Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F17 I0 R1
|
124 |
155.2 |
3079696 |
98.3% |
3027341 |
226.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,672 |
G→A |
14.7% |
pseudogene (931/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,672 | 0 | G | A | 14.7%
| 186.1
/ 9.4
| 123 | pseudogene (931/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base G (50/50); new base A (12/5); total (64/59) |
| Fisher's exact test for biased strand distribution p-value = 1.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 123 total aligned reads displayed.
TATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGAAGTGGT > NC_000913/3862450‑3862908
|
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCCTGGC‑GGGT‑ATGAGTTC‑GGGGATCAG‑C‑AAG‑CCCC‑CCCCtttt > 2:78860/1‑239 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCAATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGCGGGGAATCGG‑C‑‑AG‑CCCG‑CCCCtttt > 1:19243/1‑239 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGGAATTCCCACCAGCATGGC‑GGGT‑AAGGTTTC‑CGGGATAAGAC‑CAG‑CCCC‑CCACtttaccc > 2:47266/1‑234 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGGAACAG‑C‑CAA‑CCCG‑CCCCCTTTAcacca > 2:681248/1‑235 (MQ=255)
tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGCT‑TAGGTTGC‑GGGGAAAAA‑C‑AAA‑ACCC‑CCACtttttaccagat > 2:1244330/1‑231 (MQ=255)
aactccGGGATCCAGTTTGGCGACAAACCTAATTCATACAGCCCCCCGCCTGTGTCGCCCCCCACAC‑AAAAGAAATAC‑ATTAGGGC‑AGATATGGGGGCGGCCA‑GCAGGGCGTGTCCCGAAAACAGCAAGGGTGAAATAAAAAGGAAGGTAAATT‑CCAGCGGTTCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AGGGTTGG‑GGGAATCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTg < 2:1411730/233‑1 (MQ=255)
ggATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTTC‑GGGGATCAG‑C‑AAA‑CCCG‑CCCCCTTTACCCCCTTTTCCGGTGCGGGAggg > 1:1291131/1‑237 (MQ=255)
tCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAG‑C‑AAG‑CCCC‑CCACCTTTACCCCATTTTTCGGAGCGGCAGGG‑AAg > 1:1011466/1‑239 (MQ=255)
tCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAA‑C‑CAA‑GCCG‑CCACCTTTACCCCACTTTTCGGGGCGGCAggggag > 1:667023/1‑234 (MQ=255)
cAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGTTGC‑GGGGATCAG‑C‑AAG‑GCCGCCCACTTTT‑CCCGATTTTCCCGTGCGCGTGTG‑AAgg > 1:594638/1‑237 (MQ=255)
tgttcggCGTTAAAACTGAGACACTCCCACCTCCGCCCA‑GTTTCCCCCCCCAC‑CAAA‑AGAGACAATTGCCGTCCGCAATTGAGCCCGCCC‑GCAGCGCGTATCCCCCAAACAGCCGGGGTGAATGGAAGAGGAGGGTAATTT‑CCAGTGTTTCGGTAATCCCCGCCACGATGGC‑GTTT‑AAGGTGGG‑GGAAATCAG‑C‑AGG‑CCCG‑CCTCTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTAc < 2:406913/233‑1 (MQ=255)
ttggCGATAAAACCAAGCCAATCACCCCCCCGCCCATTTTCCCCACCCCAC‑AAAAGAAATAC‑ATTGCGGC‑CGACATGGAGGCCGCCA‑GCACGGCGGGCCCCGCAAACACCAACGGAAAAATGAAGAGGAAGGTAAATC‑CCAGGGGTTCGGTAATCCCCACCAGCATGGG‑GGTT‑AAGGTGGC‑GGAAATCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTAc < 2:966540/233‑1 (MQ=255)
tGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTTGC‑GGTAA‑CAGAA‑AAC‑CCCG‑CCCCTTTTCCCCCATTTTCCGGTG‑GGCAGGG‑AAGTaaaac > 1:221811/1‑233 (MQ=255)
gtaaaaaCCTAGACAATCAAGCCCCCCCCATTGTCGCCC‑CCACACACAAAGAGATAC‑ATAACGGC‑AGACA‑TGGGGCCCCCACGCCCGGGGTGTCCCACAAACAGCAACGGTAAAATGAACAGGAAGAAAATTC‑CCGGGGGTTCGTTAATCCCCACCGGCGTGGG‑GTTT‑AGGGTGGC‑GGGAACAAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑a < 2:1011466/235‑1 (MQ=255)
aaccctaacaaaTCAGCCCCCCCCCCATGTTGCCCACCACAC‑CAAAGAAATAC‑ATTCCGGT‑CGAAATGGAGCCCGCCA‑GCAGGGCGTTTCCCGCAAACAGCACGGGTGAAATGAACAGGAAGGTAAATT‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGG‑GGTT‑AGGGTGGC‑GGAAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGaa < 2:319263/229‑1 (MQ=255)
caaaccAGCCCTCCGCCCATGTCCCCCACCACAC‑AAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTCCCGCAAACAGCAACGGTAAAAGGAACAGGAAGGTAAATT‑CCAGGGGTTCGGTAATCCCCCCCAGCATGGC‑GGTT‑AAGGTGGC‑GGGAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCAc < 1:580630/234‑1 (MQ=255)
aaTCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑A‑CAA‑CCCG‑CCCCTTTTTCCCGATTTTTCGGCGCGGCCGGG‑CAGAACATAG‑CT‑Aaaaaaaagaccccc > 1:1031946/1‑230 (MQ=255)
cGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGAATCAG‑C‑AAG‑CCCC‑CCACTTTTTCCCCCTTTTCCGGTGCGGCAGTG‑AAGGACATCG‑CT‑AAAGAAAAA‑CCCCCCGCC‑CCaaaaaat > 2:676895/1‑235 (MQ=255)
cGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGAATCAG‑C‑AAA‑CCCG‑CCACTTTTACCCGCTTTTTCGGGGCGGCAGGG‑AAGTACATCG‑CC‑AAAGAAAAA‑CCCACCGCA‑CCAAA‑G‑aat > 1:1099632/1‑237 (MQ=255)
tccccACCACAC‑CAAAGAGAAAC‑ATTCCGGT‑CGACATGGGGGCCGCCG‑GCACGGCGTGTACCACAAACAGCAACGGTAAAATGAACAGGAAGTAAAATC‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTT‑AGGGTGGC‑GGGAATCAC‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTa < 2:839499/237‑1 (MQ=255)
tGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAAGTTTC‑GGGGATCAG‑C‑CAG‑CCCG‑CCACTTTTTCCCCATTTTTCGGGGCGGCAGGG‑AAAGACATCG‑CT‑TAAGAAAAA‑CCCCCCGCA‑CCCAA‑A‑Atttttttgtt > 1:45754/1‑233 (MQ=255)
gcccccccACAC‑AAAAGATAACA‑ATTCGGGC‑CGACATTGAGACCCCAG‑GGCCGGCGTGACCCGCAACAAGCAGGGGGGAAAGAAAAAGGAAGGAAAATC‑CCGGCGGTTCGTAAATCCCCACCAGCAGGGG‑GGTT‑AGGGTGGC‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTa < 2:311320/237‑1 (MQ=255)
gCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTA‑AAGGTTGG‑GGGATTAGC‑C‑AAC‑CCCC‑CCCCTTTTACCCG‑TTTTCCCGGGCGGCAGTG‑GAGTAAAAAG‑CT‑AAAAAAAAA‑GCCACCGCC‑CCCAA‑G‑CATTTTGTG‑TTa > 2:796395/1‑238 (MQ=255)
accacac‑aaAAGAGAAAC‑ATTACGGG‑CGAAATGGAGGCCCCCA‑GCACGGCGTGTACCGAAAACAGAAAGGGTGAAATGAACAGAAAGGAAAATT‑CCAGCGGTTCGGTAATCCCCACCAGCATGGC‑GGTT‑AGGGTTGG‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 1:218902/239‑1 (MQ=255)
accacac‑aaAAAACATAA‑TATACGGC‑CGACAGTGGGCACGCCA‑GCCGGGCGTGTCCCGAAAACACCAGGGGTAAAAAAAACAGGAGGGTAAATC‑CCAGGGTTTCGATATTCCCCCCGACCAGGGC‑GTTA‑AAGTTTGG‑GGAAACCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 2:936560/239‑1 (MQ=255)
aaaagagaaagaataTAC‑ATTACGGT‑CGACATGTGGGCCCCCA‑GCGCGGCTTGTCCCGCAAACAGAAAGGGTGGAATGAACAGAAAGGTAAATC‑CCAGCGGTTCGGTAATCCCCCCCAGCAGGGC‑GTTA‑AAGGTTGC‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 1:911491/225‑1 (MQ=255)
caccccccaaagtacgacttggcGGT‑CGACAGTGGGGCGGCCC‑GCAGGGGGTGTACTGCAAACAGCACCGTTGAAACGAACAGGAAGGTAATTG‑CCGGCGGTTCGTTAATCCCCCCCACAATGGC‑GTTT‑AAGGTTTG‑GGGACTCGG‑C‑GTC‑TCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 2:825419/217‑1 (MQ=255)
acac‑caAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑CGGGAACAA‑C‑AAA‑CCCC‑CCCCTTTTTCCCCCTTTTCCGGTGCGGCCGTG‑GAGGACAACG‑CC‑AAAGAAAAA‑CCCACCGCC‑CCCAA‑G‑ATTTTTGAG‑TTAC‑CGG‑G‑CAg > 1:685499/1‑239 (MQ=255)
agaTAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑C‑AAA‑CCCC‑CCCCCTTTACCCCGTTTTTCCGTGCGGGCGTG‑AAGTACATCG‑CT‑CAAGAAAAG‑CCCCCCGCA‑CCCAA‑A‑AATTTTTAG‑TTTC‑CCT‑G‑CAGGGCAAAAc > 2:223603/1‑238 (MQ=255)
agaTAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGGAAAAG‑A‑AAA‑CCCC‑CCCCTCTTATCCCATTTTTCCGGGCGGGAGTG‑AAGGACATCG‑CC‑AAAAAAAAG‑CCCACGGCA‑CCAAACA‑ATTTTTTGG‑TAAC‑CG‑‑A‑CAGGGCaaaaa > 2:238699/1‑237 (MQ=255)
tAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAAGTTGC‑GGGGATCAG‑C‑AAA‑CCCC‑CCACTTTTTCCCGCTTTTTCGGTGGGGCAGTG‑AAGGAAATAG‑CC‑AAAAAAAttgc > 1:277370/1‑191 (MQ=255)
tAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGG‑GGGGAACAG‑C‑CAA‑CCCG‑CCCCCTTTTCCCGATTTTTCGGGGCGGCAGGG‑GAGTACAACG‑CT‑CAAGAAAAG‑CCCACGGGA‑CCCAA‑G‑ATTTTTTGG‑TTTA‑CGT‑G‑CAGGGCAAAAACG‑c > 1:1311788/1‑238 (MQ=255)
c‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGTTTC‑GGGGATCCG‑C‑AAA‑CCCC‑CCCCCTTTTCCCCACTTTCCCGTGCGGGCGGG‑GAGGACATTGCCT‑AAAAAAATG‑CCC‑CCGCA‑CCCAA‑A‑AATTTTTAG‑TTAT‑CGT‑G‑CCGGGCAAAAACG‑ccc > 2:975121/1‑237 (MQ=255)
c‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGG‑GGGGAACAG‑C‑AAA‑CCCG‑CCACCTTTATCCCATTTTTCGGGGGGGCAGGG‑AAGGAACACG‑CT‑AAAGAAAAG‑ACCACGGGACCCAAA‑A‑ATTTTTGGT‑TTAC‑C‑T‑G‑CAGGGGaaaaaccccc > 2:1110934/1‑232 (MQ=255)
gT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑C‑AAG‑CCCG‑CCCCTTTTAACCGATTTTTCGGTGCGGCAGTG‑GAGTAAAACG‑CT‑AAAGAAAAG‑CCCACCGCA‑CCAAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CCGGGCAAAACCA‑CCTTCCgggga > 1:284853/1‑237 (MQ=255)
t‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGGTGG‑GGGGATCAA‑C‑AAA‑CCCC‑CCCCTTTTTTCCGCTTTTTCCGTGGGGCAGGG‑GAGAAAAACG‑CT‑AAAAAAAAA‑CCCCCGGCA‑CCAAA‑A‑ATTTTTTAGTTTAC‑GGG‑C‑CAGGGAAAAACCG‑CCTTCCGGGac > 2:940523/1‑238 (MQ=255)
gACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTGGG‑GGGAATAAC‑C‑AAC‑CCCC‑CCCCTTTTCCCCG‑TTTTTCGGGGCGGCAGTG‑GAAGACATAC‑CT‑AAAAAAAAA‑CCCCCGGGC‑CCCAA‑A‑ATTTTTTAG‑GTAC‑CGG‑G‑GAGGGGAAAAACG‑CCTTTCCGGaaaaa > 1:170924/1‑239 (MQ=255)
gACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGAAACAA‑G‑CAG‑CCCC‑CCCCTTTTTCCCCCTTTTTCCGTGTGGGAGCG‑AAGTACATCGCCC‑AAAAAAATC‑CCCCCGCCC‑CCAAA‑A‑CTTTTTG‑G‑GTAC‑CCT‑C‑GAGGGCAACACCC‑CCTTccccggaca > 2:776649/1‑231 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGG‑GGGAATCAA‑CAAAC‑CCCC‑CCCCTTTTCCCCCTTTTTCCGG‑GGGGCCGGG‑GAGAAAAAAC‑CT‑AAACAAAAGCCCCCCGCCC‑CCAAA‑A‑ATTTTTTA‑‑TTAA‑CGT‑G‑CAGGGGAAAAACA‑CCCTCCGGGgacaac > 2:1197959/1‑239 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGGAACAA‑C‑AAA‑CCCC‑CCCCCTTTTCCCCATTTTTCCGTGCGGGAGGG‑AAGGACAACC‑CT‑TAAAAAAAG‑CCCCCGGCC‑CCCAA‑G‑ATTTTTTAG‑TTTA‑CCT‑G‑CAGGGCAAAACCGCCCTTCCGGGacaa > 2:1527838/1‑235 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGGATCAA‑C‑AAG‑CCCC‑CCCCCTTTACCCCGCTTTTCGGGGCGGCCGTGAAAGAACA‑CG‑CTCAAAAAAATC‑CCACCGCCC‑CCAAA‑G‑TTTTTTGGG‑TTA‑‑CGT‑GCCAGGGAAAAACAG‑CCTTCGGGGaaaa > 2:780694/1‑236 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAAGGTTC‑GGGAATCAA‑C‑AAA‑CCCC‑CCCCTTTTTCCCCATTTTTCGGGGCGGCAGGG‑AAGGTAATCG‑CC‑AAAAAAAAG‑CCCCCCGCC‑CCCAA‑A‑ACTTTTTAG‑TTTCACGT‑‑‑CCGGGCAAAACAG‑CCCTCCcgggcaacc > 2:11886/1‑233 (MQ=255)
gccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGTTGG‑GGGAAACAG‑C‑AAG‑CCCC‑CCACCTTTTCCCGATTTTTCCGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAAAAATG‑CCCACGGCA‑CCAAA‑A‑ATTTTTTAG‑GTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCCGGGACAAAGATTTTAGCg > 1:933322/1‑238 (MQ=255)
gccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGGTTG‑GGGGATCAA‑C‑AAA‑CCCGCCCCCTTTTACCCG‑TTTTTCGGGGCGGGCGGG‑AAGGACATCG‑CT‑AAAAAAAAA‑CCCCCCGCACCCAAA‑A‑ATTTTTTAG‑‑TAC‑CGTGG‑CGGGGAAAAACCC‑CCTCCCGGG‑ACAAACAGTTCAGCgg > 2:450989/1‑239 (MQ=255)
ccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAG‑C‑AAGCCCCC‑CCCCTTTTACCCCTTTTTCC‑GTGCTGGCGTG‑ACGTACAACG‑CT‑CAAGAAAAA‑CCCACCGCC‑CCCAA‑G‑AATTTTTAG‑TTAC‑CCC‑G‑CCGGGGCAAACCG‑CCCTCCGGGACCCACCAGTTCAACgc > 2:1101289/1‑237 (MQ=255)
gcgtggtACCGAAAACAGCACCGGTAAAATGACAAGGAAGGTAAAGT‑CCGGCTGTGCGGGATCCCCCCCCAGCAGGGG‑GTTT‑AAGGTCGC‑GGAAATCAC‑C‑ACG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑Ggcgc < 2:6254/234‑1 (MQ=255)
cGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTT‑AAGGTT‑C‑GGGAAACAG‑C‑CAA‑GCCG‑CCACCTTTATCCGACTTTTCCGTGCGGCAGGG‑AAGTAAAACG‑CC‑AAAAAAAAG‑CCCCCCGCC‑CCCAA‑GAATTTTTGA‑‑TTAA‑CGT‑G‑CAGGGGCAAACCG‑CCCTCCCGGAACAACCATTTTAgacactcgcggcc > 2:861969/1‑226 (MQ=255)
ctACAGCAAAAAGCAAGGGGAAAAAGACCAGGAA‑GTAAATTCCCAGGGGTGCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AAGGTTGG‑GGGAATCAA‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑aaa < 2:678880/238‑1 (MQ=255)
tACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGGTGG‑GGGAAACAG‑C‑AAG‑CCCC‑CCCCCTTTTCCCCGTTTTTCGGTGGGGCAGGG‑AAGTACATCG‑CC‑AAAGAAAAA‑CCCACCGCA‑CCAAA‑G‑ATTTTTTAG‑TTAC‑CCG‑G‑CAGGGGAAAAACG‑CCCTCCCGGAACAAACAATTCAACgggcccgcgccgcaaa > 2:907100/1‑225 (MQ=255)
ccGAAAACAGCAAGGGGAAAATGAACAGGAAGTTAATTC‑CCGGCGTTTGGGTAATCCCCCCCAGCTGGGC‑GGTT‑AAGGTTGG‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑Tg < 1:1110934/239‑1 (MQ=255)
taaaagagaacgggTGAAATGAACGGGAAGGTAAATT‑CCAGCGTTTGGGAACTCCCCACCCGCATGGG‑GTTA‑AAGGGGGC‑GGGAACAAG‑A‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGaa < 2:1317597/227‑1 (MQ=255)
caaaagaacagctgtacaaTGTAAAGGAGGGTAAGTC‑CCGGCGTTTCGGTAATTCCCACCATCTTGGG‑GATT‑AAGGTTGG‑GAGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGaa < 2:28217/222‑1 (MQ=255)
acAAACAGCAACGGTAAAATGAAAAGGAAGAAAATTT‑CCGGCGGTTCGTTATTCCCCACCAGCATGGC‑GTTT‑AGGGTGGG‑GGAAACAAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGaa < 2:45754/238‑1 (MQ=255)
cAAACAGCAACGGTGAAATGAACAGAAAGGAAAATT‑CCGGCGGTTGGGTAATCCCCCCCAGCTTGGC‑GTTT‑ATGTTTGC‑GGGAATAAG‑C‑AGG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGaa < 1:21538/238‑1 (MQ=255)
aCGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGCT‑TAGGGTGC‑GGGAAGAAG‑C‑AAG‑ACCC‑CCACTTTTACCCGAGTTTTCGGCGCGGCAATG‑AAGTACAACG‑CT‑AAAGAAAAA‑CCCACCGCA‑CCCAA‑A‑ATTTTTTGG‑TTAC‑AGT‑G‑CGAGGCAAAACCG‑CCCTCCGGGAAAAAAGAATTCAGGGGCG‑C‑CGCGGCC‑AAAA‑AGAACTCATCCAGa > 2:1342169/1‑239 (MQ=255)
aaaaaGAACGGGAAGATAAATT‑CCAGGGGTAGGGTAACCCCCCCCCGTCGGGC‑GGTA‑AGGGTTGC‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGAtgct < 1:431300/237‑1 (MQ=255)
aaaaaGAACAGGAAGGAAAATC‑CCGGCGGTCCGGAAATCCCCCCCAGCAGGGC‑GGTT‑AGGGTGGC‑GGGAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGAtgct < 1:776649/237‑1 (MQ=255)
aaaaTGAAGAGGAAGTAAAATC‑CCGGCGGTTCGATAATCCCCACCCGCAGGGC‑GGTT‑AGGTGTGC‑GAAAACCAA‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGAtgct < 2:1099632/237‑1 (MQ=255)
aaaaTGAAAAGGAGGGAAAATT‑CCAGCGTTCCGGTAATTCCCCCCAGCATGGG‑GGTT‑AAGGTGGG‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGAtgct < 1:739550/237‑1 (MQ=255)
aaaTGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑C‑AAG‑CCCG‑CCACTTTTTCCCGATTTTTCGGTGCGGCAGGG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTTAG‑TTTC‑CGT‑G‑CAGGGCAAAAACG‑CCTTCCGGGAACAACGATTTCAACGGCT‑C‑GGCGCTC‑AAAC‑TGAAACCTTGCCGAttcttc > 1:718112/1‑237 (MQ=255)
aaagaacgagAAGGAAAATT‑CCGGCGTTTCGTTACTCCCCCCCAGCAGGGC‑GGTG‑AGGGTTGG‑GAGAATCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTgcg < 2:170924/230‑1 (MQ=255)
agAACAGGAAGATAAATC‑CCAGCGGTTCGATAATCCCCACCAGCAGGGC‑GGTA‑AAGGTTGC‑GGGAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 1:1101289/238‑1 (MQ=255)
aaCAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑C‑AAA‑CCCG‑CCCCTTTTACCCCATTTTCCGGGGCGGCAGGG‑AAGTAAATCC‑CT‑AAAGAAAAG‑CCCACGGCA‑CCCAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGGAAAAACG‑CCCTCCCGGAACAACGATTTTAGAGGCT‑C‑CGCGCGC‑AAAC‑TGGACTCTTTCCGCTGCCGCcccc > 2:118158/1‑238 (MQ=255)
aaCAGAAAGATAAATT‑CCGGCTGTTCGCTAACCCCCACCGGAATGGC‑GGTT‑AGGGGGGC‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 2:277810/237‑1 (MQ=255)
ccAGGAAGATAAATT‑CCGGCGTTTCGGTAACTCCCACCAGCATGCC‑GGTT‑AAGGTTGC‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAg < 1:1244330/238‑1 (MQ=255)
aggaaagaaattcccggcgtgcgggTAACCCCCCCCAGCATGGT‑GGTT‑AGGGTGGG‑GGGAATCAA‑G‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa < 2:485094/216‑1 (MQ=255)
tgaatataattcgcggggtggcGGTCATCCCCACCGGTGAGGT‑GGTT‑AGGGTCGG‑GGAAATCAC‑C‑AAG‑CCCG‑CCACTGTTACCCGATTTGCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa < 2:541964/217‑1 (MQ=255)
gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAAACAG‑C‑AAG‑CCCG‑CCACTTTTTACCGCTTTTTCGGGGCGGGAGTG‑AAGGACATCG‑CT‑AAAGAAATG‑CCCCCGGCC‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAAACG‑CCTTCCGGGAACAACGATTTTAACGGCC‑CGGGCGC‑C‑AAACATAAACTCTTGCAGATGC‑GCGccccacaca > 2:385709/1‑233 (MQ=255)
aaaTTCCCAGCGGTTCGTTAATCCCCACCAGCAGGGG‑GTTT‑AAGTGTGG‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTg < 1:133444/238‑1 (MQ=255)
ccaggCGGTGCGTTAACTCCCACCAGACTGGG‑GGTG‑TGGGGTGC‑GGAAATCAG‑C‑ACC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATgcc < 2:1308200/235‑1 (MQ=255)
atccccACCAGTAGGGG‑GTTT‑AAGGTTGC‑GTGAAACAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGc < 2:718112/236‑1 (MQ=255)
ccccggaaTGGC‑GGTT‑AAGGTTGC‑GGAAATCAA‑G‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:509510/232‑1 (MQ=255)
ccccaGCTGGGT‑GGTT‑AGGGTGGG‑GGGAGTCAC‑G‑AGG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:595803/237‑1 (MQ=255)
ccccaGCATGGG‑GGTA‑AAGGTGGG‑GGGAATAAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1527838/237‑1 (MQ=255)
cccacgCAGGGG‑GGTT‑AGGGTGGC‑GAGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACAGCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTGCAACAGCTGCCGGAc < 1:780694/234‑1 (MQ=255)
caccaGCATGGC‑TGTT‑AGGGTGGG‑GGAAAACAG‑A‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 2:1388320/239‑1 (MQ=255)
caccaGCATGGC‑GGTT‑AAGGGTGC‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:796395/239‑1 (MQ=255)
cccccgaaagtgggTT‑AGGGTGGC‑GGAAATCAG‑A‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1241099/227‑1 (MQ=255)
accaGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTTCCCGATTTTCCGGTGCGGGGGTG‑AAGTACATCG‑CT‑AAAGAAAAA‑CCCACGGCA‑CCAAA‑G‑GTTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTTAGCGGCT‑C‑GGCGGTC‑AAAC‑TGAACTCTTGCAGGAGCCGGCCCCCATACATCTGCATGCCCGCTTCAACAGCttgcgggc > 2:1175704/1‑231 (MQ=255)
accaGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCC‑CCCCCTTTTCCCCATTTTTCCGGGCGGCAGTG‑AAGGACATCG‑CC‑AAAAAAATG‑CCCACGGCC‑CCAAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCCGGAACAACGATTTTAGCGGCC‑C‑CGCGCCCAAAAC‑TAAACCCTTCCAG‑TGCTGCGCCCCGGAAATCTTAAATCCGCCCTCCACCACCGCCGGag > 2:483610/1‑237 (MQ=255)
caGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTTCGGGGCGGCAGGG‑GAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa > 1:1320555/1‑204 (MQ=255)
tggggggTT‑AAGGTTGC‑GGGAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑t < 1:78860/234‑1 (MQ=255)
tGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCCCTTTTTCCCGCTTTTTCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCCCGGCC‑CCCAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGCAAAAACG‑CCCTCCGGGAACAACGATTTCAGCGGCT‑C‑GGGGCCC‑CAAC‑TGAACCCTTTCAGAATCTGCCCCCCGTACACCTGAGTTGCCCCCTCCACCGCTGCCGGACCCAAAA‑Ta > 2:621512/1‑239 (MQ=255)
c‑GGTT‑AGGGTGGG‑GGAAACCAG‑A‑ACG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑Taaa < 1:807057/238‑1 (MQ=255)
gggTT‑AAGGTAGC‑GAG‑ATCCG‑C‑AAGACCCG‑CCACTTTTTCCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCCCGTCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑Taaa < 2:1427250/237‑1 (MQ=255)
aGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCCCTTTTACCCGATTTTCCGGTGCGGCCGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCCCGGCA‑CCCAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTCC‑GCCGCCC‑AACT‑GGACCTCTT‑CAGATGCCTCGCCCCGTACCTCCTGATGCCCCCCTCAACCACCGCCCGGCCCAAGATTAAACTgcc > 2:554114/1‑236 (MQ=255)
gcggggAACCGG‑C‑AAG‑CCCG‑CCACTGTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGa < 1:312342/236‑1 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTg > 1:1184428/1‑93 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1186452/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:940875/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1378478/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1488177/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1510172/1‑239 (MQ=255)
c‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTg < 2:1184428/93‑1 (MQ=255)
gggAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGa > 1:266994/1‑239 (MQ=255)
gAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGaa < 1:483610/238‑1 (MQ=255)
aagcAG‑C‑ATG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGAAg < 1:499219/235‑1 (MQ=255)
aTCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACACAAGA‑TAAACTGTCCGTAGCAGAAgtg > 2:788930/1‑239 (MQ=255)
cAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCTGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTACGTAGCTGAAgtggt > 2:1492133/1‑239 (MQ=255)
cAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGAAgtggt < 1:676895/239‑1 (MQ=255)
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TATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATG‑CCCACGGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGCAAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCTC‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGAAGTGGT > NC_000913/3862450‑3862908
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
