Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I0 R1 140 172.9 3477528 97.9% 3404499 226.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,782,920 G→C 10.6% G247G (GGC→GGG)  gpsA ← glycerol‑3‑phosphate dehydrogenase (NAD+)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,782,9200GC10.6% 266.8 / 4.0 116G247G (GGC→GGG) gpsAglycerol‑3‑phosphate dehydrogenase (NAD+)
Reads supporting (aligned to +/- strand):  ref base G (50/51);  new base C (5/9);  total (56/60)
Fisher's exact test for biased strand distribution p-value = 4.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 116 total aligned reads displayed.

TCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAG  >  NC_000913/3782685‑3783153
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             
tCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCCACTG‑G‑TTGTCGGTACCAGTAAGCACCAAATCGccc                                                                                                                                                                                                                                            >  2:32318/1‑238 (MQ=255)
tCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GGTACGCCACCG‑G‑TTGTTGGTACCAGGAAGCACCAGATCGcc                                                                                                                                                                                                                                             >  2:1129551/1‑238 (MQ=255)
  aaTGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTGATGCGCCGA‑G‑TTGTCGGACAAGGTAAGTCCCAGATCGCCaa                                                                                                                                                                                                                                           >  2:325317/1‑238 (MQ=255)
    tgctgcCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCAACAG‑G‑TTGTCGGTGCAGGGAAGCACCAGACCGCCaacc                                                                                                                                                                                                                                         >  2:799593/1‑236 (MQ=255)
         ccTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GGTACGCCACTG‑G‑CTGTCTGACCAGCAAAGAACCAGATAGCCAAG‑cccccc                                                                                                                                                                                                                                   >  2:792386/1‑236 (MQ=255)
          cTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTCCCCCCCCCTGACCAATCTTCCCCTGCGCGCTTTGTACATCCAGGCCCGGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGAAAGCACCAGACCGCCAAG‑CCCCGCCa                                                                                                                                                                                                                                 <  1:1022941/239‑1 (MQ=255)
           tCGCGCGCGTTTTTTCCGCAATATAATCCTTGATAAATTTCCTCGTTTATGG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCCCCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCCCCAGACCGCCAAG‑CCCCGCCAt                                                                                                                                                                                                                                <  1:1447933/239‑1 (MQ=255)
           tCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAt                                                                                                                                                                                                                                <  1:840038/239‑1 (MQ=255)
           tCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGAGGCGCCAGTTCGCGGACTTCTTTCGTATGGCGGTAACCTCCCACCCCCTGACCAATCTCCTCCTGCGCGCTTTGTACACCCATGCCCTGACAGAGCATCATGCAAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGAACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCAt                                                                                                                                                                                                                                <  1:444633/239‑1 (MQ=255)
           ccgcgcgcgTTTTTCCCCCAATATAAGACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGCCCAACCTTCTCCTGCGCGCTTTGTACATCCATGCCCGGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCAt                                                                                                                                                                                                                                <  1:31216/238‑1 (MQ=255)
                          ccGCAATATAATACTTGATAAATTTCCTCGGTTTTTG‑GCATTTCAACGCCGAAGCGCTGCGCAAGTTCGCGGCCTTCTTTCGTATTGCGCTCGCTATCCACCCCATGCCCAATCTTCTCCAGCGCGCTTTGTCCTTCCATGCCCCGACCGCGCCTCATGCCAAAACGCGG‑GTTACGCGACTG‑G‑TTGTCGGTACGGGTAAGCCCCATAACGCCAAC‑CCCCGCCAT‑GCCCATAAAGGTGGc                                                                                                                                                                                                                <  1:512857/239‑1 (MQ=255)
                               ttataATACTTGAT‑AATTTTCTCGGTTTGTGTGCATTTCAACGCAGAGGCGATGCGCTAGGTCGCGGAATTCTTTCGTATTGCGGTATCCCTCCCCCCCCAGACCAATCTCCTCCTGCGCGTTTTGTACACCCGTGCCCTGACCGAGAAACAGGCAAAACCGGCG‑GTTTCGCGCATG‑G‑TTGCGGGTAGTGGTAAGCTCCAGAGCGCCAGG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGt                                                                                                                                                                                                           <  1:1297952/238‑1 (MQ=255)
                               ttaaaataCTGTATAAATTCCCCCGGTTTTTG‑CCATTTCAACCCCGAACCGATGCGCCAGTTCGCGGCCTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGCCCAACCTCCCCCTGCGCGCTTTGTCCATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTCCGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGt                                                                                                                                                                                                           <  1:1373151/235‑1 (MQ=255)
                                 ataataCTGAATAAATTTCCTCGGTTGTTG‑GCATTTCAAGGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTGCTTATTGCGGTGGCCTTCCCCCACCTGACCAATCTTCTCCTGCGCGCTTTGTACACCCAGGCCCTACCCGAGCATCAGGCAAAAACGGCG‑GTTACGGGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCg                                                                                                                                                                                                         <  1:1467852/239‑1 (MQ=255)
                                  taataCTTGATAAATTCCCTCGGTTATTG‑GCATTCCAACGCCGAAGCAATGCGCCAGTTCGCGGCCTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGc                                                                                                                                                                                                                <  1:522394/231‑1 (MQ=255)
                                     taCTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACCCGACTG‑G‑GTGTCGGGAAAGGGAAGCACCAGAAAGGCCAC‑CCCCGCCCA‑GCCCCCAAAAGGGGCAGGGtgcgca                                                                                                                                                                                                      >  1:173986/1‑233 (MQ=255)
                                        ttGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTCCAGGGCAACACCAGATCGCCCAA‑CCCCCCCCT‑GCCCCCAAACGAGGCAGGGGCGGGAccc                                                                                                                                                                                                   >  1:287821/1‑238 (MQ=255)
                                        ttGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACCG‑GTTTGTGGGT‑CAGGGAAGCACCACAACCCCCAG‑CCCCGCCCC‑GCCCCTAAAAGTGGCAGGGGCCGCCCCCa                                                                                                                                                                                                  >  1:315228/1‑239 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTCCGCGACCG‑G‑GTTTCGGTACAGGTAAAACCCAAATCGCCAAGACCCCCCCAT‑CCCCCTAAA‑GTTGCAGGGGCCGCAacccc                                                                                                                                                                                                 >  1:1498619/1‑236 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGCCCG‑G‑TTGTCGGTACACGTAAGCACCAAAACGCCCAA‑CCCCGCCCT‑GCCCCTAAAAGCGGCCAGGGCGGCACCCac                                                                                                                                                                                                 >  1:748956/1‑237 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTCCAGGTAAGCACCAGAACGCCAAG‑CCCCCCCCT‑CCCCACACAGGTGGCAGGGTCGGCACCCAgc                                                                                                                                                                                                >  2:1347860/1‑239 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAA‑CCCCGCCAT‑GCCCCTAAAGGGGGCAGGGGCGGCACCCAgc                                                                                                                                                                                                >  2:686547/1‑239 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGGACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCCT‑GCCCATAAAGGGGGCAGGGTCGGCACCCAg                                                                                                                                                                                                 >  2:1418459/1‑238 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGGACAGGGAAGCAACAGAACGCCCAG‑CCCCGCCAT‑GCCCCTAAAGGGGGCAGGGTCGGCACCCaac                                                                                                                                                                                                >  2:1152641/1‑237 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACCG‑G‑TTGTCGGTACAGGGAAGCACCAGATCGCCAAA‑CCCCCCCCT‑GCCCACACAGGTGGCAGGGGGGGCACCCac                                                                                                                                                                                                 >  1:1515312/1‑237 (MQ=255)
                                          gATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCAACCCCTGACCGAGCATCATGCCAAAACGGCG‑GCTACCAGACAT‑G‑TTGGCGGGAAACGGAAAACCCAGAACCCAAAG‑CCCCCCCCT‑ACCCCAAACAGTCGCATGGGCGGCAcccca                                                                                                                                                                                                 >  1:1632762/1‑236 (MQ=255)
                                            tAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTTCGCGACTG‑G‑TTGTTGGGACAGGTAAGCACCAGATCGCCCAA‑CCCCGCCCT‑GCCCCTAAAGGGGGGAGGGGCggggccagtc                                                                                                                                                                                                >  2:522394/1‑229 (MQ=255)
                                                    cTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGAACGCCCAG‑CCCCGCCAC‑GCCCCTAAAGGTGGGAGGGGCGGCGCCCCGCGCCGccccca                                                                                                                                                                                      >  2:420288/1‑237 (MQ=255)
                                                       ggTTGTTG‑GCCTTTCAACGCAGAAGCGACGCTCCTGTGCGCGCGCTTCTTTCGTATGGCTGTAGCCTTCCACCCCCCGACCACTTTACTCCTGCGGGTTTTGTACGTCCATGCCCTGCCCGCGCGTCATGCAAAAACGGCG‑GTTCCGCGACGG‑G‑TTGCCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGa                                                                                                                                                                                    <  1:1018646/238‑1 (MQ=255)
                                                         ttAGTG‑GCTTTTCAGCGCCGAAGCGCTGCGCCGGTTCGCGGATTTCTTTCGTATTGCGGTAGCCCTCCCCCACCACACCACTCTCCCCCTGCGCGCTTTGTCCAGCCATGCCCTGACCGACCATCATGCCAAAACGGCG‑GGTAGGCGCCTG‑G‑TTGTCGGTACAGGTAAGCACCAGACCGCCACG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAcg                                                                                                                                                                                  <  1:409913/238‑1 (MQ=255)
                                                          tATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTCCGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAcgcg                                                                                                                                                                                <  2:281463/239‑1 (MQ=255)
                                                          tATTG‑GCATTCCAACGCCGAAGCGATGCGCCAGTGCGCGGATTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGACCAATCTTCCCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGAGCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAcgcg                                                                                                                                                                                <  2:472297/239‑1 (MQ=255)
                                                                  aTTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GCTACCCCGCCA‑G‑TGGTCGGGACAAGGAAGCCCCCCATCCCCCAG‑CCCCCCCCC‑GCCCCCAAAAGAGGGAGGGGCCGCACCCCCCGCCGccccccaccgccacctct                                                                                                                                                                          >  1:937185/1‑224 (MQ=255)
                                                                     tCACCGCGGAAGCGCGGGGCCAGTTGCTGGCCTGCTTTCGTATTGCGGCAGCCTTCCACCACCGGCCCAATCTCCCCCTGCGCGCTTTGTCAATCCAGGCCCTGACCGAGCAGCATGCCAAAGCGGGG‑GTTACGCGACTG‑G‑TTTCCGGTACAGGTAGGCCCCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTcagc                                                                                                                                                                      <  1:370391/239‑1 (MQ=255)
                                                                     tCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTcagc                                                                                                                                                                      <  1:584588/239‑1 (MQ=255)
                                                                     tCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTcagc                                                                                                                                                                      <  2:550926/239‑1 (MQ=255)
                                                                      aaaggcggaggagacgcgctggTTCGCGGACTTCTTACGAATTCGGTTAGCTTCCCCCCCCCTTCACACTCTTCTCCTGCGCGCTTGTTACACCATTGCCTTGCCCTCGAATCTTGCCAAGCCGGCG‑TTTCCCCGACTG‑G‑TTCTGGTTTATGGTATGCCCCGTAGCCCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTcagc                                                                                                                                                                      <  1:1220474/217‑1 (MQ=255)
                                                                          gCCGAAGCGATGCGCCAGTTCGCGGCCTTCTTTCGTATTGCGGTAGCCTCCCACCCCCGGACCAATCTTCTCCTGCGCGCTTTGTACACCCATGCCCTGCCCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCagccagcc                                                                                                                                                                 <  2:1507788/239‑1 (MQ=255)
                                                                               aGCGATGCGCCAGTTCGCGGCCTTCTTTCGTATGGCGGTAGCCTTCCCCCACCTGACCAATCTCCTCCTGCGCGCTTTGTACATCCAGGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACgg                                                                                                                                                            <  2:941525/239‑1 (MQ=255)
                                                                                  gaggggcgcgTTCGCGACCTTCTTTCGTATGGCGGTGGCCTTCCCCCCCCTGCCAAATCTTCTCCGGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAACCGGCG‑GTTACGCGACTG‑G‑TTGCCGGTAGAGGTAAGCACCAGACCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGt                                                                                                                                                          <  1:542595/229‑1 (MQ=255)
                                                                                         gtgTTCGCGGACTTTTTTCGTAGTGCGGCAGCCTCCCACGTCCGGACCAGCCTCCCCCGGCTCACTTTGTACATCACGGCCGTCACCGGTCAAGACGCCAAACGGGGG‑TTTCCGATTCTG‑G‑TTGTCGTCACGTGAAAGCCCAAGCCCGCAACG‑CCCCGCCAT‑GCCCATAAAGGGGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAgc                                                                                                                                                   <  1:1129551/236‑1 (MQ=255)
                                                                                         cAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAgcg                                                                                                                                                  <  2:1049431/239‑1 (MQ=255)
                                                                                                      tctttctgtttgcgtgcgCCTCCCCCCGCCAGCCCAATTTTCTCCTGGCCGCTTTGTGCACCCATTCCCTGACCGATATGCACGCCAAAACGGGG‑TTTAGGCGACTG‑G‑TTGGGGGTACAGTTAAGCCCCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCAtt                                                                                                                                     <  1:107739/222‑1 (MQ=255)
                                                                                                      tcttTCGTATTGCGGTAGCCTTCCCCCCCCTGACCAATCTTCCCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCAtt                                                                                                                                     <  1:640016/239‑1 (MQ=255)
                                                                                                      tcttTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGCCCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCAtt                                                                                                                                     <  2:1368373/239‑1 (MQ=255)
                                                                                                            tttttGCGGTAGCCTTCCCCCACCTGCCCATCCTCCCCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCCCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑cc                                                                                                                              <  1:1418459/236‑1 (MQ=255)
                                                                                                            gTATTGCGGTAGCCTTCCCCCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑cc                                                                                                                              <  2:748956/239‑1 (MQ=255)
                                                                                                               ttGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACACGCCTG‑G‑GTGTTGGGTCCCGGAAGCAACAAAACGACGCC‑CCCCACCAG‑GCCCTTAACGGTGGCAGGGGCGGCACCCAGCGCCGCACCACGACGCGCCAATTCAGACAACGCACAGGGGATCAGCGCCGGAcaggccgccgaacccga                                                                                                                            >  1:631607/1‑223 (MQ=255)
                                                                                                                            ccccccccccccaattcttccCCCGCGCGTTTTGTAACTCCAGCCCCAGCCAGGCCATAAGGCAAAAGGGGGG‑TTTGCGCGACTG‑G‑TTGGCGGTCAAGGAAACCCCCAGCCCCCCACC‑CCCCGCCAT‑GCCCATAAAGGTGGCGGGGTCGGCCCCCAGCGCCGCCCCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATCCCGTCg                                                                                                              <  1:1261504/224‑1 (MQ=255)
                                                                                                                              cccaccTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGCCCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGa                                                                                                            <  2:937185/238‑1 (MQ=255)
                                                                                                                              accaccTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGa                                                                                                            <  2:369594/239‑1 (MQ=255)
                                                                                                                               ccaccTGCCCAATCTTCCCCTGCGCGCTTTGTACACCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGCCGGTACAGGTAAGCACCAGACCGCAAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGAc                                                                                                           <  2:1515312/239‑1 (MQ=255)
                                                                                                                                   cTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGCCCG‑G‑TTGTCGGTACAGGGAAGCACCAAATCGCCAAA‑CCCCGCCAT‑GCCCATAAAGGTGGGAGGGGCGGCACCCCGCCCCGCACCCAGACGCCACATTTCAGCCCGCCCCCCGGGGGACAGCGCCCGACGCCGCTTCGCC‑CCCAAAcacaaaaccgcggccatc                                                                                                        >  1:1580676/1‑221 (MQ=255)
                                                                                                                                      aCCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGGCTG‑G‑TTGTCGGGACAGGGAAAGACCAAAACGCCCAG‑CCCCGCCCC‑GCCCATAAAGGGGGGCGGGGCGGGACCCAGCGCCCCACCAACACGCGACCTTTTAGCCCCCCCACGGGGGAGCAGCGCGGGGACCGCCTTCGCC‑CCCAAACCACCACCGCCGGACACcccc                                                                                                     >  1:811197/1‑238 (MQ=255)
                                                                                                                                      aCCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGCCTG‑G‑TTGTCGGTACAGGGAAGCACCAAATCGCCAAA‑CCCCCCCCT‑GCCCATAAAGGGGGGAGGGGCGGCACCCCCCGCCCCCCCCAGACACCACCTTTCAGCCAGCCCACCGGGGCTCAGCCCCGCACGCGCATTCCCC‑CCACAAccccgaccccccgccaacccc                                                                                                     >  1:823483/1‑219 (MQ=255)
                                                                                                                                          aTCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACGG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCAcc                                                                                                <  2:741261/239‑1 (MQ=255)
                                                                                                                                             ttctCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGTCTG‑T‑TTGTCGGTACAGGTAAGCACCAGATCGCCAGG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAAt                                                                                             <  2:183412/239‑1 (MQ=255)
                                                                                                                                                tcCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGCCTG‑G‑TTGTCGGTACAGGTAAGCACCACATCGCCAAA‑CCCCCCCAT‑GCCCCTAAAGATGGCAGGGTCGGGACCCAGCGCCGCCCCACAACGCGACATTTCAGCCAGCCCCCGGGCGATCAGCGCCGTACGCGCCTTCGCC‑CCAACACCCATCCCCCCGGACATACCCCCCCCCATGGc                                                                                          >  1:1189962/1‑239 (MQ=255)
                                                                                                                                                tcCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACCCGACTG‑G‑TTGTCGGGAACGGGAAGCACCAGAACGCCCAG‑CCCCCCCCTCCCCCCTAAAGG‑GGCACGGGCGGCAACCAGCCCCCCCCCCCAACGCGCCCTTTCCACCCGCCCACGGGGGAGCACCGCCGGAAGGGCCTTCGGC‑CCACAACCCACACCCGCGGACACCCCCGcccccaagg                                                                                           >  1:90172/1‑233 (MQ=255)
                                                                                                                                                  cTGCGCGTTTTGTGCACCCACGCCCTGCCCGAGCAACATCCCAAAGCGGCG‑GTTACCCGCGTGTG‑TTG‑CGGTACAGGTAAGCACCAGACCCCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCaa                                                                                        <  1:1261648/239‑1 (MQ=255)
                                                                                                                                                     ctgtgttagaacctccgggCCATGACCGAGCA‑CAAACCCAAACCGCGTGTTCGGCGAGTG‑G‑TTGCGGGTACAGGTAAGCACCAGACCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCCCCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑a                                                                                     <  1:956769/220‑1 (MQ=255)
                                                                                                                                                     cgcgcTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTTCCCGACTG‑G‑TTGTCGGTACAGGGAAGCCCCACAACGCCAAG‑CCCCCCCAT‑GCCCCTAAAGGGGGCAGGGGCGGCCCCCCCCGCCGCCCCCAAACGCGACACTTCAGCCCGCCCCCCGGTGATCAGCGCCCTACGCGCCTTCCCC‑CCCAAACCCACACCGTCCGACAACCCCGcccccaccgcaacca                                                                                     >  1:1296824/1‑228 (MQ=255)
                                                                                                                                                          tttGTACATCCATGCCCTGACCGGGCATCATGCCAAAACGGCG‑GTTCCGCGACTG‑G‑TTGTCGGTACAGGTAACCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGa                                                                                                                      <  2:1367048/201‑1 (MQ=255)
                                                                                                                                                            tGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGc                                                                                                                                                                                                                <  2:1098249/110‑1 (MQ=255)
                                                                                                                                                                 ctCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑TTTCCGCTACTG‑G‑TTGTCGGTACAGGTAACCACCAGACCGCCAGG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACcg                                                                        <  2:1210267/238‑1 (MQ=255)
                                                                                                                                                                  tCCAGGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACcgc                                                                       <  2:7026/239‑1 (MQ=255)
                                                                                                                                                                    cATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTAAAGGTAAGCACCAAAACGCCAAG‑CCCCGCCCC‑GCCCCTAAAAGTGGCAGGGTCGGCACCCCGCGCCCCCCCCAAACGCCACCTTTCAACCCGCCCCCCGGGGAGCCGCGCCGCACGCCCCTTCGCA‑CCAAAAACCACACCCCCGGCCCTCCCCCCCCCCACGGCAAA‑CAAGCTTTTCaacacc                                                                      >  1:1290639/1‑233 (MQ=255)
                                                                                                                                                                      tGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTTCGCGACTG‑G‑GTTTCGGCACAGAGAAAAACCAAAACGCCAAA‑CCCCCCCCT‑TCCCATAAAGGGGGCCAGGGCGGCACCCCCCGCCGCCCCCAAACGCGCCATTTTAGCCCCCCCCCGGGGGGTTCACGCCGCAAGCGCATTCGCACCCAAAACCGCCA‑CGCCGGACACCCCCCCCCCCACGGCCCA‑AACCGTTTTCACCCcgcc                                                                    >  1:1306131/1‑238 (MQ=255)
                                                                                                                                                                      tGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTTCCCGACTG‑G‑GTGTCGGGACAGGGAAGCCCCAAAACGCCCAG‑CCCCGCCCT‑GCCCACAAAGGTGGGAGGGGGGGCACCCCGCGCCGCACCCAGACGCGACATTTCAGTCCGCCCACGCGTGACCAGCGCCCTACGCGCAGTCGCC‑CCAAAAACGAAAACCGCGGAAACCCCCCCACCACCTGCAATAAACGttttcaaccccac                                                                     >  1:940292/1‑229 (MQ=255)
                                                                                                                                                                           ggACCGGGCATCAGGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCCCCAGACCCCCCAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAg                                                              <  1:686547/238‑1 (MQ=255)
                                                                                                                                                                             aCCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑GTGTCGGTACAGGGAAGCCACAAAACGCCAAA‑CCCCCCCAC‑GCCCATAAAGGGGGCAGGGGCGGCACCCCGCGCCCCCCCCAGACCCCACATTTCCGCCAGCCCCCCGGGGATCAGCGCCCCACCCCCACTCCCA‑CCAAAACCGCAACCCCCGGCACTCCCCCCACCCATGGCCAA‑AAAGCTTTTCACCCCCCCCCCaaca                                                             >  1:422204/1‑236 (MQ=255)
                                                                                                                                                                              ccaggCATCAGCCAAAAACGGCG‑GTTCCGCGACTG‑T‑TTGTCGGTACGGGAAAGCCCCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTg                                                           <  2:1433297/235‑1 (MQ=255)
                                                                                                                                                                                gggCATCAGGCCAAAACGGCG‑GTTACGTGACTG‑G‑TTGCCGGTACAGGAAAGCACCAGACCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCa                                                         <  2:1306131/237‑1 (MQ=255)
                                                                                                                                                                                    atcagGCCAAGACGGCG‑TTTACGCGACTG‑G‑TAGTCGCTAGAGGTAAGCACCACGTCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGACCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACAGCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGc                                                      <  1:1544992/238‑1 (MQ=255)
                                                                                                                                                                                    ataatGCCAAACCGGGG‑GTTCCGCGCCTG‑T‑TTGCCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGc                                                      <  2:91101/235‑1 (MQ=255)
                                                                                                                                                                                    accatGCCAAAAGGGCG‑GTGACGCGCCGG‑G‑TTGTCGTTACGGGTAAGCACCAGACCGCCAGG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACg                                                       <  2:1287826/235‑1 (MQ=255)
                                                                                                                                                                                     caagcccAAACCGGCG‑TGTCCCCGACTG‑G‑TGGCGGGTACAGGAAGCCACCAGACCGCAAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCa                                                    <  1:698291/234‑1 (MQ=255)
                                                                                                                                                                                            aaaaCGGCG‑GTTACGCGAGTG‑G‑TTGTCGGTCAGGGAAAGCCCCAGATCGCAAAG‑CCCCGCCAT‑GCCCAGAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAAt                                             <  2:1350017/239‑1 (MQ=255)
                                                                                                                                                                                                  gcg‑gTTCCGCGACTG‑G‑TTGGCGGTACAGGTAAGCACCAGACCGCCAAC‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGa                                        <  1:1614182/238‑1 (MQ=255)
                                                                                                                                                                                                          cgcgCCTG‑G‑TGGCCGGTACAGTTAAGCCCCAGACCCACAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTa                                <  2:388431/239‑1 (MQ=255)
                                                                                                                                                                                                                            tACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACtttt                 >  2:8953/1‑238 (MQ=255)
                                                                                                                                                                                                                              cAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGcc              >  2:1221127/1‑239 (MQ=255)
                                                                                                                                                                                                                               aGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAcgcg                                                                                                                                                                                >  2:833833/1‑78 (MQ=255)
                                                                                                                                                                                                                               aGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAcgcg                                                                                                                                                                                <  1:833833/78‑1 (MQ=255)
                                                                                                                                                                                                                                 gTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCa           >  2:293689/1‑239 (MQ=255)
                                                                                                                                                                                                                                 gTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCACTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACAAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTACACGCGGCAACTTTTGccccc           >  1:254815/1‑236 (MQ=255)
                                                                                                                                                                                                                                    aGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGt         >  2:1087891/1‑238 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCACT‑CACGTTTTTCACCGCGCCGCCAAGCTGCCCGCCCATGACATCCGGATTGCTGTAAACTCGGAACCTTTTGCCGCAGTgc       >  1:552120/1‑238 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  2:946404/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  2:1223339/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  2:1250502/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  2:1502381/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  1:767670/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  2:251632/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  1:1548081/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca      >  1:220604/1‑239 (MQ=255)
                                                                                                                                                                                                                                        ccAGACCCCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagc    <  2:552120/239‑1 (MQ=255)
                                                                                                                                                                                                                                         cggaacGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGGTGGCACCCATCGCCGCACCAAGACGCGACATTTCAGCCAGCCCGCGGGTGATCACCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAACCGCGGAAACTTTTGCCGCAGTgcagca   <  1:1223339/234‑1 (MQ=255)
                                                                                                                                                                                                                                           gATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCg             <  2:1526707/227‑1 (MQ=255)
                                                                                                                                                                                                                                           gATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGcagcag  >  1:242123/1‑238 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             
TCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTG‑GCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCG‑GTTACGCGACTG‑G‑TTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCAT‑GCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCA‑CCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAAT‑AACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAG  >  NC_000913/3782685‑3783153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A