Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F27 I0 R1
|
120 |
139.6 |
2835800 |
98.5% |
2793263 |
226.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,782,920 |
G→C |
14.2% |
G247G (GGC→GGG) |
gpsA ← |
glycerol‑3‑phosphate dehydrogenase (NAD+) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,782,920 | 0 | G | C | 14.2%
| 201.1
/ 6.8
| 105 | G247G (GGC→GGG) | gpsA | glycerol‑3‑phosphate dehydrogenase (NAD+) |
| Reads supporting (aligned to +/- strand): ref base G (39/50); new base C (10/6); total (49/56) |
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 106 total aligned reads displayed.
TCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGC > NC_000913/3782685‑3783154
|
tCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGAGACTGGTTGTCGGTACAGGTAAGCACCAGAACGccc > 2:963021/1‑238 (MQ=255)
tCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑GTACCCGGCCGGTTGTCGGTACCGGTAAGCACCAAAACGccc > 2:979578/1‑238 (MQ=255)
tgctgcCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAACCGGCGG‑TTACGCGACTGGTTGTTGGTACAGGTAAGCACCAAATACCC‑aacc > 1:1284619/1‑236 (MQ=255)
tgctgcCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGGTTTCGGTACAGGGAAGGCCCAAAACGCC‑CAGc > 2:424139/1‑238 (MQ=255)
ccTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTAAGCCACTGGTTGTCGGTGCCGGGAAGCACCAGAACGCC‑AAGCCCCGc > 1:118653/1‑238 (MQ=255)
cTCGCGCTCGTTTTTTCCGCAATATAATACTTGATAATGTTCCTCTGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGCCTTCTTTCGTATTGCGGTCGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACGGGTAAGCACCAGATCGCA‑AAGCCCCGCCa < 2:34697/239‑1 (MQ=255)
ccgcgcgcgTTTTTTCCGAAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAGGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACACCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCAt < 2:1253600/238‑1 (MQ=255)
ccGAAATATAATCCTTAATAAATTTCCCCGGTTATGGCCTTTTCAACGCCGAAGGGATGCGCCGTTTCGCGGATTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGCCCAATCTCCTCCTGCGCCCTTTGTACATCCATCCCCTGACCGAGCATCATGCAAAAACGGCGG‑TTCCGCGCCTGGTTGTCGGTACAGGTAAGCCCCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGc < 2:1378922/239‑1 (MQ=255)
aaTATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAACCGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATa < 1:1016856/227‑1 (MQ=255)
tataATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCCCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCCCCTGACCAAACTTCTCCGGCGCTCTTTGTACATCCATGCCCTGACCGAGCATCAGGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCAt < 1:1389937/218‑1 (MQ=255)
taCTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACCCGCCTGGGTGTCGGGGCAGGTAAGCACCAAAACGCCAAACCCCCGCCA‑GCCCCCCAAGGGGGCAGGggcggcc > 2:1152983/1‑237 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCATCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTTACACACCGGGTTTTGGGCAC‑GGTAAGCACCAAATCCCC‑AAACCCCCCCCCGCCCATAAAAAGGGCAgggggagcgcccca > 2:248159/1‑227 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCTTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGCCTGGGTGTCGGGACAGGTAAGCACCCAAACCCC‑CAACCCCCCCCCGCCCACAAAAGTGGCAGGGGCGGCAccccc > 2:1204478/1‑236 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTTACAC‑CCTGGTTTTCTGTACAAGTAAGCACCAAAAAGGC‑CAACCCCCCCACACCCATaaaagctgtctctttaacacaactc > 2:1389937/1‑217 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCTCCTGGTTGTCGGTACAGGGAAGAACCAGATCCCC‑AAAACCCCCCCCGCCCCTAAAAGGGGCAGGGTCGGGACCCac > 1:39806/1‑237 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGCATGGTTGTCGGGACAGGGAAACACCAGAACCCC‑AAACCCCGCCATGCCCATAAAGGTGGCAGGGGCGGCAccccc > 1:1135680/1‑236 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTGCAGGTAAGCACCAAAAAGCC‑AAGCCCCGCCCTGCCCCTAAAAGGGGGAGGGGCGGGAccccg > 2:487356/1‑236 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGGACAGGGAAACAACAAAACGCC‑AAACCCCCCCCATCCCCTAAAGGTGGCCAGGGCGGCAACCac > 1:1409045/1‑237 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGGTTTCGGGACAGGGAAGCACCAAAACCCC‑CAACCCCCCCCTTCCCCTAAAGGGGGCAGGGGCgggcccccc > 2:769259/1‑231 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACCGGTTTTCGGTACAGGTAAGCACCAGATCGCC‑AAACCCCCCCATGCCCCTAAAAGTGGCAGGGTCGGCACCCAg > 1:203874/1‑238 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCCGCCGGTTTTCGGTACAGGTAAGCACCAGAACGCC‑CACCCCCGCCCTGCCCCTAAAGGTGGCAGGGGCGGCACCCCgc > 2:378119/1‑239 (MQ=255)
gATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTAAGCGCCCGGTTGTCGGTACAAGTAAAACCCACAACCCC‑CAACCCCCCCCTTCCCCTAAAGAGGGCCGGGGCGGCAccccg > 2:1067617/1‑236 (MQ=255)
tAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTTCGCGCCTGGTTGTCGGTACAGGGAAGCACCAAATCCCC‑AAGCCCCGCCCTTCCCATAAAGGGGGCAGGGTCGGCACCCAgcc > 1:932088/1‑237 (MQ=255)
cGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGa < 1:938984/239‑1 (MQ=255)
ttATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCACCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑cg < 1:419490/238‑1 (MQ=255)
tATTGGCATTTCAACGCCGGGGCGTTGCGCCGTTTCGCGTTCTTTTTTCGTATTGCGGTAGCCTCCCACCCCCGGGCCAATCTTCTCCGGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCAGGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑cgcg < 2:966754/239‑1 (MQ=255)
tATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTCCGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑cgcg < 1:310616/239‑1 (MQ=255)
ttCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCCCCTGACCAATCGTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCAt < 1:85238/183‑1 (MQ=255)
ttCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGGAAGCACCAAATCGCC‑CAGCCCCCCCATGCCCCTAAAAGTGGCAGGGGCGGCACCCAGCCCCGCACCAAAA‑CGCGACATTTc‑a > 2:581323/1‑238 (MQ=255)
ttCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTCTCGGTACAGGGAAGCACCAGATCGCC‑CAACCCCGCCATGCCCATAAAGGTGGCAGGGTCCGCACCCAGCGCCCCACCaaacaccgacaattct > 1:1330029/1‑224 (MQ=255)
ttCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGGTGTCGGGACAGGTAAGCACCAAAACGGC‑AAGCCCCCCCAAGCCCCTAAAGGGGGCAGGGGCGGCACCCCGCGCCCCACCCAGA‑CGCGACAATTc‑a > 1:1217021/1‑238 (MQ=255)
ttCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCCACCGGTTGTCGGGACAAGGAAGCACCAAATCCCC‑CAGCCCCCCCCTGCCCCTAAAAGTGGCCGGGTCGGCACCCAGCGCCGCCCCAAGA‑CGCGACATTTcc > 2:725121/1‑237 (MQ=255)
tCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTCCCACCCCCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTc‑agc < 1:424139/239‑1 (MQ=255)
gcAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCCCCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTc‑agc < 1:487356/238‑1 (MQ=255)
caaaCGCGGAAGCGATGCGCCAGTTCGCGGCCTTTTTTCGTATTGCGGTCGCCTTCCACCCCCTGACAAATCTTCCCCTGCGCGCTTTGTACTTCCATGCCCGGACCGAGCATCATTCCAAAACGGCGG‑TTACGCGCCTGGTTGTCGGTAAAGGTAAGCACCAGATCGCC‑AGGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTc‑agc < 2:1015847/237‑1 (MQ=255)
cGAAGCGATGCGCAGGTGCGCGGTCTTCTTTCGTATTGCGGTAGCCTCCCCCCACCTTCCCAACCTTCCCCGCCGCGCTTTGTACATCCATGCCCTAGCCGGGACTCAGGCCAAACCGGCGT‑TTACGCGATTGTTTTTCGGTACAGGTAACCCCCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCa < 2:118653/239‑1 (MQ=255)
gAAGCGATGCGCCCGTTCGCGGCCTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGACCAATCTTCCCCTGCGCGTTTTGTACATCCATGCCCTGCCCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCCCCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCAc < 2:932088/239‑1 (MQ=255)
aaGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACCCGACTGGGTTTCGGGACAGGCAAGGACCCGACCGCC‑AAGCCCCGCCCTGCCCCTacaa > 2:85238/1‑180 (MQ=255)
aGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACgg < 1:63073/239‑1 (MQ=255)
gcCAGTCCGCGGTCTTTTTTCGTATTGCGGTTGCTTCCCCCCACCGTACCAACCTTCTCCGCGGCGCTTTGTACAGCCATGCCCTGACCGAGCATCATGCAAAAACGGCGG‑TTACGCGCGTGGTTGTCGGTACAGGAAAGCACCAGACCGCC‑AGGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAg < 2:1217021/239‑1 (MQ=255)
cagtcgccgGTCTTTTTTCGTATGGCGGTACCCTTCCACCCCCTGACCAATCTTCTCCTGCGCGTTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGTTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAgcg < 2:451949/232‑1 (MQ=255)
cgcgGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGGTGTCGGTACAGGTAAGCACCAGATCGCC‑AAACCCCGCCACGCCCCTAAAGGCGGCAGGGGCGGCACCCCCCGCCGCCCCCAGA‑CCCCACATTTC‑AGCCAGCCCACGCGTGGTCAGCGCCgc > 2:463937/1‑237 (MQ=255)
gTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCCCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAcc < 1:248159/239‑1 (MQ=255)
tATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACCGGGTTTCGGGTCAGGGAAGGCCCAGAACGCC‑CAAACCCCCCACGCCCCTAAAAGGGGGAGGGGCGGCACCCCGCCCCGACCCCCAA‑CCCGGAATTTT‑AGCCACGCCACAGGGGGTCAGCGcccccagcgccctcgcccca > 2:910755/1‑221 (MQ=255)
ttGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGGCTTGTTGTCGGGACAGGTAAGCACCAGAACGCC‑AAGCCCCGCCCTGCCCATAAAAGTGGCAGGGGCGGCCCCCAGCGCCGCCCCAAGACCGCG‑CATTTC‑AGCCCGCCCCCCGGGGCACAGCGCCGTACGCGCGTTCGCCCCaca > 2:464782/1‑237 (MQ=255)
ttGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCaaa < 1:102266/239‑1 (MQ=255)
gCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACCCGACCGGTTGTTGGTGCAGGGAAACACCAGAACGCC‑CAACCCCCCCCTGCCCCTAAAGGTGGCAGGGGCGGCACCCACCCCCGCCCCCAGA‑CGCCACATTTC‑CCCCAGCCCCCCGGGGAGCCGCGCCGCACGCGCACTCGCCCCaaaa > 2:646801/1‑238 (MQ=255)
tacccTTCCACCCCCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGa < 1:769259/235‑1 (MQ=255)
tAGCCTTCCCCCACCTGACCAATCTTCCCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAACCGGCGG‑TTCCGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGa < 1:988602/238‑1 (MQ=255)
cccaccTGACAAATCTCCTCCTGCGCGCTTGGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑a < 1:378119/238‑1 (MQ=255)
ccacccTGACAAATCTTCTCCTGCGCGCTTTGTCCACCCATGCCCGGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGCCGGTACAGGTAGGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑a < 1:774673/235‑1 (MQ=255)
acccccGGACCAATCTTCTCCTGCGGGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑a < 1:421624/239‑1 (MQ=255)
accaccTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCAAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑a < 1:1204478/239‑1 (MQ=255)
ccaccTGACAAATCTTCCCCTGCGCGCTTTGTACACCCATGCCCTGCCCGAGCAGCATGCCAAACCGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑Ac < 2:203874/239‑1 (MQ=255)
tgcccAATCTTCCCCTGCGCGCTTTGTACACCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATccc < 1:939665/236‑1 (MQ=255)
tgcccAATCTCCCCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGCCTGGTTGCCGGTACAGGTAAGCCCCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATccc < 1:963021/236‑1 (MQ=255)
caCCAATCTTCTCCGCCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGCCTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATcccc < 2:224797/238‑1 (MQ=255)
ccccTGCGCGCTTTGTACATCCATGCCCTGACGGAGCATCAGGCCAAACCGGCGG‑TTCCGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATgg < 1:725121/237‑1 (MQ=255)
cgcgcTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGGCTGGTTGTGGGGTAAGGTAAAGCCCAGATAGCC‑AAACCCCCCCCTGCCCATAAAAGTGGGAGGGTAGGCCCCCCCCCCCGCCCCCAGA‑AGCGGCAATTT‑AGCCCCCCCACGCGTGAGCAGCCCCCGACCCCCTTTCCGACCCCAACCGCTACCACCGG‑CCACACCCGCACC‑AACGGCACTa > 2:910190/1‑238 (MQ=255)
tCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTTACCCACCGGTTGTCGGTACAGGGAAGCACCAAAACGCC‑CAGCCCCGCCCCCCCCCTAAAGGCGGCAGGGGCGGCACCCCCCGCCGCCCCACAA‑AGCGCCACTTCAACCCACCCCACGGGGGA‑CAGCGCCCCACCCGCACTCGCCCCAAACACCATAACGTCCG‑CCACCCCCCCCAC‑CACCGCAAAA‑AACTTTTTCAccc > 2:251512/1‑237 (MQ=255)
ccAGGCCCTGACCGAGCATCAGGCCAAAACGGCGG‑TTACGCGACTGGTTGCCGGTCCAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATGCCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACcgcg < 1:646801/239‑1 (MQ=255)
tGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAAAACGCC‑CAGCCCCGCCATGCCCATACAGGCGGCAGGGGCGGCACCCAGCGCCGCCCCCAGA‑CGCGGCATTTC‑AGCCAGCCCACGGGGGGTCAGCGCCGCACGCGCATTCGCCCCAAAACCGATACCGCCGG‑ACAACCCCCCCCC‑CACACCAATA‑ACGATTTTCACCGcgcc > 2:1386684/1‑238 (MQ=255)
tGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACCCGACTGGGTGTCGGGAAAGGTAAACACCAAAACGCC‑AAACCCCGCCCTTCCCCAAAAAGGGGGAGGGGCGGGACCCAGCGCCGCACCCCGA‑CGCCACAATTC‑AGCCAGCCCACGGGGGGTCAGCGCCGTACCTGCCTTCTCACCAAAAACCATACCCTCGG‑ACAACCCCCCACC‑ACTGGCACTa‑aaactttttaacgcccc > 2:666231/1‑222 (MQ=255)
gCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAgcgc < 2:1098848/117‑1 (MQ=255)
ccccTGCCCGACCATCATCCAAAACCGGCGT‑TTCCGCGACTGTGTGGCGGTACGGCTAAGCACCAGATCCCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGcgccg < 2:1284619/237‑1 (MQ=255)
aCCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTTTCGGGACAGGGAAACAACAAATCGCC‑AAGCCCCCCCAAGCCCCTAAAAGGGGGAGGGGCGGCACCCCCCGCCGCACCCAGA‑CCCGCCAATTC‑AGCCAGCCCACCGGGGATCAGCGCCGCACGCCCACTCCCACCCAAACCGACACCCTCGG‑ACAACCCCCCACC‑ACAGGCAATA‑ACGATTTTCACCGCGCCGCCGAGc > 2:776819/1‑238 (MQ=255)
aCCGAGCATCATGCCAAAACGGCGG‑GTACGCGACTGGTTGTCGGTACAGGTAAGCACCAAATCGCC‑AAACCCCCCCCAGCCCCAAAAAGAGGCAGGGGCGGACCCCCGCGCCCCCCCAAGA‑CGCGACAATTT‑ACCCAGCCCACCGGGGAGCCGCCCCCTACACCCCCTCCCACCCAAACCGATAACGGCGGCACA‑CCCCGCACCAAACGGCAACACACGTTTTCCCCCGccccccaac > 2:696631/1‑233 (MQ=255)
ccgaccagagtGCAAAAAGGGCGG‑TTACGCGACTGGTGGCGGGAACAGGAAACCACCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTg < 2:39806/229‑1 (MQ=255)
ccGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGCCGGTACAGGTAAGCCCCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTg < 1:1152983/239‑1 (MQ=255)
ccGAGCATCATACCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACGGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTg < 1:50866/239‑1 (MQ=255)
ccGACCATCATGCAAAAACGGCGG‑TAACGCGACGGTTTGTCGGTAAAGGTAAGCACCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTg < 1:910190/239‑1 (MQ=255)
aGCATCATGCCAAAACGGCGG‑TTACGCGACTGGGTGTCGGGACAGGGAAGCACCAGATCGCC‑AAACCCCGCCATGCCCATAAAGGGGGCAGGGGCGGCACCCAGCGCCGCAcccaaa > 1:1098848/1‑113 (MQ=255)
atcagGCCAAACCGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGc < 1:954834/238‑1 (MQ=255)
atGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGGACACGTAAGCAACAAAACCCC‑AAACCCCGCCATGCCCATAAAAGTGGGAGGGGTGGCACCCAGCGCCGCCCCAAAA‑ACCGACATTTT‑AGCCCCCCCCCCGGGGAAAAGCGCCGCACCCGTCTTCGCACCAAAACCGGTACCGTCCG‑ACATCCCCCCCCC‑AACGGCCATA‑ACGGTTTTCACCCCcccgcccacactcaccccaac > 2:799458/1‑224 (MQ=255)
tGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGGACAGGGAAGCACCAAATCGCC‑CAGCCCCGCCATGCCCATAAAGGGGGCAGGGGCGGCACCCCGCACCGCACCAAAA‑CGCGACATTTC‑AACCAGCCCCCGGGGGATCAGCGCCGCACGCGCATTCCCACCAAAACCGATACCGGCGG‑ACAACCCCCCACC‑CACGGACAAA‑ACGCTTTTTACCCCgccgccccactccacccccaag > 2:956506/1‑223 (MQ=255)
aaacCGGCGG‑TTCCGCGCCTGGTTGCCGGTACAGGTAAGCCCCAGCTCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAAt < 1:955100/239‑1 (MQ=255)
gcgg‑TTACGCGACTGGTCGTCGGTACAGGTAAGCACCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGa < 1:696631/238‑1 (MQ=255)
ggg‑TTACGCCCCTGGTTGTCGGTACAGGTAAGCACCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGAt < 1:1386684/237‑1 (MQ=255)
cgg‑TTACGCGACTGGTTGTCGGGACAGGGAAGCACCAAAACGCC‑AAGCCCCGCCATGCCCATAAAGGGGGCCGGGGCGGCACCCAGCGCCGCCCCCAAA‑CGCCACATTTC‑AGCCAGCCCACGGGGGATCAGCGCCGGACGCGCATTCGCACCAAAAACGAAACCGCCGG‑ACATCCCCGCACC‑AAAGGCAATA‑ACGTTTTTCACCCCCCCCCCCAACCGCACGCCAATCGAAACCGGGAt > 2:342987/1‑239 (MQ=255)
cgcgACTGGTTGGCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTa < 1:334791/239‑1 (MQ=255)
aCTGGTTGTCGGTACAGGTAAGCACCAGACCCCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑Gatctccagcagctgctgcac < 1:463937/238‑20 (MQ=255)
tgtttGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAAcgcg < 1:666231/236‑1 (MQ=255)
ggTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCgg < 1:563182/239‑1 (MQ=255)
aCAGGGACGCCCCAGACCCCC‑AAGCCCCGCCAGGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGc < 2:1108464/239‑1 (MQ=255)
cAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGCGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AAAGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAACATTTTGcc > 2:225571/1‑239 (MQ=255)
gTAAGCCCCAGACCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGc < 1:559307/238‑1 (MQ=255)
gTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATaa < 2:273188/37‑1 (MQ=255)
caaGCTCCAGCCCGCA‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCg < 1:994600/235‑1 (MQ=255)
caccacACCCCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca < 2:1135680/239‑1 (MQ=255)
cACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGTCACCCCACGGGGGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCCCGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTga > 2:897295/1‑237 (MQ=255)
cACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCCGTgca > 1:1109619/1‑239 (MQ=255)
cACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca > 1:1195779/1‑239 (MQ=255)
cACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCAACCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca > 1:368926/1‑239 (MQ=255)
cccAGATCCCC‑ACGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgca < 1:1067617/237‑1 (MQ=255)
cccgacagCC‑ATGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagc < 1:494667/232‑1 (MQ=255)
cAGACCCCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagca < 1:799458/239‑1 (MQ=255)
gATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAgg > 1:273188/1‑37 (MQ=255)
gATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagcacc > 2:893916/1‑237 (MQ=255)
gATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagca > 2:1152932/1‑237 (MQ=255)
gATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagca > 1:509444/1‑237 (MQ=255)
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TCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGG‑TTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCC‑AAGCCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGA‑CGCGACATTTC‑AGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGG‑ACATCCCCGCACC‑AATGGCAATA‑ACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAAT‑GAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGC > NC_000913/3782685‑3783154
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
