Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F9 I0 R1 80 116.8 2384848 97.0% 2313302 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,978,861 A→C 10.5% T88P (ACC→CCC)  wzyE → putative ECA polysaccharide chain elongation protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,978,8610AC10.5% 369.5 / 2.8 141T88P (ACC→CCC) wzyEputative ECA polysaccharide chain elongation protein
Reads supporting (aligned to +/- strand):  ref base A (64/57);  new base C (2/17);  total (67/74)
Fisher's exact test for biased strand distribution p-value = 4.50e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 142 total aligned reads displayed.

CTGTTTGTTGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCTTTTACTTTTTCATC  >  NC_000913/3978624‑3979097
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
cTGTTTGTTGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCTCCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCa                                                                                                                                                                                                                                              <  2:192788/238‑1 (MQ=255)
   tttgttGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCCTGTTGCAGGCGTTTTTTTCTG‑CGGTCTGGTTCTCCGCGGTTTACTATGTCTCCt                                                                                                                                                                                                                                           >  1:1021948/1‑238 (MQ=255)
    ttgttgTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTAc                                                                                                                                                                                                                                         >  2:340170/1‑239 (MQ=255)
        tgtCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACTTGGTTGGATTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTTTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCGG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACaaaa                                                                                                                                                                                                                                     <  1:231852/239‑1 (MQ=255)
        tgtCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACaaaa                                                                                                                                                                                                                                     <  1:640151/239‑1 (MQ=255)
          tCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAAc                                                                                                                                                                                                                                    >  2:741005/1‑238 (MQ=255)
             ggCTGCTGTGCACGCTTTTTAGTGCTACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCACTGCCTTCCTTTTATTGTTGTTTTTTCTCACCTTTTTCTTATCCCACCCGCTGACCAGCGTGCTGGAATTTCGCTTTAATGTTGTTCTCGCGCCTCTAGAAATCTTGTTACAGGCGTAGCATTCTG‑CAGGGTGCTTCGACGCGGTTTACTATGTAACCTACAAAAccaga                                                                                                                                                                                                                                >  1:759196/1‑236 (MQ=255)
             ggCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGTGGTCGCGCCCCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGTTTCTACGCGGTTTCCTATCTCACCTACAAAAcctt                                                                                                                                                                                                                                 >  2:432769/1‑236 (MQ=255)
             ggCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCg                                                                                                                                                                                                                                 >  1:488642/1‑238 (MQ=255)
             ggCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCg                                                                                                                                                                                                                                 >  2:1181670/1‑238 (MQ=255)
                    ctGCACGCTGTTTATTCCCACGCTGACCTGGTTTTAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTTACCAGTGTGCTGGTTTTTCGCTTTGATGTTGGTGTCGGGCCGCCCGCACTCTTGTTGCAGGCGTTGCTTTCTG‑CGAGCTGCTTCTACGCGTGTTACTCTGTTCCCTACAAACTCCGCCTACGc                                                                                                                                                                                                                          >  1:644579/1‑238 (MQ=255)
                        aCGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAAc                                                                                                                                                                                                                      >  2:787802/1‑238 (MQ=255)
                           cTGTTTATTGCCACGCTGACCTGGTTGGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGAGGTTGGTGTCGCGCGGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGt                                                                                                                                                                                                                  <  1:103700/239‑1 (MQ=255)
                            tttttttttcctccatGACCTTGTTTGAGTTTCGCCGTTGCCGCTTTAACTTAAATGTCTTCTTTTCATTGCTGTTTTTGCTCCCTTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATGTCGCTTTGATGTGGGTGTCGCGCCCCCGGAAATCTTGTTCCGGGCGTTCCTTTCTG‑CGGGCTGCTTCTTCGCGGTTTACTTTGTCCCCTACAAAACCCGCCTACGCAAACGCGt                                                                                                                                                                                                                  <  1:96137/223‑1 (MQ=255)
                            tGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGt                                                                                                                                                                                                                  <  2:183335/238‑1 (MQ=255)
                            tGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGt                                                                                                                                                                                                                  <  2:813647/238‑1 (MQ=255)
                             gTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGTTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAACACCCGCCTACGCAAACGCGtt                                                                                                                                                                                                                 >  2:613511/1‑238 (MQ=255)
                                tATTTCCACGTTGACCTGGTTTGGGTTTCGCCGTGTGCGCTTTACCTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGCCCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGGGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTg                                                                                                                                                                                                             <  1:1176826/239‑1 (MQ=255)
                                        cGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTGCTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGCTGtcac                                                                                                                                                                                                      >  1:246738/1‑235 (MQ=255)
                                        cGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGt                                                                                                                                                                                                                  >  1:915559/1‑226 (MQ=255)
                                        cGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTAcc                                                                                                                                                                                                      >  1:293276/1‑238 (MQ=255)
                                        cGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTAcc                                                                                                                                                                                                      >  1:962382/1‑238 (MQ=255)
                                           tGACCTGGTTTGAGTTTCGCCGTTTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTTTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTGGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACcgcg                                                                                                                                                                                                   <  2:1139483/238‑1 (MQ=255)
                                             aCCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGc                                                                                                                                                                                                                                >  1:1049905/1‑207 (MQ=255)
                                                 ggTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTGGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAACCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCg                                                                                                                                                                                            <  2:444702/239‑1 (MQ=255)
                                                  gTTTGAGCTTCGCCGCGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAATCCGCCTACGCAAACTCGTTGTTGATCAACCCCtccgtccg                                                                                                                                                                                            >  1:941090/1‑238 (MQ=255)
                                                     tGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACTTTTTTATTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGt                                                                                                                                                                                        <  2:92890/239‑1 (MQ=255)
                                                     gtagtttggtccgtgatgcTTTATCTTCAAGTTCTTCTGTTGATTGTTGTTTTTGCTCAGTTTTTGCTGCGGCTTCCCGCTGACCAGATGGCTGGTATTTCGATTTGATGTTGGGGTCGCGCTGCCAGAAATGTTGTTGCAGTCGTTGCTGTCGG‑CGGGTGGATTCTACGCGGTTGACTATGGCACCAAAAAAACCCGCCTACGCAAACGCGTTGCTGATGTACTGCGCCGTCCGCTGt                                                                                                                                                                                        <  1:261866/222‑1 (MQ=255)
                                                       aGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGttt                                                                                                                                                                                      >  2:611602/1‑239 (MQ=255)
                                                            cGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCAt                                                                                                                                                                                 >  2:773739/1‑239 (MQ=255)
                                                                 tgtgCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAAcc                                                                                                                                                                            >  1:48895/1‑239 (MQ=255)
                                                                 tgtgCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAAcc                                                                                                                                                                            >  2:416200/1‑239 (MQ=255)
                                                                 tgtgCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAAcc                                                                                                                                                                            >  2:910482/1‑239 (MQ=255)
                                                                 tgtgCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAAcc                                                                                                                                                                            >  2:134451/1‑239 (MQ=255)
                                                                  gtgCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAAcc                                                                                                                                                                            <  2:58858/238‑1 (MQ=255)
                                                                           aaCTTCAATTTCTTCTTTTCATTGCTTTTTTTGCTCACCTTTTTCTTCGCCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGATTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGAc                                                                                                                                                                  <  2:901611/239‑1 (MQ=255)
                                                                           aaCTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCCCCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGAc                                                                                                                                                                  <  2:779570/239‑1 (MQ=255)
                                                                               tCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCt                                                                                                                                                                                          <  2:1070659/211‑1 (MQ=255)
                                                                               tCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCt                                                                                                                                                                                          >  1:1070659/1‑211 (MQ=255)
                                                                                 aatttctcctgtcatctccTGTTTTTGCGCACATTTTTCGGCGCGTTCCCTCTGTCCAGATTGCTGGTATCTCGCTTGGGTGTGGGTTTCCCGCGGCACGAAATTTCGGTGTTGGCGTTGGTTTCTG‑GGGGTTGCTTCTACGCGGTTTCCTATGGCACTTGCAAGCCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGGTTACCATGAACCGCGTGGAGACCAATCt                                                                                                                                                            <  1:897663/221‑1 (MQ=255)
                                                                                  aTGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCtt                                                                                                                                                           >  2:1112843/1‑239 (MQ=255)
                                                                                  aTGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCtt                                                                                                                                                           >  1:980688/1‑239 (MQ=255)
                                                                                  aTGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCtt                                                                                                                                                           >  2:702035/1‑239 (MQ=255)
                                                                                        tcttTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGATCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCTTTGCTGATGTACCTCGCCGTCCGCTGTTTACTATGAACCGCATGGAAACCAATCTTACGTgg                                                                                                                                                     >  2:1038427/1‑239 (MQ=255)
                                                                                        tcttTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTgg                                                                                                                                                     >  2:144202/1‑239 (MQ=255)
                                                                                        tcttTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTgg                                                                                                                                                     >  1:1036936/1‑239 (MQ=255)
                                                                                        acttTTCATTGCTGTTTTTGCTCACCTTTTTCTCCGGCTTCCCGCGGACCGGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTgg                                                                                                                                                     <  1:386134/238‑1 (MQ=255)
                                                                                         cttTTCATTGCTGTTTTTGCTCCCCTTTTTCTTCGGCTCCCCGCTAACCAGCGTGCTGGTATTCCGTTTTGTTGTTGGTGCCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGTTTCTCCGCGGTTTACTATGCCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTggg                                                                                                                                                    <  1:203297/239‑1 (MQ=255)
                                                                                         cttTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTggg                                                                                                                                                    <  2:293276/239‑1 (MQ=255)
                                                                                          tttttatgtgttttttgGCTCATCTTTTTCTTCGCTCTCCCGGTTGCCGGCGGGTTGTTTTTGCGATTTGATTTTGGTGTCGCCCCGCCAGAATTCTGTTTGCTGTC‑TTGTTTTCCGCCGGGCTCCTTCTACGCGTTTTTATATTTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCTCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGt                                                                                                                                                   <  1:629951/227‑1 (MQ=255)
                                                                                           tttCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTg                                                                                                                                                  <  2:1051676/239‑1 (MQ=255)
                                                                                              cATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATc                                                                                                                                               <  2:488642/239‑1 (MQ=255)
                                                                                               aTTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGAt                                                                                                                                                >  1:121321/1‑237 (MQ=255)
                                                                                               aTTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGAt                                                                                                                                                >  2:626118/1‑237 (MQ=255)
                                                                                                 tGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTg                                                                                                                                            >  1:342282/1‑239 (MQ=255)
                                                                                                 tGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGCAGACCAATCTTACGTGGGCGATCCTg                                                                                                                                            >  2:756159/1‑239 (MQ=255)
                                                                                                     gTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCAt                                                                                                                                                                                 >  1:1103094/1‑198 (MQ=255)
                                                                                                        tttGTTCACTTTTTGTGTGGGCTCCCCGCTAGCCAGCGTGCTGGTATTTCGCTTTGATGTGGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCGG‑CGGGCTGCTTCTCCGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTa                                                                                                                                     <  1:416200/239‑1 (MQ=255)
                                                                                                                ccTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCCCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTAAGCGGTTTACTATGTCACCTACAAAACCCGCCTACGTCAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTCACACGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTg                                                                                                                             >  1:432374/1‑239 (MQ=255)
                                                                                                                           ggCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCg                                                                                                                   >  2:355892/1‑238 (MQ=255)
                                                                                                                           ggCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCg                                                                                                                   >  2:659546/1‑238 (MQ=255)
                                                                                                                                   gCTGCCCAGCGTCCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTAACCTACAAACCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCAtcttct                                                                                                          <  2:367412/239‑1 (MQ=255)
                                                                                                                                   gCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCAtcttct                                                                                                          <  1:340170/239‑1 (MQ=255)
                                                                                                                                            cGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATc                                                                                                                                               <  2:137537/193‑1 (MQ=255)
                                                                                                                                            cGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATc                                                                                                                                               >  1:137537/1‑193 (MQ=255)
                                                                                                                                            cGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGcaca                                                                                                 >  2:1041236/1‑239 (MQ=255)
                                                                                                                                            cGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGcaca                                                                                                 >  1:1086942/1‑239 (MQ=255)
                                                                                                                                                       ttCTCTTTGATGTTGGGGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTGGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTg                                                                                      <  1:178832/239‑1 (MQ=255)
                                                                                                                                                       ttCGCTTTAATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGTTTTACTATGTCACCTCCAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTg                                                                                      <  2:246738/239‑1 (MQ=255)
                                                                                                                                                           cTTTGATGTGGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCCCCTACAAACCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGt                                                                                  <  1:1134215/239‑1 (MQ=255)
                                                                                                                                                              tGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTcc                                                                               >  2:1065497/1‑239 (MQ=255)
                                                                                                                                                                 tGTTGGTGTCGCGCCGCCAGAAATCTTTGTGCAGGCGTTGCTTTCTG‑CAGGCTACTTTTACGCGGTTTACTAGGTCCCCTACAAACCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGc                                                                            <  2:257222/239‑1 (MQ=255)
                                                                                                                                                                 tGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGc                                                                            <  2:48895/239‑1 (MQ=255)
                                                                                                                                                                 tGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGc                                                                            <  2:1086942/239‑1 (MQ=255)
                                                                                                                                                                 tGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGc                                                                            <  2:1135400/239‑1 (MQ=255)
                                                                                                                                                                    tgggggcgggccgtcAAAAGTCTTGTTGCAGGCGTTGCTTGCTG‑CGGGCTTCTTCTACGCTGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCtt                                                                          <  1:787802/229‑1 (MQ=255)
                                                                                                                                                                    tGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCtt                                                                          <  2:121321/238‑1 (MQ=255)
                                                                                                                                                                    tGGGGTCGCCCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTAGG‑CGGGCTGCTTCTACGCGGTTTCCTATGTCACCGACAAAACCCGCCTACGCAAACGCGTTGCTGATGTGCCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCtt                                                                          <  2:761619/238‑1 (MQ=255)
                                                                                                                                                                     ggTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTaa                                                                        <  1:134451/239‑1 (MQ=255)
                                                                                                                                                                     ggTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTaa                                                                        <  2:1100853/239‑1 (MQ=255)
                                                                                                                                                                           gcgcCCCCCGAAATCTTGTTTCAGGCGTTCCTTTCTG‑CGGTCTGCTTCTACGCGGTTTCCTATGTCCCCTACAAACCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTa                                                                  <  1:1112843/239‑1 (MQ=255)
                                                                                                                                                                               ccccAGAAATCTTTTTCCAGGCGTTGCTTTCGG‑GGGGCTGCTTTTACGCGGTTTACTATGTCCCCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGt                                                              <  2:243037/237‑1 (MQ=255)
                                                                                                                                                                                                  ggCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGAt                                                                                                                                          >  2:153268/1‑144 (MQ=255)
                                                                                                                                                                                                  ggCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAg                                           >  2:1169030/1‑239 (MQ=255)
                                                                                                                                                                                                  ggCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTAATATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGAt                                                                                                                                          <  1:153268/144‑1 (MQ=255)
                                                                                                                                                                                                      ttGCTTCCTG‑CGGGTTGCTTCTCCGGGGTTTCCTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGtct                                        <  1:773739/238‑1 (MQ=255)
                                                                                                                                                                                                       tGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTcc                                      >  2:674065/1‑239 (MQ=255)
                                                                                                                                                                                                        gCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCg                                     >  2:659694/1‑239 (MQ=255)
                                                                                                                                                                                                           ttCTG‑CGGGCGTCTTCTACGCGGTTTACTATGTCACCTACAAATCCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCggcg                                  <  1:741005/239‑1 (MQ=255)
                                                                                                                                                                                                           cgcTG‑CGCGTTGCTTCTCCGGGGTTTCCTATGCCACCGACAAACCCCTCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCggcg                                  <  1:604493/237‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCtttt             >  1:889764/1‑238 (MQ=255)
                                                                                                                                                                                                                                  gTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCtttt             >  1:561342/1‑238 (MQ=255)
                                                                                                                                                                                                                                   tttACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGaa                                            >  1:1026601/1‑206 (MQ=255)
                                                                                                                                                                                                                                   tttACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGaa                                            <  2:1026601/206‑1 (MQ=255)
                                                                                                                                                                                                                                   gttccTATCTCACCAGAAAAGCCCGCCTACGCACTCGCGTTGCTGAGGTACGGCGCCGTCCGCTGTTTACCATGACCCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAATCGTCGGCATCTTCTGCATGCTCAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCATATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAATACGCTTCATTTa            <  1:814816/234‑1 (MQ=255)
                                                                                                                                                                                                                                           gTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCAtct                                                                                                             >  2:1031175/1‑133 (MQ=255)
                                                                                                                                                                                                                                           gTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCAtct                                                                                                             <  1:1031175/133‑1 (MQ=255)
                                                                                                                                                                                                                                             cACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACcgcg                                                                                                                                                                                                   >  2:57168/1‑45 (MQ=255)
                                                                                                                                                                                                                                             cACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTc                                                                                                                    >  2:950484/1‑124 (MQ=255)
                                                                                                                                                                                                                                             cACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCTTTTACTTTTTCATc  >  2:706061/1‑238 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
CTGTTTGTTGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTG‑CGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCTTTTACTTTTTCATC  >  NC_000913/3978624‑3979097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A