Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,325,991 |
A→G |
12.4% |
S416G (AGT→GGT) |
yciQ → |
enhancer of membrane protein expression, putative inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,325,991 | 0 | A | G | 12.4%
| 191.3
/ 2.2
| 83 | S416G (AGT→GGT) | yciQ | enhancer of membrane protein expression, putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (17/52); new base G (8/3); total (27/56) |
| Fisher's exact test for biased strand distribution p-value = 3.02e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AGGCGCGACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGG > NC_000913/1325753‑1326226
|
ttaagggacaggAAAAAATGGGGTTTTGCTGGCCGGAGGGCAGTTATTACGGGAAGCGTTATTTCGGAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 2:1197800/228‑1 (MQ=255)
aggggggACCAAAAATAATGCGGTATTACCGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCA‑TTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 2:341777/232‑1 (MQ=255)
aGGCGCGTCCAGAAATAATGCGGTATTTCTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 1:1094670/239‑1 (MQ=255)
aGGCGCGACCAGAAATAATGCGGTATTGCTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 1:420651/239‑1 (MQ=255)
gggccgtccAGAAATAATGGGGTATTACTGCCCGGAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGGAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 2:964111/231‑1 (MQ=255)
ggCTCGACCAAAAATAAGGCGGTATTCCCGCCCGCAGAGCAGTTATTACTGGAAGGGTTATTTCGTAAAGGCGATAAGGTCGTGCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 2:789848/238‑1 (MQ=255)
gcccgagccgaacaaatGCGTTATTTCCGCCCGCAGCGCAGTTATTGCTGGAAGCGTGATTGCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGTCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACTGTAACTTGa < 2:1051386/223‑1 (MQ=255)
gACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAACAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGCCTGGCAGTATTGGCGGGCATTTTTTTCGGGAAATTGTGGCCtt > 1:1378386/1‑238 (MQ=255)
cgaaattgaggtgTATTACTGCCCGCAGAGGTGTTATTCATGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGGGACGCAACAGAGTTTTACGCAGGGCATTTTTTCGGATGCAGAAATTTTTTC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAgg < 2:1345177/227‑1 (MQ=255)
aattatGCGGTATTACTGCCCGCAGGGCAGTTATTACTGGAATCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGc < 1:1035496/237‑1 (MQ=255)
aataatGCTGTATTACTGCCCGCAGAGTAGTTATTACTGGAAGCGGTATCTCGTAAAGGCGATAAGGTAGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATCTTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAgg < 1:712855/236‑1 (MQ=255)
tatGCGTTTTTACTGCCCGAGGGGCATGTATTACTGGAAGCGTTTTGTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGc < 2:1159985/238‑1 (MQ=255)
tatGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGc < 1:21172/238‑1 (MQ=255)
tGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTCGGTGAATTTGGTCCTGTAGGCTGGGCAg > 1:82226/1‑239 (MQ=255)
tGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGCCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGCAATTTTTTC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCCTTCTTTTCGTTAACTTGGGTACTGtggtggcgggag > 2:1018019/1‑228 (MQ=255)
ggTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAgg < 1:459726/228‑1 (MQ=255)
tgtttatttcccGGAGGGCAGTTATTACTGGAAGCGTTTTTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGaa < 2:174883/229‑1 (MQ=255)
gTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCCTTCTTTTCGGTCACTTGGGTCCCTTATGATGGGCGGGGAt > 1:1159985/1‑239 (MQ=255)
gTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTTTTTTCGGTAACTTTGGTCCTTTTGGcctgtccctttt > 1:1197800/1‑228 (MQ=255)
gTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTCGGTAACTTTAGGCCTTTAGGCTGGGCAGGAAt > 1:542603/1‑239 (MQ=255)
gTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGGCATTTTTTTCGGTAACTTGAGTCCTGTGGGCTGGGCCGGAAt > 1:238054/1‑239 (MQ=255)
gCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCtgg < 1:97282/239‑1 (MQ=255)
cGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCACTATTGGCGGTCATTCTTTACGGGTACTTAGGTCCTGTTGGCTGGGCAGGGATGA‑GTCtgggtg > 1:634105/1‑236 (MQ=255)
cGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCCTTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGGAGGA‑GGCtggtgg > 1:27792/1‑239 (MQ=255)
gcttttttttttGGAGGTGTTTTTTCGTAAAGGCGTTAAGGTCTTTCTTACGTGGAGACCTAACAGTGTCTTTCGCAGGGCATGTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGTAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGat < 2:556157/227‑1 (MQ=255)
gCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGat < 1:247555/238‑1 (MQ=255)
gCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGat < 1:665050/238‑1 (MQ=255)
gCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGa < 1:473967/237‑1 (MQ=255)
aGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAAATTGAGTCCTGTTGGCTGGGGAGGAATGA‑GGCTGGGGGGCGctatt > 1:375078/1‑238 (MQ=255)
aGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGACTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACGAGCAATATTGGCGTGCATTTTTTTCGGTAAATTGGGTTCCCTGGGCCGGGGAGG‑ATGAGGTCTTGTggggggattg > 2:1243188/1‑232 (MQ=255)
ttttttaATGGATGTGTTTTTTTGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGt < 2:27792/235‑1 (MQ=255)
ttttttcTGGAAGCGTTTTTTAGTAAAGGGGATAAGGGCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGGGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGt < 2:82226/232‑1 (MQ=255)
ttattaCTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 1:1211223/196‑1 (MQ=255)
aaGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTTATTCTTTTATGTAAATTTGATCCTGTAGGCCGGGCAGGAATGA‑GACTGTGGGGCggaagggtttttttgt > 1:518591/1‑222 (MQ=255)
aaGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCACTCTTTCCGGTAACTTGAGTGCTTTATGCTGGGCCGGAGGTG‑GTCTTGTGGGGGAGAtttttt‑tttttt > 2:699715/1‑233 (MQ=255)
tttttttCTTAAAGGCGATAAGGTTGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATctg < 2:1012977/233‑1 (MQ=255)
gTTATTTCGTAAAGGCGATAAGGTCTTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATctg < 1:485584/237‑1 (MQ=255)
gTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAAAAGAGCCTTACGCATGGAATTTTTACGGATGCAGAAAGTTTATC‑TGACGCGTAAAAAGTCTTCTTTTTACCGGTCTGATTCTTTTTTGAAATGGGGTGGAGTGGGAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAAGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATctg < 1:1133836/237‑1 (MQ=255)
ttCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa > 1:148081/1‑177 (MQ=255)
ttCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 2:148081/177‑1 (MQ=255)
aaaGGCTGTTAGGTCTTTTTTACGGGGAGACGCAACAGGGTTTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTcc < 2:634105/239‑1 (MQ=255)
gCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGACATTCTTTACGGTAACTTGAGTCCTGGTGGCTGGGCCGGAATTA‑GGCTGGTGGGCGCATTGGTTT‑TTATGATCTGCTGG‑GTTATTCCtttt > 1:393536/1‑239 (MQ=255)
tCGTTTTTACGGGGAGACCCAAGAGATGTTTACGCAGGGTATTTTATCGGAAGCAAAAATTTTGTG‑TGCCGCGTAAAAAGTCGTCGTTTTGCCGGTCTGGTACGTTTTTGCAATGGTGTGGAGTGGGAAGATTGGCGGTCATTCTTTACGGTAGCTTGAGTCCTGTAGGCTGGGCAGGAATTA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTGTTTTATTTTg < 2:457390/238‑1 (MQ=255)
tgTTTTTACGGGGAGGCGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑t < 1:1351370/237‑1 (MQ=255)
cGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTTTTTACGGGAACTTTAGTTCCGTAGGGTGGGGCGGAATGG‑GTCTGGTGGGCGGTTTGTTTA‑TTTTGATCTGTTGG‑GTTTTTCCTtttttttttttt > 1:137367/1‑236 (MQ=255)
tttcttcCGGGGAGACGCAACAGAGTTTTACGCAGGGCATTTTTACTGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTGACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑tt < 1:287445/237‑1 (MQ=255)
tttcgggggagtggaaCAGATTGTTACGCAGTTCATTTTTACGGATGCGGAAATTTTCTC‑GGCCGAGTAAAAAGTCTTAGTTTTGCCTGTCTGATACTTTTTTGCCATGGGGTGGGCTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCtt < 2:1062324/225‑1 (MQ=255)
aCGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGGCCTTCTTTTAGGTAACTTTAGTCCTGTAGGCTGGGGAGGAAAGG‑GTCTGGGGGGGGGTATGTTTT‑TTTTTTTTTGCTGG‑GGTTTTTCTTTTTTATTTTT‑TTTCCtttgtgtttttt > 2:1056856/1‑229 (MQ=255)
aaCAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTccc < 1:670731/223‑1 (MQ=255)
gttttACGCGTGGCTTTTTTACGGTTGCGGAAATTTTATC‑TGCCTGGTAAAAAGTTTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGATTCCTGTAGGCTGGGCAGGAATGA‑GTCTTGTGGGCGATATGTTTA‑TTATGAGCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCga < 2:820323/236‑1 (MQ=255)
gTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCcgcg < 1:1243188/238‑1 (MQ=255)
cTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGTGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTAGGTAACTTGAGTCCTGTAGGACGGGCAGGGATGA‑GTCTGGGGGGGGGTATGTTTA‑TTTTGATCTGCTGG‑GTTATTCCTTTTTTTTTTTT‑TTGCCTTGTGCTTTTGTTTTCCCGCgatg > 1:82059/1‑239 (MQ=255)
tACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGGGGGGGATATGTTTT‑TTATGTTCTGCTGG‑GTTATTCCTTTTTTATTTTG‑TTCCCTTTGGCTTTTGTTTTCCCCCgctggt > 1:1232472/1‑237 (MQ=255)
gCAGGGCTTTTTTTCGGAGGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTGCCGGTCTGATGCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGAc < 2:393536/239‑1 (MQ=255)
ccAGGGTATTTTTTCGGATGCAAAAATTTTATC‑TGCCGGGTAAAAAGTTTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTCTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGAc < 2:525296/238‑1 (MQ=255)
aGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTTAGTCCTGTAGGCTGGGCAGGGATGA‑GTCTGTGGGGGGGTATGTTTA‑TTTTTTTTTGCTGG‑GTTTTTCCTTTTTTATTTTT‑TTTCCTTTGGCTTTTGTTTTTCCCCgttgattgcaa > 1:1313405/1‑234 (MQ=255)
gggaTTTTTAGTGAAGCAGAAATTTTAGCATGATG‑GTAAAAAGTCTTTGTTTTACCGGTTTTATCCTTTTTTGCATGGGGGTGGATTGGCAATATTGCCGTTCATTCGTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTTGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTAGTTTG‑TTCCATTGAGCGTTTGTTTGCCCTCGATGATGACAAGc < 2:938930/236‑1 (MQ=255)
ggCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTTTTTTCGGTAACTTTTGTCCTGTAGGGTGGGCAGGGATGA‑GGCTGTTGGGCGATATTTTTA‑TTTTTGTCTGCTGG‑GTTTTTTCTTTTTTTTTTTG‑TTCCCTTTGGCttttttttttccccggagttggaaaa > 2:457626/1‑220 (MQ=255)
ggCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTCTGTAACTTGAAGCTTGTCGGCATGGCAGGGATGA‑CTCTGGGGGGCGATAGGTGTATTTTTTATCT‑CTGG‑GTTCTTTCTTTTTTTTTTTT‑TTTCGCTTCGGTTTTGTTTTTCcgcggcgtgtataag > 2:255897/1‑227 (MQ=255)
ggCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGGAACTTTAGTCCTGTAGGCTGGGGCGGGATGA‑GGCTGGTGGGCGGTATGGTTT‑TTATGATCTTCTGG‑TGTATTCCTTTTTTTTTTTGTTTCCTTTGAGTTTTTTTTTccccccaggaagaagaa > 2:229154/1‑225 (MQ=255)
cATTTTTACGGATGCATAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGcc < 1:1056856/238‑1 (MQ=255)
ctttttccgggagcaatagttttATT‑CGCCGGGTAAAAAGTCTTCGTTTTACCGGTCTGGTACTTTTTTGCAATGGGGTGGTCTGGCAATATTGGCTGTCGTTCTTTTGGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCt < 2:651623/219‑1 (MQ=255)
aTTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGGCTTCGTTTGACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCGTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCt < 1:842242/238‑1 (MQ=255)
cGGATGCAGAAATTTTATT‑GGCCGGGTAAAAAGGCTTCGTTTGACCGGTCTGATAGTTTTTGGCAATGGGGTGGACTGGCAATATTGGTGGTCATTCTTTACGGTAACTTGAGCCCTGTAGGCTGGGCAGTAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTaa < 1:1218577/239‑1 (MQ=255)
cGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTaa < 1:69487/239‑1 (MQ=255)
attttgcttttAAAAAGTTTTCGTTTTACCGGGTTGATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACt < 2:82059/229‑1 (MQ=255)
tAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGa < 1:350111/86‑1 (MQ=255)
aaaaGTCTTCGTTTTACCGGTCTGATACTTTTGTGCAATGGGGTGGACTGGCAATATGGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑Ca < 1:783495/239‑1 (MQ=255)
tCTTCGTTTTACCGGTTTGATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGGGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGAt < 2:365066/239‑1 (MQ=255)
cTTCGTTTTGCCGGTGTGATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGAt < 1:511196/238‑1 (MQ=255)
aCCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGCCATTTTTTTCGGTTACTTGAGTTCCTTAGGCTGGGCCGGGAAGG‑GTCTGGTGGGCGTTTTGTTTT‑TTTTGATCTTCTGGTTTTTTTCCTTTTTTTTTTTT‑TTCCTTTTGGTTTTTTTTGGCCCCCG‑TGTTTGCAAGCCTTGCCGTTAAT‑GTTTAATTCTCCCCTTTGTTTTT‑C‑CACTTGATTTGtcaggg > 2:531993/1‑234 (MQ=255)
ggTTTGATTCTTTTTTGGAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAAGGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTg < 1:12992/239‑1 (MQ=255)
tCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGc < 1:278239/181‑1 (MQ=255)
gATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACGTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTGTAC‑CAC‑TGATTTGTTCAGGCGTGGCCtt < 1:531993/239‑1 (MQ=255)
ttttttTGAATGGGGTGGGTTGGCATTTTTGGGGTTCTTTCTTTACGGTAACTTTGGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGATAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTAtt < 2:542603/239‑1 (MQ=255)
ttttttTCCATTGGGTGGACTTGGTATTTTTGCGGGGTTTCTTTACGGTACCGTGAGTCCTGTAGGCTGGGCAGGAATGA‑TTCTGTGTGGCGATATGTTTA‑TTATTATCTGCGGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TTATTTGTTCAGGCGTGGCCTTCTAtt < 2:433662/239‑1 (MQ=255)
ttttttGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTAtt < 1:1018019/239‑1 (MQ=255)
ttttttGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTAtt < 1:140284/239‑1 (MQ=255)
ttttttGCAATGGGGTGGACTGGAAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTAtt < 1:425771/239‑1 (MQ=255)
tttttgTCAGTGGGGTGGGATGGCAATATTGGGGGGTATTTTTTACGGTAACTTTGGTCCTGTAGGGTGGGCAGGAATGA‑GTTTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTAtt < 2:862397/239‑1 (MQ=255)
ttttGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTTCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAACCTTG‑CGTTTATCGTGTAA‑TCATCACTTTTTTTTTAC‑CAC‑TGATTTTTTCAGGCGTGGCCTTCTTTtct > 1:373936/1‑239 (MQ=255)
gCAATGGGGTGGACTGGCAATATTGGCGGTCATTTTTTTCGGTAACTTGAGTCCTGTAGGCTGGGCAGGGATGA‑GGCTGGGGGGGGATATGTTTA‑TTATTATCTTCTGG‑GTTATTTCTTTTTTATTTTT‑TTTCCTTTGGCTTTTTTTTTCCCGCGTTGATGACAAGCCTTT‑TGTTAATCTTGTAA‑TTATTCCTTTTTTTTTTC‑CCC‑TCTTTTTTTTTGGGGGGGGCTTTTTTTctctct > 2:1076287/1‑239 (MQ=255)
tGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTCTGTAACTTTGGTCCTGTAGGGTGGGCAGGGATGA‑GTGTTGTTGGGGGTATGTTTA‑TTTTGATCTGCTGG‑GTTATTCCTTTTTTTTTTTT‑TTCCCTTTCGCTTTTTTTTTCCCGCTGTGTTGACAAGCCTTG‑CGTTATTCTTGTTA‑TCATCACTTTGTTTTTACACAC‑‑GATTTTTTTAGGCGTGGCttttatttttctctcat > 2:140284/1‑224 (MQ=255)
tGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACAt < 1:1076287/239‑1 (MQ=255)
tGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACAt < 1:1130037/239‑1 (MQ=255)
ggCATTTTTGGCGGTCATTTTTTACGGTAACTTGGGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGgag < 2:373936/239‑1 (MQ=255)
atttttgcgtgctttttttACGGTAACTTGAGTCCTGTAGGCTGGGGAGGAATGG‑GTCTGGTGGGCGATATGTTTA‑TTATTATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGt < 2:137367/223‑1 (MQ=255)
ggCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCt < 1:640718/239‑1 (MQ=255)
tCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTa < 1:255897/238‑1 (MQ=255)
cATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTAc < 1:457626/238‑1 (MQ=255)
cATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTAc < 1:229154/238‑1 (MQ=255)
ttGTGTCTTGTGGGCTTGGCAGGAAGTG‑GTTTGGTGGGGGATTTGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCggg < 2:1232472/239‑1 (MQ=255)
tGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CCC‑TGATTTGTTCAGGCGTg > 2:1221662/1‑176 (MQ=255)
tGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTg < 1:1221662/176‑1 (MQ=255)
|
AGGCGCGACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATC‑TGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGA‑GTCTGGTGGGCGATATGTTTA‑TTATGATCTGCTGG‑ATTATTCCTTTTTTATTTTG‑TTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTG‑CGTTAATCGTGTAA‑TCATCACTTTGTTTTTAC‑CAC‑TGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGG > NC_000913/1325753‑1326226
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
