCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACggg < 2:184989/239‑1 (MQ=255)
ccAGTTCCCCAATAAAGTGGGTTTCCCATTGGATACGGTTTTTCCCGTCCCCAAAACTCTGAATAAATTTCAGGCGCCTCGGACCATCAAGGCGGTAATGCTGCGGCTTTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAC‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa < 2:431556/239‑1 (MQ=255)
ccAGTTACCGCATAAACTGGCGTACCCTTTCGATCCGCGTTTTCCGCTCCCTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa < 2:53017/239‑1 (MQ=255)
aGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGCTTCTTCT‑GGGCAAATTCGCT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGCT‑CCACAGTTTCTGCGCTTGCTGCGCCAGCCGGGCAat > 1:515506/1‑239 (MQ=255)
ttCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCt > 1:110278/1‑198 (MQ=255)
ttccccATAACCCGGTGTCCCCATTGGATACCCGTTTTCCGCCCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATc < 2:805688/234‑1 (MQ=255)
cACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGGTTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCCGTTTCTGCCCTTGCTGGCGCAAACGGGCAATATcc > 1:544722/1‑239 (MQ=255)
cACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGCTTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGTTGGCGCAGACGGGCAATATca > 1:299952/1‑238 (MQ=255)
cGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCCTTACCTTCCAGCTTCCTGAT‑CCCCAGATTCTGCGCTTGCTGGCGCCGCCGGGCAATATCca > 1:477515/1‑238 (MQ=255)
cGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGGAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCCTTCTCATTACCTTCCCACTTCCTGAT‑CCCCCAGTTCTGCGCTTGTTGGCGCCACCGGGCAataccaac > 2:410301/1‑234 (MQ=255)
caaataccggcctccccAGTCGATGCGGGTTCTCCGCTCCCTAAAAGCCTGAATAAATTTCAGGCGCGAGGGACCATCAAGGCGGTAATGCGGCGGCTGTTTGTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CTCCGCCTGTCTCATTCCCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCcagca < 2:991734/225‑1 (MQ=255)
aaCTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CCGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAACTTCCCTAT‑CCCCACTTTTTCCGCTTGCTCGCCCACACGGGCAAAATCcacccaggt > 2:764487/1‑232 (MQ=255)
ccTGGCGTCCCCGTTCGATCCGGGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCCCCTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAATCCAATCAACCAGGCCGGATTAACGTGATTCTTCC‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTa < 1:209273/238‑1 (MQ=255)
gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCCAACCAATCAACCAGGCCGGATTAACGGGATTCTTTT‑CGGCAAATTCGGT‑CA‑CCCCGCCTTTTCCATTACCTTCCACCTTCCCGGT‑CCCCAGTTTCGCCGCTTTCTGGGGCAACCGGGCCAAATCcacacggggacagc > 2:1013651/1‑227 (MQ=255)
gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa > 2:283113/1‑220 (MQ=255)
gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa < 1:283113/220‑1 (MQ=255)
gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTAcgc > 1:806643/1‑238 (MQ=255)
gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑AA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CGCCAGATTCTGCGCTTTCTGTCGCAGACGGGCAATATCCAGCAGGGtcagc > 1:1040387/1‑234 (MQ=255)
cttACCCATTCGATTCGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTAcgcg < 1:135761/236‑1 (MQ=255)
aTTCGATTCCCGGTTTCCGCTCACTCAAAGCCTGAATAAAGTTCGGGCGTGCCGGACCAGCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGAAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCt < 2:379834/239‑1 (MQ=255)
tCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTACTGCTGCGGCTGTTTTTGCAGCAAACCAAACAACCAAGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCCTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCCGTTTCTGCGCTTTCTGGCCCCACCGGGCAATATCCAGCCGGGGACCCGCCGGATCTgg > 2:923173/1‑239 (MQ=255)
gATCCGCGTTTTCCGCTCCCTCAAACCCTGAATAAATTTCAGGGCCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGgca < 1:521570/239‑1 (MQ=255)
ttttCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCCGCAGGCCg > 1:687710/1‑239 (MQ=255)
ttCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACCGGCAATATCCAACAGGGTACGGGCCGGATCTGGCAGCAGGCCGaa > 1:390809/1‑239 (MQ=255)
tCCGTTCACTCAAATCCTGAATAAATTTGCGGCCAGTCGGACCATCAAGGCGGTAATGCTGCCGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAG‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAg < 1:671091/239‑1 (MQ=255)
cGCTCCCTAAAATCCTGAATAAATTTCAGGCGCGCCGGACCAGCAAGGCGGTAATGTTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CT‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGcg < 2:795679/239‑1 (MQ=255)
cGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAACCCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGcg < 1:941485/239‑1 (MQ=255)
cctcctctaaaCCCTGAAAAATTTCCGGGCGCCTCGGACCATCCAGGGGGTAAGGCCGGGGCTGTTTTGGCAGCAAACCAATCAACCAGGCCGGATTAACGGTATTCTTCC‑CGGCAAATTCGATCCC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGcg < 2:504991/231‑1 (MQ=255)
cctcaAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTAcgcg < 1:483036/208‑1 (MQ=255)
atcatggaaaaattgtcagcgcGTCGCAACACAAAGGGGGTTATGCGGGGGCTTTTTGTGCAAGAAACCAATCAACCAGGCCGTGTTAAGGTGATTCCTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTTATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGCACGCGCCGGATCTGGCAGCAGGCCGAAGCTATCGATAAGCt < 2:618694/221‑1 (MQ=255)
acccttattaaatttccgcgggctCGGAACAGCAAGGCGGTAAAGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCt < 2:365245/216‑1 (MQ=255)
tCCTGAATAAATTTCAGGCGCGTCGGACCACCAAGGGGGTAATGCGCCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa < 2:532791/183‑1 (MQ=255)
aaataaTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTCCGGCTGTTTTTGCAGCAAACCAATCACCCCGGCCGGATTAACGTGATTCGTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCATCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACtt < 2:1064784/235‑1 (MQ=255)
aaTAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCCATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCCAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCATCTTCCTGAT‑CCCCAGTTTCTCGCCTTGCTGGCGCGGACGGGCAATATCCAGCAGGGTACGCCCCCGACCTGGGCGCAGCACGAAGAGATCGAAAAACCCGa > 2:299008/1‑236 (MQ=255)
aaTAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCCGGCCGGATTAACGTGATTCTTAT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCACCAGGGTACCGGCCGGATCTGGCAGCAGGCCGCAGCGAACGATAAGCACGACtt > 1:407341/1‑239 (MQ=255)
aaTAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCCGCTTCCTGAT‑CCCCAGTTTCTGCGCTTTCTGGCCACAACGGGCAAACTCCCGCAGGGAACGCCCCGGATCTGGCCGCAGGCGGaaaggagcggaaaacgagactt > 2:730520/1‑219 (MQ=255)
aaTAAATTTCAGGCGCGTCGGAACATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCACGCCTTTCTCATTACCTTACAGCTTCCTGAT‑ACCCCGTTTCTGCGCCTGCTGGCGCCGACGGGCACTATCCCGCCGGGGACGCCCCGGCTCTGGCAGCGGGCCGacacgctaggaaagcagcaatt > 2:630093/1‑218 (MQ=255)
aTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCcagca > 1:532791/1‑183 (MQ=255)
aTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGAGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGAACGCGCCGGACCTGGCAGCAGGCCCAAGCGATCGATAAGCTCGCCTTTGa > 1:1011151/1‑237 (MQ=255)
aGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCtt > 1:17806/1‑238 (MQ=255)
gcgcGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCCGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGTACTCTTc > 1:713026/1‑237 (MQ=255)
gttattcggggggtGTTTTTGCCACAAACCCAGCAACCAGGCCGGTTTAACGTGATTCTTCT‑CGGCAATACCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGgcg < 2:17806/225‑1 (MQ=255)
gTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCCCGACTTTGATCTCTTCCAGt > 1:1062405/1‑220 (MQ=255)
tAATGCTGCGGCTGATTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑TA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTCCGCTTGCTGGCGCAGACGGGCAATATCCAGTAGGGTACCCGCCGGCTCTGGCAGCAGGCCCAAACGATCGCTAAGCTCAACTTTGATCTCTTCCAGTTCGTTTTCCCTTTTGgc > 1:664638/1‑236 (MQ=255)
tgcggtcTGTTTTTGCCGCAACTCAACCAACACGGCCCGTTTACCGTGATTCTGCC‑CGGACAATTCCAT‑CC‑CCCCGCCGTTCTCATGTCCTTCCAGTGTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGGaa < 2:515506/233‑1 (MQ=255)
ctgcGGCTTTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCaa < 1:511656/239‑1 (MQ=255)
cgcGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGGT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCaa < 1:1013651/237‑1 (MQ=255)
gcGGCTGTTTTGGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATa < 1:386609/239‑1 (MQ=255)
cGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATAc > 1:117114/1‑239 (MQ=255)
tttttCCAACAAACCTATCAACCAGGCCGAATTAACGTTTTTCTTCT‑CGGCAAATCCGAT‑CT‑CCCCGCTTTGCTCATTACCTTCCAGCTTCCTAAT‑CCCCAGTTTCGGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATACGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACCTTTGt < 2:533306/239‑1 (MQ=255)
tttcactcacaCCAATCCCCCCGGCCGTATTTACGTTTTTTTTCG‑CGACAAATTCGTT‑CC‑CCCCGCCGTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCCGTTTCGGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAg < 2:422784/229‑1 (MQ=255)
caACCCATTCACCCAGGCCGTTTTATCTGTATTTTGCT‑CGGCAAATTCGAC‑CC‑CCCCCCCTTTCTCATTCCCTTCCAGTTTCCTGAT‑CCCCAGTTTCTGCGCTTGCGGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACa < 2:544722/239‑1 (MQ=255)
caAACCAATCAACCAGGCCGGATTAACGTGATTCTTCC‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACa < 1:730520/239‑1 (MQ=255)
caaaccaCCAGGCCGAGTTAACTGTCTTCTTCT‑CGGCAAATTCGAC‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAAGATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGAcgc < 2:228366/233‑1 (MQ=255)
caCCAGGCCGGTTTGACGTTTTTCTCCT‑CGGCAAAGTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGtt < 2:63490/238‑1 (MQ=255)
accccggCCGTATTTACGTGTTTCTTCT‑GCGCAAATTCGAT‑TC‑CCCCGGCTTTCTCATTCCCTTCCAGCTTCCTGAT‑CCCCATTTTCTGCGCTGGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGtt < 2:477515/234‑1 (MQ=255)
aaccgggcagttttACCGTGCTTCTTCT‑CGGCAACTTCGTT‑CC‑CCCCGCCTTCATCATTACCTTCCAGCTTCCTGCT‑CCCCAGTTTCTGCGCTTGCTGGGCCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTGTGATCGCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGtt < 2:637864/227‑1 (MQ=255)
aGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTGGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGCCAATCGGTTTGAGGACGGACAGCCGCGCGtttagt > 1:938587/1‑235 (MQ=255)
gCCGGTTTCACTTGATTCTTCC‑CGGAAAATCCGCT‑CA‑CCCCCCCTTTCCCATTGCCTTCCAGCTTCCGGAC‑CCCCGGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTc < 2:117114/239‑1 (MQ=255)
ccGGATTAACCTG‑TTCTTTTCCGCCAAATTCCAT‑CC‑CCCCTGCTGTCTCATTACCTGCCAGCTTCCTGAT‑CCCCAGTTTCGGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTc < 2:36826/238‑1 (MQ=255)
ccGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTCCCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGaa < 1:278008/238‑1 (MQ=255)
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TGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGAA > NC_000913/1170452‑1170919
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
