Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F17 I0 R1
|
160 |
98.0 |
2214160 |
89.0% |
1970602 |
222.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,103,632 |
A→C |
18.4% |
V448G (GTG→GGG) |
cpxA ← |
sensory histidine kinase in two‑component regulatory system with CpxR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,103,632 | 0 | A | C | 18.4%
| 222.9
/ 5.3
| 98 | V448G (GTG→GGG) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR |
| Reads supporting (aligned to +/- strand): ref base A (48/27); new base C (2/21); total (50/48) |
| Fisher's exact test for biased strand distribution p-value = 2.25e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCGCTGCCGGGTTATCGAAAAGCT‑GGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCC > NC_000913/4103398‑4103861
|
ccGCTGCCGGGTTATCGAAAAGCT‑GGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCa > 1:400754/1‑238 (MQ=255)
cGGGTTATCGAAAAGCT‑GGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCCGCAAATGCGAAGTTTAACTCCCCTTAAAAAAGGGCAACCAAATACCAAGCCGTaa > 2:500178/1‑238 (MQ=255)
gggTTTTCCAAAAGGTGGGCCGCGGGCGATCAAAAAGGCCCGACGAGGCCGAAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCGGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGGAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTaaa < 2:679573/239‑1 (MQ=255)
tCGAAAGCCT‑GGACGCGGAAGATGAAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑a < 1:643740/239‑1 (MQ=255)
aGCT‑GGACGGGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGc < 1:819177/239‑1 (MQ=255)
aGCT‑GGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCCAATGCGAAGTTTAACTACGCTTATACAGAGGCAACCAAATCACCACACGAAAACCCCCC‑AGAGGGc > 2:819177/1‑239 (MQ=255)
aGCT‑GGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATCCGAAGGTTAACTCCGCTTATACACCGGCAACCAAATCAACAACCGAAAACCCCCC‑AGCGGGc > 2:691092/1‑239 (MQ=255)
gACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTTCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCCAATACCCAGCCGTAAACCGCCC‑ACCGGGCTgcc > 1:526425/1‑236 (MQ=255)
cggggACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTCCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGtctt < 1:500178/235‑1 (MQ=255)
aCGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATCAAACGGCAACCAAACAACAACCCACAAACCCCCC‑AACGGGcgagattctgcc > 2:572024/1‑227 (MQ=255)
aaaaGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATAAAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑CCCGGGCTGTCTTCGGCCTTCACCCa > 2:976345/1‑239 (MQ=255)
aaGCGCCCACTGGGGGCAAAGATCAAAGTTTTTCCCCGCCTGGTGGGGGGAAAATAACCCCCGGAGGGTAGGGCTGATCAGCCGTTGTCAGCGCAGCATCAGGGACCCTGCTCAAATGCCGGATGCGGCGTAACCGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGc < 2:876944/239‑1 (MQ=255)
ccgccggtggggCGGCAATAGTGAAATTTTTCCCCCCCGGTTGTGGGGAAAATAGCCCCCGGAGGGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCGCAAATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCa < 2:1025393/228‑1 (MQ=38)
cgcCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACACAGcccc > 1:830131/1‑237 (MQ=255)
cccgatggggCGGAAAGCTCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCa < 1:619543/228‑1 (MQ=255)
ccGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑ACCGGGCTGTCTTCTGCCTTAAACCAGCCACGa > 1:710718/1‑239 (MQ=255)
cgacgggggggCAAGATCGAAAATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 1:389009/229‑1 (MQ=255)
aaGACCGAAATTTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATg < 1:379700/238‑1 (MQ=255)
ccgccgGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGcc < 1:976345/239‑1 (MQ=255)
gAAAATAACACCCGGAGTGTAGGCCTGATAAGACGCTATCACCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCAGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTACACCTCCC‑AGCGGGATGTCTTCCGCCTTCACCCAGCCACGATCCTGCTGAATTGCGG‑C‑TTCCAA‑AAACCCCAA‑CCACaaaaccga > 2:1102405/1‑234 (MQ=255)
aaCCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑G‑TTCCAC‑AAAACCCAC‑CCCCCAAccccaaccccc > 2:163279/1‑230 (MQ=255)
aaCCCCCGGAGTGTAGCCCATGTAAGCCGCTCACGGCGTCGCATCGGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAAGGCGAAGTTTAACGCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGcc < 1:701800/239‑1 (MQ=255)
cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGGCG‑TTAAAC‑AAAC‑ACAG‑CCCCAAAACCATACCCCCac > 2:132066/1‑238 (MQ=39)
cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑CATCGCCAG‑CCCCCAACCTggcccccccg > 1:343366/1‑230 (MQ=255)
ggAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCCGCCACGATGCTGCTGAATGGCGG‑G‑TTCACC‑AATCCCCAC‑CCCCCAAccccaccaccccgatac > 2:525811/1‑223 (MQ=255)
tAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCCAACCtcgtccccccaaattacgatt > 1:815217/1‑218 (MQ=255)
tAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AAACGCCAG‑CCCCAAACCTGTACCCCCAGATTCACAATc > 1:428938/1‑238 (MQ=255)
tGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCCGGTTCACGAACGCGTGCt > 1:687778/1‑239 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc > 2:162489/1‑119 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:162489/119‑1 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc > 2:929456/1‑119 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:929456/119‑1 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCCCGATGCCCCTGAATGGCGG‑TGTTCACC‑AA‑CGCCCC‑CCCCACACCCGTACccccgatgttcccaagacgtggcct > 2:700522/1‑218 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCACC‑AATCCCCCG‑CCCCCAACCCGTACCGCCCGATTAACGTTCGCGTGCtc > 1:499458/1‑237 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCTCCAA‑CCCCCAAACTGTACCGCCAGATTCACGAACGCGGCCTTc > 1:941122/1‑239 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCCAACCCTTACCCCCCGATTCACGATCCCGGGCTTc > 1:1055686/1‑239 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTTGACCGCCCGATTTACCATCGCGTGCtt > 1:718055/1‑238 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑G‑TTCAAC‑AAACCCCAC‑CCCCCAAACCGTACCCCCaaaatacccacccccgggct > 2:413929/1‑219 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCGGTCTTCTGCCTTCACCCAGCCACCATCCTGCTGAATGGCGG‑G‑TTTCAC‑AATCGCCAC‑CCCCCAACCCCTACcccccccatccacctacgcggctt > 2:673834/1‑218 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCACCC‑AGCGGCCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGCGG‑G‑TTCACCAAACCGCCA‑‑CCCCCAACCCCTACCGCCCCATTCAccaaccccaccctc > 2:348547/1‑226 (MQ=255)
aaGACGCTTGCAGCGTCGCACCAGGCATCCTGCTAAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCAt < 1:794192/239‑1 (MQ=255)
cccgtagccgCGTCGCATCGGGCATCCTGCTCAAGTGCCGGATGCGGCGTAAACCGCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCgg < 1:96150/230‑1 (MQ=255)
ccccaaccggCGTCCAATCAGGCATCCTGCTCAAAGGCCGGATGCGGCTTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCgg < 1:213055/230‑1 (MQ=255)
cgctgcccggtggccactaGGCATCCTGCTAAAAGGCCGGGTGCGGGCTAAACGCCTTAACCTGCCGGCAATTTCGAAGTTTACCCCCGCTTAACCGCCGGCACCCAACGCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCgg < 2:84126/220‑1 (MQ=255)
gCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCCAA‑CATTGCCAA‑CCCCAAACCTGTACCCCACAATTTACGAGCCCGCGCTTCATCggc > 1:809421/1‑237 (MQ=255)
aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCCAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑G‑TTAAAA‑CATAGCCAGACCCCAAACC‑GTACCCCCCGATACCCGATCCCGTGCTTAATCGGTACgc > 1:42440/1‑238 (MQ=255)
aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCCGTACCGCCAGATTCACGactgtctcttttacacctctc > 1:254880/1‑218 (MQ=255)
aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTCCTGAATGGCGG‑G‑TTCAAC‑AATCCCCAG‑CCCCCAACCCTTACCGCCCGATTCCCAAACGCGTGCTTCATCgggccaa > 2:684872/1‑234 (MQ=255)
tCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑CATCGCCAG‑CCCCAAACCCTGACCCCCCGATTCACGATCCCCGGCTTCCTccggaggaa > 2:772826/1‑231 (MQ=255)
cGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGGGCTTCCTCGGTACAATGGaa > 1:925831/1‑239 (MQ=255)
cgcctcgggcccctgtcTCAAAGCCCGGGGGCGGGGTAAACCCCTTACCCTGCCTGGAAATGCAAAGTTTAACCCCCCTTATCCAGCGGCAACCAAACCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCCCGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAacg < 2:499458/222‑1 (MQ=255)
cccATCCGGCATCGTGTCCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATTCAGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAacg < 1:268945/236‑1 (MQ=255)
cGCATCAGGCATCCTGCCAAAATGCCGGATGCGGCGGAAACGCCTTAGCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAacg < 1:623270/238‑1 (MQ=255)
aTCCTGCTCAAAGGCCGGATGCGGCGTAACCGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAAt < 1:572024/238‑1 (MQ=255)
tGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑G‑TTCCAC‑AATCGCCAA‑CCCCCAAACTGCACCGCCAGATTCCCGATCGCCTGCTTCACCCGGACAAAAAAACGAAAGG‑aaaaacata > 2:806745/1‑233 (MQ=255)
cTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCCAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGGTAGAACGGACGG‑GAAATCTGttt > 1:758186/1‑237 (MQ=255)
taaagtccggtgggggcgAAAACCCCTTTCCCTGCCTGCAAAGGGGAAGTTTAACCCCGCTTATAACGCGGCAACCAAATCCCCAGCCGTAAACCGCCA‑AGCGGGCCTTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAACCCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑cgcg < 2:1007726/225‑1 (MQ=255)
cAAAGGCCGGTGGCGGCTTAACCGCCTTTCCCGGCCTGCAAATGCGAAGTTTACCTCCGCTTATCCGGCGCAAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAGATCTGTT‑cgcg < 1:580412/239‑1 (MQ=255)
ggggcgTAAACGCCTGCTCCTGGCTGAAAATGCGAAGTTAAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCt < 1:201829/237‑1 (MQ=255)
gcggcgTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCt < 1:413929/239‑1 (MQ=255)
cggcgTAAACGCCTTAGCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCt < 1:691092/238‑1 (MQ=255)
cggcgTAAACCCCTTACCCTCCCTGCAAATGCGAATTTTACCTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCt < 1:700522/238‑1 (MQ=255)
cTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCCGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCa < 1:776899/239‑1 (MQ=255)
cTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCt < 1:932569/226‑1 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCCAACCTGTACCGCCAGATTCACGATCGCGGGCTTCATCGGTACGGTAGAACGGACGG‑GAAAACTTTT‑CGCGATCTTCCGGGCTAAAGCCCGGAcc > 1:253300/1‑237 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCCAACCCGTACCGCCCGATTCACGATCGCGTGCTTCATCGGGACGATAAAACGGACGG‑AAAATCTGTT‑CCCGATCTTCCCGGCTAACCCCCGGaacc > 1:947964/1‑235 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCCGATTCACGATCGCGTGCTTCATCGGTACGAATGAACGGACGG‑AAAATATGTT‑CGCGACCTTCCGGGCTAACCCCAGGACCa > 1:169256/1‑238 (MQ=255)
gcctgcAAATGCTAAGTTTAACTCCGCTTAGACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGGCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:33528/239‑1 (MQ=255)
gcctgcAAATGCGAATTTTAACCCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:326519/239‑1 (MQ=255)
gcctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:295987/239‑1 (MQ=255)
gcctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:772826/239‑1 (MQ=255)
gcctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:246663/239‑1 (MQ=255)
cctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCCGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑GAAATCTGTT‑CCCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc > 1:222518/1‑238 (MQ=255)
cctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGGACGATAGAACGGACGG‑AAAAACTGTT‑CGCGATCTTCCCGGCTAACGCCAGGACCATCgtcgtc > 1:85992/1‑238 (MQ=255)
ctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTTCAC‑AATCTCCAA‑CCCCCAACCTTTACCGCCCGATTCACCGTCACGTGCTTCATCGGCACGCTACAACAGCAGG‑GAAATCTGTT‑CGCGGCCTTCCGGGGCAACCCCACGACCATCGCCGccc > 2:404736/1‑238 (MQ=255)
ctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCCAACCTGTACCCCCAGATTCACGATCCCGGGCTTCATCGGTa > 1:972416/1‑175 (MQ=255)
aaaTGGAAATTTTAACCCCGTTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGt < 1:605863/239‑1 (MQ=255)
aaaTGCGAAGTTTAACCCCGCTTCAACGGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGt < 1:4546/239‑1 (MQ=255)
aTGCGAATTTTCATCCCTCTTAAACGGCGGAACCAAAAACCCCGCCCGAAACCCGCCC‑AGCGGGCTGGCTGCTGCCTTCACCCAGCCACGATGCTGCTGAATGCCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAGCCTGTTCCGCCAGATTCACGATCGCGTGCTTCAGCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTaa < 2:710718/239‑1 (MQ=255)
aTGCGAAGTTTAACCCCGCTTATACAGCGGCCACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTaa < 1:190617/239‑1 (MQ=255)
tttAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATa < 1:397998/239‑1 (MQ=255)
ttactccggtttttcaccgggCAACCAACCCCACTGCCTTAACCCGCCC‑GGCGGGCTGTCTTCTGCCTTCCCCCAGCCCCGATGGTGCTGATTGGCGG‑T‑TTCACC‑ATTCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGTTCGCGTGCTTCATCGGTACGATAGACCGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAc < 2:809421/220‑1 (MQ=255)
ttAACTCCGCTTATACGGCGGCAACCAAATCCCCAGCCGTAAACCGCCC‑AGGGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATa < 1:525811/238‑1 (MQ=255)
taaaagagacagaaccggCGGAAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTAAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATa < 1:826149/221‑1 (MQ=255)
gaaCTCCGTTTATAAAGCGGCAACCAAAGCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTACTGCCTTCACCCAGCCACGATCCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATa < 1:39210/236‑1 (MQ=255)
aCTCCGCTTATACAGCGGCAACAAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCCCGTGCTTCACCGGTCCGCAAGAAAGGAAGGAAAAACCGGTTGCGCCAT‑TTCCGGGCT‑ACACCCGGACCCTCGCCGCCCAccccaaaggggaaaacc > 2:668155/1‑223 (MQ=255)
ccgttttccggcgcCAACCAACCCCCCCGCCGTAAACCCCCC‑AGCGGGCTTTCCTCCGCCTTCCCCCAGCCCCGATGCTGCTGAATGGCGT‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCttt < 2:343366/229‑1 (MQ=255)
cGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAAACTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCCTCGCCCACCGCAATGGGGGTACGGTAttt > 1:861378/1‑239 (MQ=255)
cTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑CATCCCCAG‑CCCCCAACCTGTACCCCCCAATTCCCGATCCCGTGCTTCCCCGGGACCATCGAACAGACGG‑CAAAACTGTT‑CCCGATTTTTCCGGCTAACCCCCGGACCAACCGCCCCCACCCGAAATGTGATACCGTCCTTAt > 2:472357/1‑239 (MQ=255)
cTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CCCGATCTTCCGGGCTAACGCCCGGa > 1:1033947/1‑202 (MQ=255)
attATACAGCGGCAACCAACTCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑A‑TTTAAC‑AACTCCCCG‑ACCCCAACCTGGACCGCCAGAGTTCCGATCGAGTGCTTCATCCGTACGAAATAACGGGAGG‑GCAATCTTTT‑CTCGCTCTCCCGGGCTCCAGCCACAACCATGGACGTCAAACGTATAGGGGATAccccgctttt > 2:657477/2‑231 (MQ=255)
gCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAAAGCCCGGACCCTCGTCGCCCCCCGTAAAGGGGCTACCGCCTTTTTCTACCCCa > 1:1010456/1‑239 (MQ=255)
acgcccaCCAAATCCCCGCCCGGAACCCGCCCGTGGGGGCT‑TCTTCCGCCTTCACCCAGCCCCGATGCTGCGGAAGGGCAG‑T‑TTCAAC‑AAGCCCCCG‑CTCCAAACCTGTACCGCCCGATTCACGATCGCGTGCTTCATCGGTCCGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCa < 2:1028562/233‑1 (MQ=255)
cGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTTACGATCGCGTGCTTCATCGGTACGATAGAAAGGACGG‑AAAATCTGTT‑CGCGATCTTCCCGGCTAACGCCCGGACCACCGTCGTCCACCGCAATggctggcccttttaaacatctccga > 1:449344/1‑215 (MQ=255)
cGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCCCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCCCCGTAATGGTGATACCGTCTTTTTTTACCGCaa > 1:867853/1‑239 (MQ=255)
ggCAACCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCCGCCTTCACCCAGCCGCGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCa < 1:73263/237‑1 (MQ=255)
aaCCAAATCCCCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGcc < 1:163279/239‑1 (MQ=255)
aaCCAAATCCCCAGCCGGAAACCCGCC‑AGGGGGCTGTCTTCTGCCTTCCCCCAGCCGCGATGCTGCCGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGc < 1:635347/238‑1 (MQ=255)
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CCGCTGCCGGGTTATCGAAAAGCT‑GGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCC‑AGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGG‑T‑TTCAAC‑AATCGCCAG‑CCCCAAACCTGTACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGG‑AAAATCTGTT‑CGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCC > NC_000913/4103398‑4103861
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
