Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F17 I0 R1	160	98.0	2214160	89.0%	1970602	222.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,435,704	G→A	12.1%	intergenic (‑85/+56)	uspF ← / ← ompN	stress‑induced protein, ATP‑binding protein/outer membrane pore protein N, non‑specific

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,435,704	0	G	A	12.1%	193.4 / 3.2	75	intergenic (‑85/+56)	uspF/ompN	stress‑induced protein, ATP‑binding protein/outer membrane pore protein N, non‑specific
Reads supporting (aligned to +/- strand): ref base G (54/9); new base A (3/7); total (59/16)
Fisher's exact test for biased strand distribution p-value = 5.73e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACA  >  NC_000913/1435467‑1435940

aCCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGa                                                                                                                                                                                                                                               >  1:473012/1‑239 (MQ=255)

                  gggCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATTACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTAAAT‑TTAGATAAAA‑G‑GGGGAAGAaaaa                                                                                                                                                                                                                           >  2:399098/1‑239 (MQ=255)

                    gCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCACA‑G‑GAGGAAGAATAAGc                                                                                                                                                                                                                         >  1:1024639/1‑239 (MQ=255)

                     cAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAAAGAGGCTAATCACGCGTTGAGTTAATTCTGAATCGGCAATAT‑CGAAAGGGACAAGAAACGGTCTGTT‑CATAAAA‑ACTCCTGTATTAGTATCCGCATAAAGTGAA‑ACGCCAGAGGAAACTTTTT‑TGGA‑‑AAAGAC‑GGGGTAAAAATGTTTAAT‑TTAAAAAAAA‑G‑GAGGAAGAAAAAACa                                                                                                                                                                                                                        >  2:604244/1‑239 (MQ=255)

                       gTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGTAAATAT‑CGATAGGGACAAGAACCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGAATCCGCATAAAGTTAA‑ACGCCCGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑AAGGAAAAATAAGCaaa                                                                                                                                                                                                                      >  2:532745/1‑237 (MQ=255)

                        tGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CCTAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑CAGCCCGATTACACTTTTT‑TTGT‑‑AA‑GACGGGAGTTCACATTTTTAAT‑TTAAGACAAA‑G‑GAGGAAAAATAAGcgaaa                                                                                                                                                                                                                     >  2:979297/1‑235 (MQ=255)

                        tGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAgaagaa                                                                                                                                                                                                                     >  1:1093464/1‑239 (MQ=255)

                        tGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GGGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGTAAGAATAAgacgaa                                                                                                                                                                                                                     >  1:555980/1‑234 (MQ=255)

                          aaGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGGGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGaaaa                                                                                                                                                                                                                   >  1:104927/1‑239 (MQ=255)

                             gTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑TTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAg                                                                                                                                                                                                                 >  1:471070/1‑238 (MQ=255)

                                 tACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGc                                                                                                                                                                                                            >  1:219085/1‑239 (MQ=255)

                                      tCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGCAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGTTCAAT‑G‑GAGGAAGAATAAGCAGAAAAACCCCCCCATa                                                                                                                                                                                                        >  2:623170/1‑238 (MQ=255)

                                        aGGAAATGCACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGCTGAGTTAATTCTGAATCGGAAATAT‑CGACAGGTACACGCATCGCTCTGTT‑CATAAAA‑CCTCCGGTTTTAGAATCCCCAAAAAGTCTA‑ACGCCAGCTGGCACTTTTT‑GTGT‑‑AATAAC‑GGAGTTCACATTTTTAAT‑TTAAACCCAA‑G‑GCGGCAACATAAACAACAAAACCCCCCAATaaaa                                                                                                                                                                                                     >  2:789356/1‑237 (MQ=255)

                                        aGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAATTAT‑CGATAGGGACAAGAGTCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑TTGT‑‑AATGAC‑GGCGTTCCCATTTTTAAT‑TTATATCAAA‑G‑GAGGAAGAATAACAAAAAAAAGCCCCCCAAAACa                                                                                                                                                                                                     >  2:412392/1‑239 (MQ=255)

                                        aGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GCGGAAGAATAAGCAGAAAAAGCCCCCCATaaa                                                                                                                                                                                                      >  1:625926/1‑237 (MQ=255)

                                        aGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACa                                                                                                                                                                                                     >  1:552642/1‑239 (MQ=255)

                                                        catcatCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTAACATTTTTAAT‑TTAGATCAAT‑G‑AAGGAAGAATAAGCAGAAAAAGACACCCAAAAAACCGGGCagagagattt                                                                                                                                                                                     >  2:97201/1‑231 (MQ=255)

                                                             tcaATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGAGAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGCTGACACTTTTT‑GTGT‑‑ACTGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGAAGGAGGAGTTAGAAc                                                                                                                                                                                >  1:1037971/1‑239 (MQ=255)

                                                             tcaATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAACAGAAAAAGCCCGCCCTAACACCGGGCAGGAGGATTTAGAAc                                                                                                                                                                                >  2:1033537/1‑239 (MQ=255)

                                                                     cgCCTCTCCCTCAACGGGGAAAATCACGGGTTGTATTAATTCTGAA‑CCGAAATGTGCGAAAGGAACAAGAATCGTTCTGTT‑AAAAAAC‑CCCCCTGTTTGAGTACCCGATAAAAGTGAA‑CCGCAAGAGGACCTTTTTT‑GTTA‑‑AATGAG‑GGAGTTCACATTTTAAAT‑TAAGATCAAG‑G‑GAGGAAAAAAAAGAAAAAAAACCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAAc                                                                                                                                                                        <  1:623170/238‑1 (MQ=255)

                                                                      gCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGCGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATATGCAGAAAAAACCCGCCATAACAGCGGGCAGGAGGGTTTAAAAACGAAAAAca                                                                                                                                                                       >  2:478216/1‑238 (MQ=255)

                                                                       ccTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAAAAGCGGGCAGGAGGATTTAGAAATGAAAAAcaa                                                                                                                                                                      >  2:180703/1‑237 (MQ=255)

                                                                           ttCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCCTAACAGCGGGCAGGAGGATTTAGAACTGATaaaccaaacc                                                                                                                                                                  >  1:432727/1‑239 (MQ=255)

                                                                                 aaCGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCCGAAAAAGCCCGCCATAAAAGTGGGCAGGGGGGTTTAGAACTGAAAAACCAgcaccaaaac                                                                                                                                                            >  2:710805/1‑230 (MQ=255)

                                                                                     tGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGCGTA‑ACGCCAGATGACACTTTTT‑TTGT‑‑AAGGAC‑GGAGTTAACATTTTTAAT‑TTAGATCAAa‑g                                                                                                                                                                                                                                        >  2:319405/1‑160 (MQ=255)

                                                                                       gCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAat                                                                                                                                                      >  1:253979/1‑239 (MQ=255)

                                                                                        ttaatcctggtttGATTTATTTCTCAACGAGAATTAG‑CGATAGGGAAAAAAATCGTT‑TCTT‑CAAAAAACCCTCTTTTTTTATTTACCGAAAAAAGTGAA‑ACGCCAGATGAC‑TTTTTT‑GTTTA‑AAGGAC‑GGATTTATCATTTTTAAT‑TAAGAAAAAG‑G‑GAGAAAAAATAAGCAAAAAACGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAat                                                                                                                                                      <  2:859144/227‑1 (MQ=255)

                                                                                        taaagcacgatgtGATTTAATTGTGAAGCGAAAATAC‑GGATAGGGA‑AAAAAAGGTTTGGTTACATAAAA‑CCCCCTTTTTAATTATCCGCATAAAGTTAA‑ACGCGAGATG‑GACTTTTTGGGGA‑‑AATGAC‑GGAGTCAACATTTTAAAT‑TAAGACCAAG‑G‑GAGAAAGAAGAAGAAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTGAGAACTGATAAACCAGACCTAAAGCGACAat                                                                                                                                                      <  1:789356/226‑1 (MQ=255)

                                                                                         taaaactcgtttGTGTTTATTTTTAAGCGGAAATTT‑CGAAAGGGAAAAGAGTTTTTTTGTT‑AAAAAAC‑CCTCTTTTTTTTGTCTACCCA‑AAAATGTATAAGCCA‑AAGAGACCTTTT‑GGGTAAAAGGGG‑GGAGTCCACTTTTTAAAT‑TTAGAAAAAG‑G‑GGAAAAGAAAAAGAAAAAAACGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAat                                                                                                                                                      <  2:601421/228‑1 (MQ=255)

                                                                                                 cgTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACATCGGCAAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTa                                                                                                                                            >  1:606007/1‑239 (MQ=255)

                                                                                                 cgTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTa                                                                                                                                            >  1:882729/1‑239 (MQ=255)

                                                                                                    tGATTTATTTCTAAAGCGAAAATAT‑GAATAGGCAAAAAAATCTTTCTGTT‑AATAAAC‑CCCCCTTTTTAAGTATCCAAAAAAAGTGAA‑CCGCAAGATGACTCTTTTT‑GTGT‑‑AATGAC‑GGAGTTCATATTTTTAAT‑TTAAAAAAAA‑G‑GAGAAAAAAAAAGCAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTagag                                                                                                                                         <  1:180703/239‑1 (MQ=255)

                                                                                                                gAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCgg                                                                                                                                              >  1:338971/1‑222 (MQ=255)

                                                                                                                gAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCa                                                                                                                             >  1:714493/1‑239 (MQ=255)

                                                                                                                gAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAACTAAAGCGAAAATAACACAGGTCGAGATGACAATggaa                                                                                                                             >  2:238290/1‑237 (MQ=255)

                                                                                                                 aaTCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAg                                                                                                                            >  1:256476/1‑239 (MQ=255)

                                                                                                                       aaaTAT‑GGAGGGGAAAAAAAATTGTTCTTTA‑AAAAAAC‑CCTCTTTTTTTAGTTCCCAAAAAAAGTTAA‑CCGCAAGATGA‑ATTTTTT‑GGGTA‑AAGGAG‑GGAGTTCACATTTTAAAT‑TAAGAAAAAA‑G‑GAGGAAAAAAAAGAAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAg                                                                                                                       <  1:604244/238‑1 (MQ=255)

                                                                                                                         atgtgtaaaagagACAGGATTTGTTGTTTT‑CATAAAC‑CCTCCTGTTTTAGTACCCGAATAAAGTGAA‑ACGCCAGATGACTTTTTTT‑GTAT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TAAAATAAAG‑G‑GAGAAAAAATAAGCAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGa                                                                                                                      <  1:215378/226‑1 (MQ=255)

                                                                                                                              cGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAAATGCCATTGGCAGCGTAGAAGcagc                                                                                                                >  1:463793/1‑236 (MQ=255)

                                                                                                                                          gAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCAACAATACCAACGGGAAAGAAGCCATTGGCAGCGAAAAAACGGTCAACttacacca                                                                                                    >  2:885005/1‑233 (MQ=255)

                                                                                                                                              cGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAACGAAAAAACTGTAAAATTCATCCAAAAg                                                                                                >  2:374573/1‑239 (MQ=255)

                                                                                                                                                ttCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGc                                                                                                                                                                                               >  1:930785/1‑142 (MQ=255)

                                                                                                                                                ttCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGt                                                                                              >  1:539514/1‑239 (MQ=255)

                                                                                                                                                ttCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGGGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGCAGCATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTATAAGCTGTCATCTTCATCCAACAGGt                                                                                              >  1:711003/1‑239 (MQ=255)

                                                                                                                                                  cTGTT‑CATAAAA‑CCTTCTGTTTGAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGCGTTCACATTTTTAAT‑TTATATCAAA‑G‑GAGGAAGAATAAGCAGACAAAGCCCGCAATAACAGCGGGAAGGAGGATTTCGACCTGATAAACAAGAACTAAAGCGAAACTATCATCGGTAGAGATGCCATTGGCAACTAAAAAGGAGTCATCTTCAACCAAAAGGTTg                                                                                            >  2:794111/1‑239 (MQ=255)

                                                                                                                                                     tt‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAACGGCAATATCATCGGTAGAGATGCCATTGGCAGCGAAAAAGCTGTCacccttgtcccttaaaaaaaac                                                                                         >  2:215378/1‑218 (MQ=255)

                                                                                                                                                              a‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTc                                                                                 >  1:678399/1‑239 (MQ=255)

                                                                                                                                                                    ctGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCAGTCATCTCAATCCAACAGGTGGATTTTATAGTCAACga                                                                            >  1:232079/1‑238 (MQ=255)

                                                                                                                                                                           attccccaaaaatagtaga‑aCGCCAGATGCCTTTTTGT‑GGTT‑‑AATCGC‑GGGGTTCAAATTTTTAAT‑TAAAATCAAG‑G‑GAGAAATAAAAAGAAGAAAATGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGa                                                                     <  1:363697/221‑1 (MQ=255)

                                                                                                                                                                             tATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAATCTGTCATCTTCATCCAACAGGTTGATTTTATATCAAAAGAAGGTGGaaa                                                                   >  2:518043/1‑237 (MQ=255)

                                                                                                                                                                              aTCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGAAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGTTTTTATAGTCAACGTAGGTGGACAt                                                                  >  1:986202/1‑239 (MQ=255)

                                                                                                                                                                                 cGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGaa                                                                                                                                                                                 >  1:726683/1‑125 (MQ=255)

                                                                                                                                                                                 cGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGCCATGtt                                                               >  2:869/1‑239 (MQ=255)

                                                                                                                                                                                 cGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGtt                                                               >  1:760898/1‑239 (MQ=255)

                                                                                                                                                                                 cGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGAGGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGACAACGAAGggggcaaagtt                                                               >  2:742410/1‑232 (MQ=255)

                                                                                                                                                                                           gtA‑ACGCCAGCTGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GTGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACCGATAAACCAGACCTAAAGCGACAATATCATCGGTATGGATGCCATTGGCACGATAGAAACTGTCATCTTCCTCCAAAAGGCTGATTTTATAGTCAACGAAGGGGGACATGTTTTTTATGaaa                                                     >  2:989249/1‑239 (MQ=255)

                                                                                                                                                                                             gtaacccaaaatgcacTTTTTGGTGA‑‑AATGAC‑GGATTTCACTTTTTTAAT‑TTAGAAAAAG‑G‑GAGAAAAAAAAAGCAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGaa                                                      <  1:885005/225‑1 (MQ=255)

                                                                                                                                                                                             a‑aCGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATa                                                   >  2:332021/1‑239 (MQ=255)

                                                                                                                                                                                               aCGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAg                                                  >  1:980520/1‑239 (MQ=255)

                                                                                                                                                                                               aCGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAg                                                  >  1:412979/1‑239 (MQ=255)

                                                                                                                                                                                                     gATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGaa                                                                                                                     >  1:428107/1‑166 (MQ=255)

                                                                                                                                                                                                          ttgttttt‑GTGA‑‑AATGAC‑GTAGTTCAATTTTTTAAT‑TAAAAACAAA‑G‑GAGAAAAAATAAGCAAAAAAACTCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCgcgc                                        <  1:264654/235‑1 (MQ=255)

                                                                                                                                                                                                           acTTTTT‑GTGT‑‑AATTAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGAAGGAGTTAGAAGTGATAAACCAAGCCGAAAGCGACAATATCATCGGTAGAGATGCCATTGGGACCGTAGAAGCTGTCATCTTGATCCAACAGTTTAATTTTATCGTCAACGTAGGAGGCCATGTTTTTATTTAAAAAAAAAACCGCGCCa                                      >  2:648930/1‑239 (MQ=255)

                                                                                                                                                                                                                   ttttttgtatggacggtttatattttttAAA‑TTAAAAAAAAGG‑GAGAAAAAAAAAACAAAAAACGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAata                                   <  2:760898/216‑1 (MQ=255)

                                                                                                                                                                                                                      t‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGt                            >  1:893449/1‑239 (MQ=255)

                                                                                                                                                                                                                      gtgaagtgtagggtttCATATTTTATAT‑TTAGAAAAAG‑A‑GAAGAAAAAAAAAGAAAAAAACCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCgg                               <  1:979297/225‑1 (MQ=255)

                                                                                                                                                                                                                       gtgtacagatggttttaattttttAAA‑TTAAAATAAA‑GAGAGAAAAAATAAGAAAAAAAAGCCCGTCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCTACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCgg                               <  1:97201/220‑1 (MQ=255)

                                                                                                                                                                                                                          aTGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTaaa                                                                                                                                                              >  1:99190/1‑107 (MQ=255)

                                                                                                                                                                                                                            agagggaaattacaTTTTTAATATAAAAAAAAA‑G‑GAGAAAAAAAAAAAAAAAACACGCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTAt                          <  2:256476/228‑1 (MQ=255)

                                                                                                                                                                                                                                agatacattttttttAAT‑TGAGAAAAAG‑G‑GAGAAAAAAAACAAAAAAAACCCCCGCCATAACAGCGGGAAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAAc                     <  2:859023/229‑1 (MQ=255)

                                                                                                                                                                                                                                 gAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGGCATCTTCATCCACAAGGTTGATTTTATCGTCAACGTAGTTGGCCATGTTTTTATTGAAATAGAAAGTTCCGCCAATATCGGGGGATTTaaac                    >  2:904960/1‑237 (MQ=255)

                                                                                                                                                                                                                                      cacaTTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGGCATCTTCATCCAACAGGGTGATTTTATAGTCAACGTAGGTGGACAGTTTTTTATTGAAAAAGAAAGTGGCGCCAAAATAGGCGAATTTAACCaaa                 >  2:1092095/1‑235 (MQ=255)

                                                                                                                                                                                                                                            tttAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACAt                                                                  >  1:213943/1‑182 (MQ=255)

                                                                                                                                                                                                                                             taaaT‑TGAGATAAGA‑G‑GAAGAAGAAAAAACAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTatca        <  1:412392/237‑1 (MQ=255)

                                                                                                                                                                                                                                                    tAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTatctgtttct  >  1:859023/1‑232 (MQ=255)

ACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATGAACCTCTGCATCATCAATCTTTGCCTCTTCCTCAACGTGGCTAATCACGCGTTGAGTTAATTCTGAATCGGAAATAT‑CGATAGGGACAAGAATCGTTCTGTT‑CATAAAA‑CCTCCTGTTTTAGTATCCGCATAAAGTGTA‑ACGCCAGATGACACTTTTT‑GTGT‑‑AATGAC‑GGAGTTCACATTTTTAAT‑TTAGATCAAA‑G‑GAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATCTTCATCCAACAGGTTGATTTTATAGTCAACGTAGGTGGACATGTTTTTATTGAAATAGTAAGTCGCGCCAATATCGGCGTATTTAACCAGATCTTTATCATCAACA  >  NC_000913/1435467‑1435940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A