Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F9 I0 R1
|
80 |
116.8 |
2384848 |
97.0% |
2313302 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,383,710 |
C→A |
26.2% |
L84F (TTG→TTT) |
ycjW ← |
LacI family putative transcriptional repressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,383,710 | 0 | C | A | 26.2%
| 234.7
/ 27.9
| 108 | L84F (TTG→TTT) | ycjW | LacI family putative transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base C (59/19); new base A (2/27); total (62/46) |
| Fisher's exact test for biased strand distribution p-value = 6.35e-11 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 109 total aligned reads displayed.
GACAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAA > NC_000913/1383473‑1383948
|
gACAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCa < 2:172434/239‑1 (MQ=255)
aaTAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACt > 2:231105/1‑239 (MQ=255)
aTAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCaa < 2:221395/234‑1 (MQ=255)
aTAAACATGGGCATATTGACCTTCAACGTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCaaaa < 2:686034/236‑1 (MQ=255)
aCATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑aga > 2:865085/1‑239 (MQ=255)
ggCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAACTGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGAGGTGATGGCATGCAAAACTTC‑AGAGaaaa > 2:454530/1‑239 (MQ=255)
ggCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGaaaa > 2:1042969/1‑239 (MQ=255)
ggCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGaaaa > 2:80858/1‑239 (MQ=255)
ggCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGaaaa > 2:571408/1‑239 (MQ=255)
ggCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGACTTTAATCATTTTATGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGAGGTGATGGCATTCAAATATTC‑AGAGaaaa > 1:897315/1‑239 (MQ=255)
atTGACCTTCCACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGCTGGCATGAAAAACTTC‑AGAAAAAAA‑Cgta > 1:1160659/1‑237 (MQ=255)
ttGACCTTCAACTTTGCCAATCACCACCACCGGCATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGAt > 2:313411/1‑239 (MQ=255)
aCCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTa > 1:131709/1‑238 (MQ=255)
aattgtgtaaaagaaacagcccccacgGGAATATAATATTTACCGATTTGGGCAAAAAATTACTCATCCGTTGGCGAACTGAGC‑ATAATAATGCCTTTATTCATTTTCTGTTTAATTTTGCTTC‑CGCTTTTTTGCAGATCTTCTGCCGGATTGGGG‑GCCGTTTG‑TAATTTCCCGTCGAAACC‑TC‑TTCCTT‑CA‑GCTTTGGCGGTGTTGGCATGCAAAGCTTA‑AGAAAAAAA‑CGTATTccc < 1:1084510/217‑1 (MQ=255)
tCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACccg > 2:137633/1‑238 (MQ=255)
gtaagatgggtaaaagaggcggccGGAATATCATTTTTATCGAGTGGGAAAAAAAAGGACTCACCCGCTGGCGAATTGAGC‑ATAATAATGCTTTTAATCTTTTTCGGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGTTTGTGC‑GACGTTTG‑TAATACCCCTTCAAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCA‑GCAAAACCTCAAGAGAAAAA‑CGGATTccc < 1:1169804/214‑1 (MQ=255)
cAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGTAAAACTTC‑AGAGAAAAA‑CGGATTACccgcc > 2:93525/1‑239 (MQ=255)
cAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACccgcc > 2:1130212/1‑239 (MQ=255)
aaaCTTTGCCAACCACCACCCCCTAAATGTAATGTTTTAAAAATGGGAAAAAAAATGACTCATCCGTTGGCAAAC‑GAGCAATAATAATGCCTTTAAATATTTTCTGCTTAATTTTGCTTT‑CGCATTTTGGAAAATCTTCTGCGGGATTTTGC‑GGGGTTTG‑AAAAACCCCGCCAAACCC‑TT‑CTTCTT‑CG‑GCTTTGGCGGTGATGGCATGAAAAATTTC‑AGAAAAAAA‑CGGATTACccgcc < 1:934849/238‑1 (MQ=255)
aaCTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACccgccg > 2:982344/1‑239 (MQ=255)
aaCTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGCGCAAAAAATGACTCATCCGCTGGGGAACTGCGC‑ATAATAATGCCTATAATCATTTTCTGCTTAATTTTGCTTT‑CGCCTTTTTGCAGATCTTCTGCCGGATTGTGC‑GCCGTTTG‑TAATATCACGTCGACACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGCATTGCAAAATTTC‑CGATATAAC‑CGGATTACccgtcg > 1:1018344/1‑239 (MQ=255)
ccggataaactaatTTATGGAGTTGGAAAAAAAAGGTCTCATCCTCTGTGACAGTGAGA‑TTAATAATGCTTTTATCCTTTTTCTTCTTTATTTGGTTTT‑CGCATTTTTCCATATTTTCTGCCGTATTGGGC‑GAGGTTTG‑AAATACCACGTCAAACCC‑TT‑CTTCTT‑CA‑TCTTTGGCGGTTATGGAATGAAAAATTTC‑AGAGAAAAC‑CGGATTGCCCGCCGTAGTTTTGGTCGAACGGGTa < 1:690871/227‑1 (MQ=255)
taaataatatatTTAGCGAGTTGGGAAAAAAATGCTTCTCCCGCTGGCTAAATGAAC‑ATAAAAATTCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTGGCAGTGCTTCGGCGGGTTTGTGC‑GCGGTTTG‑AAATACAACGGCGAAACC‑TT‑CTTCTC‑CA‑GCTTGGGCGGTGGTGGCATGAAAAGCAAA‑AGAGAAAAC‑CGTATTACCCGCCGTAGTTTTGGTCGAACGGGTAGa < 1:440180/231‑1 (MQ=255)
gAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGaa > 2:935662/1‑239 (MQ=255)
attaaatttttATCGAGTGGGAAAAAAAAGGACAACTCCGCAGGCGAAAGGAGC‑ATAATAATGCTTTAAATCTTTTTCTGCTTATTTTTGTTTT‑CGTATTTTTGCAGCTCTTCTGCTGTATTGTGC‑GACTTTTT‑TAATGTCACGGAAAACCT‑TT‑CTCCTT‑CA‑CTGTTGGCGGTGTTGGAATACAAAACTAC‑AGAAAAAAG‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAAt < 1:490461/231‑1 (MQ=255)
atatCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGtt > 2:1084510/1‑219 (MQ=255)
tCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTCGTTTTGGCCGAACGGGTAGAAATCa > 2:690871/1‑238 (MQ=255)
cATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCAcc > 2:368976/1‑239 (MQ=255)
tatTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGtt > 2:1169804/1‑213 (MQ=255)
tatTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCaacct > 1:252816/1‑235 (MQ=255)
tatTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCAt > 1:75213/1‑239 (MQ=255)
ttatgtaGTGGGGCAAAAAAAACCTTATCCGCGGGCTATCTGACA‑GAAATATTGCTTTTATTCATTTTTTTTTTATTTTTTTTTG‑TGCTTTTTTCAAGTTTTTCTG‑CGGGTTGGGG‑GGGTTTTGATAAAACCATGTC‑AAAAC‑TT‑CCTCTT‑TACGCTTTGGGGGTGGTGACATACAAAACTTA‑AGAGAAAAA‑CGAATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAAt < 1:258912/233‑1 (MQ=255)
aTCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGCGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGAGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGTGGACAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATg > 2:744016/1‑238 (MQ=255)
aTCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATg > 2:516470/1‑238 (MQ=255)
aGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATc > 2:1164595/1‑239 (MQ=255)
ttGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCaa > 2:338217/1‑239 (MQ=255)
cAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAAccc > 2:614349/1‑239 (MQ=255)
gcaaactggataaaatagtGCTTTTAATCTTTTTCTGCTAAATTTGTCTTT‑CGCATTTTTCCAGATCTTCTGCGGGATTGTGC‑GCCGTTTT‑AAATACCACGTCAAAACT‑TT‑CTTCTT‑CA‑GTTTTGGCGGTGATGGCATGAAAACCTTC‑AGAAAAAAA‑CGAATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAAt < 1:960762/183‑1 (MQ=255)
accTGAGA‑ATAATAATTCTTTTAATCTTTTTCTGTTTAATGTTTCTTC‑CGCTTTTTTGCAGTTCTTCTGCCGGATTGGGG‑GACTTTTT‑TAATACACCGTCAAACCC‑TT‑CTTCTG‑CA‑GCTTGGGGGGGGAGGGCATGAAAACCTTA‑AGAAAAAAA‑CGTATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGc < 1:1023200/237‑1 (MQ=255)
gacc‑ATAAAAATCCCTTTAATTTTTTTCTGTTTAATTTTTCTTC‑CGCTTTTTGGCAGATCTGTTCCGGGATTGTGG‑GACTTTTG‑TAATATCCCGTCAAAACC‑TT‑‑TTCTTCCA‑GTTTTGGCGGGGATGGCATGAAAAACGAC‑AGAAAAAAC‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGt < 1:324578/236‑1 (MQ=255)
c‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGCTGGCCTGCACAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGCTCGAACGGGCAGAAATCACCATAATGGCATCAAAACCCGAAGCGGTAAGCGCGCGCGCAAGCTTGTTTg > 1:312546/1‑239 (MQ=255)
c‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATg > 2:960762/1‑196 (MQ=255)
taataaGTCTTTTATTCATTTTTTGCTTAATTTGGCTTC‑CGCTTTTTTGCAGATCTCCGGCCGGATTGTGC‑GACGTTTG‑TAATAGCACTCCGAAACC‑TT‑TTTTTT‑AA‑GCTTTGGCGGTGATGGAATACAAAACTCC‑AGAAAAAAA‑CGTATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGc < 1:488659/239‑1 (MQ=255)
taaaaaTGCCTTTAATTTTTTTCTGTTTAATGTTTCTTT‑CACTTTTTTGCAGCTCTTCTGCGGGATTGTGG‑GACGTTTG‑AAATATCCCTTCAAAACC‑TT‑CTTCTA‑GA‑GCTTGGGCGGGGATGGCATGAAAAACTGC‑AGAAAAAAA‑CGGTTTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGc < 1:935662/239‑1 (MQ=255)
taatGCTTTTAATCTTTTTCTGTTTATTTTTGCTTT‑CGCTTTTTTGCAGTTTTTCTGCCGGTTTGTGC‑GCCGTTTG‑TAATACCACGGCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTAATGGAATGAAAAACTTC‑AGAAAAAAA‑CGAATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGa < 1:516470/239‑1 (MQ=255)
aggcttttAATCATTTTCTGTTTAATTTTGCTTT‑CGCTTTTTTGAAGATCTTCTGCCGGTTTGTGC‑GACGTTTG‑TAATATCAC‑TTGAAACCTTT‑CTTCTT‑CA‑GCTTGGGGGGTGATGGCAAGAAAAACTTC‑AGAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATa < 2:252816/234‑1 (MQ=255)
tGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGAt > 2:64834/1‑237 (MQ=255)
ccTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGCTGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGAt > 2:78639/1‑235 (MQ=255)
ccTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGAt > 2:1105710/1‑235 (MQ=255)
ccTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGAt > 2:18544/1‑235 (MQ=255)
tttaactgtttCTTGTTTATTTTTCTTTCCCCTTTTTTGCAGTTCTTCGGCCGGTTGGGGC‑GATTTTTA‑AAATACAACGCCAAACCC‑TT‑CTTCTC‑CA‑GTTTGGGGGGGGAGGTCATGAAAAACAAC‑AGAAAAAAC‑GGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTa < 1:571408/231‑1 (MQ=255)
ttAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTaa > 1:113876/1‑239 (MQ=255)
gataaTTTTTTGTTTAATTTTGCTTT‑CGTGTTTTTGCAGACCTTTTGCCGGTTTGGGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑TCTTGGGCGGGGATGGAATGAAAACCTGA‑AGAGAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAAtt < 1:263935/235‑1 (MQ=255)
tttCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCaa > 2:569470/1‑239 (MQ=255)
ttCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAAt > 2:659262/1‑239 (MQ=255)
gCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGc > 2:832903/1‑238 (MQ=255)
cTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATggtca > 2:879327/1‑236 (MQ=255)
cttttttGCAGATTTTCTGTGGGTTTTGGC‑GTCTTTTT‑AAAAATCACTGCCAACCC‑TT‑TTCTTT‑CA‑GTTTGTGCGGTG‑TGGGACTCAAAACTTT‑CGAAAAAAACCGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTcgcg < 1:614349/237‑1 (MQ=255)
tttttGAAGATTTTTGGCGGGATTGTGC‑GACGTTGT‑TAATACCAGGTCAAAACC‑TT‑TTTCTC‑CA‑GCTTGGGGGGTGATGGAATGAAAACCTTC‑AGAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTcgcgcg < 1:1105710/239‑1 (MQ=255)
tttgtGCAGATCGTGTGCCGGATTGTGG‑GACGTGTG‑TAATAGCCCGTCGAAACT‑TT‑TTTCAT‑AC‑GTTTGGGGGGGGACGGGATGAAATACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTcgcgcg < 1:88346/239‑1 (MQ=255)
gattgtctGCCGGTTTGGGC‑GACGTTTT‑AAATATCACGTCGAACCC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCAGGCAAAACTTC‑AAAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCgg < 1:865085/233‑1 (MQ=255)
tttttctGCCGG‑TTGTGCGGACTTTTG‑TAAAAACACGGCAAAACT‑TC‑CTTCTT‑CA‑GCTTTGGCGGTGTTGCCAGACAAAACTTG‑AGAGAAAAA‑CGTATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCgggg < 1:1164595/236‑1 (MQ=255)
ttcttcgGCCGGTTTGTGC‑GACGTTTG‑TAATATCCCGCCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTCA‑AGAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCgggg < 2:131709/238‑1 (MQ=255)
cttctGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGgag > 2:284513/1‑239 (MQ=255)
tcagatgtgtaaaagaaacgggaaaTACCACGTAGAAACC‑TT‑CTTCTT‑CA‑GTTTGGGGGGTGATGGCATGCAAACCTTC‑AAAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGat < 1:506034/215‑1 (MQ=255)
cGGTTTGTCG‑GACTTTTG‑AAATATCGCGCGGAACCC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGAGGGAATCCAAACCTTC‑AAAAAAAAC‑CGGTTTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAg < 2:23657/239‑1 (MQ=255)
aTTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGttt > 2:1137734/1‑239 (MQ=255)
ggagtttag‑TAATATCACGACAAAACC‑TT‑CTTCTC‑CA‑GCTTTGGGGGTGATGGAATGAAAAACTTC‑AGAGAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTa < 2:1160659/230‑1 (MQ=255)
ggACGTTTG‑TAATATCACGAAGCAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATTGCATGCAAAACCTC‑AGACAAAAC‑CGGATTACCCACCGCGGTTTTGGAGGAAAGGGCAGAAATAAACATAATAGAAAAACAACCCGAAAAGGACAGCGCGCGGGCCAAGTTGTTTGGATGGAACGCGTAA‑TCCTCACTGGCCCGAAACACTTTTTCGACCCCTTCCCGGGAAGTTATAGCTTGCTTa > 1:579566/2‑238 (MQ=255)
tttG‑TAAAATCCCGTCGAAACC‑TT‑CTTCTC‑AG‑GCTTTGGCGGTGATGGCATGAAAAACTTC‑AGAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGc < 2:1096785/239‑1 (MQ=255)
tttG‑AAATATCCCGACGAAACC‑TT‑TTTCTT‑CA‑GCTTGGGGGGTGAGGGCATGAAAAGCTTC‑AGAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGc < 1:64834/239‑1 (MQ=255)
ttttaaataccccgacaaaCC‑TTGCTTTTT‑CA‑GCTTGGGCGGTGATGGCATGAAAAGCTCA‑AGAAAAAAA‑CGGATCCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGc < 1:982344/223‑1 (MQ=255)
tG‑TAAAACCACGTCAAAACC‑TT‑CTTCTT‑CA‑GTTTTGGCGGTGATGGCAGGAAAAACTAC‑AAAAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAc < 1:375406/168‑1 (MQ=255)
g‑TAATATCCCGTCAAACCC‑TT‑CTTCTT‑CG‑GTTTTGGGGGTGATGGCAGAAAAACCCTC‑AGAAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCAcg < 2:1077560/239‑1 (MQ=255)
aaTATCACGTAAAATCC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGAGGAAATGAAAAGCTAC‑AAAAAAAAA‑CGGTTTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCAcgcg < 2:130434/239‑1 (MQ=255)
cACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTTGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCAAGTTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGGAACACTTTTTCGCGCGCCTCCGGGGCGATCTTAGTTTGCTTATTCAGCACGGGTgct > 1:198310/1‑236 (MQ=255)
cACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCtt > 2:475239/1‑147 (MQ=255)
aaCGGCGAAACC‑TT‑CTTCGT‑CA‑GCTTTGGCGGCGATGGAATAAAAAACTTG‑AGAGCAAAA‑CGGATTACCCGCTGTAGTTTTGGTCGAACGGGTAAAAACCACCATAATTGAATCAAAACCCGAAGGGTTAAGCGAGTTGGGCAGCATGTTTGGCTGATAC‑TGTAATTCTTCAATGGCACGTAACACTTTTTCGCGGCTTTCCCGCACGATATTAGTTTGCTTATTCAACCcgcggaata > 1:866193/2‑234 (MQ=255)
aCGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGGAGTTTTGGTCGAACGGGGAGAAATCACCATAATGGCATCAAAACCAGAAGAGGGCAGCGCGCGGTCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATAc > 2:400547/1‑239 (MQ=255)
cGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTa > 2:902169/1‑162 (MQ=255)
cGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAAttctt > 2:375406/1‑168 (MQ=255)
tCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGc > 2:506034/1‑216 (MQ=255)
tCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGt > 2:457740/1‑239 (MQ=255)
cGAAACC‑TT‑CTTCTT‑CA‑GTTGTGGCGGTGATGCCATGAAAAACTTA‑AGAGAAAAC‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGt < 1:711188/238‑1 (MQ=255)
cgaaatcttttccttagtttttGGCGGTAATGGAATCCAAACCTCA‑AAAAAAAAA‑CTGATTGCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGt < 1:998710/219‑1 (MQ=255)
t‑cttctt‑cA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGa > 2:603684/1‑239 (MQ=255)
cA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACg > 2:1140903/1‑236 (MQ=255)
a‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAAtt > 1:594545/1‑146 (MQ=255)
a‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAAtt < 2:594545/146‑1 (MQ=255)
tgcttgtgCGGTGAGGGCATGCAAAACTAC‑AGAAAAACA‑CGATTTCCCCGCCTTAGTTTTGGTCGAACGGGTAGAAATCACCATTATGGCATCAAAACCCGAAGAGGTCAGCGCTCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTg < 2:257843/232‑1 (MQ=255)
cTTTGGCGGTGATGGCATGCAAAACTTA‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGTAGAGGCCAGCGCGCGGGCCAGCTTGTTTGGCAGATAC‑TGTACTTGTTCAATGGACCGTAACTCTTTTTTGCGCGCTTCCGGGGAGATTTTAGTTTGCTCATTCAGCACGCGTGATAAGGTGGTGTTTGATACGCCTgaa > 1:257843/1‑237 (MQ=255)
gagggaaTGAAAAACTAC‑AAAGAAAAC‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCa < 1:284513/232‑1 (MQ=255)
gATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCa < 2:113876/238‑1 (MQ=255)
gATGACACGAAAAACTTG‑AGAAAAAAA‑CGAATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCa < 1:18544/238‑1 (MQ=255)
aagggCATGCAAAACGGA‑AAAAAAAAA‑CGGATAGCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTGTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCa < 1:338217/235‑1 (MQ=255)
ggaaTGAAAACCTTC‑AAAAAAAAA‑CAGTTCCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAata < 1:832903/235‑1 (MQ=255)
cATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGGGGGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCa > 2:49779/1‑239 (MQ=255)
cATGAAAATCTGC‑AGAAAAAAA‑CAGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATc < 1:1137734/238‑1 (MQ=255)
aTGAAAAACGTA‑AAAAAAAAA‑CGAATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCAt < 1:988110/239‑1 (MQ=255)
cAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATaaa > 2:549789/1‑239 (MQ=255)
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GACAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCCGCTGGCGAACTGAGC‑ATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTT‑CGCATTTTTGCAGATCTTCTGCCGGATTGTGC‑GACGTTTG‑TAATATCACGTCGAAACC‑TT‑CTTCTT‑CA‑GCTTTGGCGGTGATGGCATGCAAAACTTC‑AGAGAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATAC‑TGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAA > NC_000913/1383473‑1383948
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
