Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,833,714 T→G 11.9% T275P (ACT→CCT)  yicI ← putative alpha‑glucosidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,833,7140TG11.9% 322.6 / 2.5 142T275P (ACT→CCT) yicIputative alpha‑glucosidase
Reads supporting (aligned to +/- strand):  ref base T (66/52);  new base G (11/12);  total (78/64)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 142 total aligned reads displayed.

GACCGATATAGGGGTTAATCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGTTAGTCATGTAGAACGGGATAT  >  NC_000913/3833483‑3833950
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                             
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCCAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCGGTTTACCTCCGCTTCGTCGGCGTTGGGGGGAAAAGAAGGGGTTAGCCAAAGGCCGAAGGAcc                                                                                                                                                                                                                        >  2:132664/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGTTAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGAGGTAAATGAAGTGGTAAGCCACAGGCCGAAGGAcc                                                                                                                                                                                                                        >  1:542445/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGCTAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGAcc                                                                                                                                                                                                                        >  1:728154/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGTTGGTAAAGGAAGGGGTTAGCCACAGGCCGAAGGAcc                                                                                                                                                                                                                        >  1:1217819/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTCGCCCCAGGCCGAAgggc                                                                                                                                                                                                                         >  1:338717/1‑236 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAgg                                                                                                                                                                                                                                  >  1:355091/1‑229 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGAcc                                                                                                                                                                                                                        >  1:954290/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGAc                                                                                                                                                                                                                         >  1:146691/1‑238 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGAAAATGAAGTGGTTAGCCACAGGCCGAAGGAc                                                                                                                                                                                                                         >  1:222583/1‑238 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGGCGCTTCTTCGTAGATGGTGGCAAATGAAGGGGTTAGCCACAGGCCGAAGGAcc                                                                                                                                                                                                                        >  1:24433/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCAATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGAAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGAcc                                                                                                                                                                                                                        >  1:1357524/1‑239 (MQ=255)
                aaTCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGACGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGCAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGATTTGTCGTGCTTGGTGGGAAATGAAAGGGTTAGCCACAGCCCCAAgccc                                                                                                                                                                                                                         >  1:515032/1‑235 (MQ=255)
                       aCGCGGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAACTGAAGTGGTTAGCCCAAGGCCGAAGGACCACggggg                                                                                                                                                                                                                 >  2:432777/1‑239 (MQ=255)
                       aCGCAGATTTTCAGTCCTCTCGCTTTCAAGCGGCGGATCATCCCTTCCGGGTCAGGGCAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAGACTGGAAAACATGCAGTGGCCGGTTTCGTTCCGCCATACAATCGATAACAGC‑GTTTACCGTCGCTTGCCCGGAGTTGGTGGAAAAAAAAGTGGTTAccccaaagacccaagaacaccgggg                                                                                                                                                                                                                 >  2:1292848/1‑217 (MQ=255)
                            gATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACCCGGGCGGCa                                                                                                                                                                                                            >  1:1268951/1‑239 (MQ=255)
                                     tCCTTTCGTTTTCAGGGGGCGGACCCTCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAACCCCCCCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGgac                                                                                                                                                                                                  <  2:964065/239‑1 (MQ=255)
                                       cTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCca                                                                                                                                                                                                                                      >  2:1079339/1‑202 (MQ=255)
                                       cTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCca                                                                                                                                                                                                                                      <  1:1079339/202‑1 (MQ=255)
                                         ttCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGAcc                                                                                                                                                                                              >  1:780684/1‑239 (MQ=255)
                                         ttCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGGGGTAACTGAAGGGGTTAGCCACAGCCCGAAGGCCCACTCGGGCGGGAGCG‑CCGgacggac                                                                                                                                                                                              >  2:749107/1‑236 (MQ=255)
                                            gCTTTTGGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCATTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGt                                                                                                                                                                                           <  1:940905/239‑1 (MQ=255)
                                                 cAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGc                                                                                                                                                                                      >  1:1218496/1‑239 (MQ=255)
                                                         ggATCTCCCCTTCCGGGTCGGGGAAAGTCACCGGG‑TCCCACACAAAACCGCCCCATGGGAAGGCTTTACTCCAGAAACAGTAAAAGTGGAAACGATGCAGTGGCAGATTTCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATaa                                                                                                                                                                              <  2:686741/239‑1 (MQ=255)
                                                          gatccccccTTACGGGTCAGGGAAAGTCGAGGGG‑TCCCACAAAAAACCCCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGGGGAAAACATGCAGGGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATaa                                                                                                                                                                              <  2:260610/232‑1 (MQ=255)
                                                                     cggtgTCTGGGAAAGTCCGGGGG‑TCCCACTAAAAAACGCACCCTTGGAGGGCTTTCAACCAAAAACAGTCAAAGTGGAAAACCTGCAGGGGCAGATGGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTAcc                                                                                                                                                                  <  2:75436/235‑1 (MQ=255)
                                                                     ccGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAACTGAAGTGGTTAGCCACAGGCCGAAGGACCACCCGGGGGGCAGCG‑CCGGCGGGCCAGCAAAGCGGGTATAACGATCAAGAAc                                                                                                                                                                   >  2:56619/1‑238 (MQ=255)
                                                                           ctgggAAAATCGGCGGGCTCCCA‑TCAAACTCGCCACGCTTGAAGGTTTTCAACCAAAAAACATAAAAGTGGAAAACATGCAGCGGCGGTTTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCttt                                                                                                                                                             <  2:542445/236‑1 (MQ=255)
                                                                           cAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGGGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCAAGCGGGCGGCGGGG‑CCGGGCGACAAGTAAAGCggggaaaaagaaaaaaaacagctttc                                                                                                                                                            >  2:818696/1‑216 (MQ=255)
                                                                                   gTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGGATAACGATCAAGAACGGCTTTCGGCGTCgg                                                                                                                                                    >  1:912969/1‑239 (MQ=255)
                                                                                     tttaaggaccagaCTAAAAATCGCCCCACGGGAAGGCTTTCCACCAGAAACAGGCAAAGGGGAAAACTTGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCggg                                                                                                                                                   <  2:611486/227‑1 (MQ=255)
                                                                                        cGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCCTTCGGCGACGGGCCg                                                                                                                                                >  1:853980/1‑238 (MQ=255)
                                                                                              ccccCTAAAACTCGCCCCCCGGGAGTGCTTTATCCCAAAAACAGTAAAAGGGGAAAACCTCGAGCGGACGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTGCCCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGAt                                                                                                                                           <  2:1232803/238‑1 (MQ=255)
                                                                                               ccACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCAAGCGGGCGGCAGAG‑CCCGACGCCCCGTAAACCGGGGAAAACGATAAGGAACCACTTTTGgggccgggccccggaaaa                                                                                                                                         >  2:1054025/1‑231 (MQ=255)
                                                                                                 cctcaaaacccacccccTGGAGGGTTTCCACCCAAAACCAGTCAAAGTGGAAAACTGGCAGCGGCAGTTTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACa                                                                                                                                       <  2:967088/223‑1 (MQ=255)
                                                                                                 acacAAAACCGCACCCCTGGAAGGCTTTCAGCAAGAAACAGTAAAAGTGGAAAACAGGCGGGGGGAGGTCGCGTTCCGACAGACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACa                                                                                                                                       <  1:432777/236‑1 (MQ=255)
                                                                                                   tCAAAATCGCCCCCCTGGAAGGCTTTCATCCAGAAACAGTCAAAGTTGAAAGCCTGCAGCTGTAGATTGCGTTCCGCCATACCATCGATAA‑ATCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGGCCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACaaa                                                                                                                                     <  1:551654/239‑1 (MQ=255)
                                                                                                       aaTCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCGGAAGTACCACGCGGGCGCCACGG‑CCGGACGGCCCACAAAACGGGGAAACAGACCAAAAACCCGTTTCGGCGTCGGGcctcggaaaccaaacaat                                                                                                                                 >  2:282999/1‑223 (MQ=255)
                                                                                                       aaTCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGGGGGTAGCCACAGGCCGAAGGACCACGCGGGGGGCAGAC‑CCGGACGACCAGTAAAGCGGGCATAAAGAGCAAGAACCGCTTTCGGCGCCGGGCCGGCGCAAAAAAAgaaa                                                                                                                                 >  2:1355109/1‑236 (MQ=255)
                                                                                                           ccccccttGGAAGGCTTTCATTCAAAAACGTTCAAAGTGGAAACCTTGCCGCGGGCAATTGCGGTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCCGTTCGTCGTAGTTGGTGGTAAATGAAGGGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCga                                                                                                                             <  2:626798/232‑1 (MQ=255)
                                                                                                                         cTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACAATTAAAGCGGGGAAAACGATCAAGAACCCCTTTCGGGGTCGGGCCGTCGTTAGCAAAGAATTCGAGAAATTCAC‑CTCaa                                                                                                              >  2:1350575/1‑239 (MQ=255)
                                                                                                                           ttCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCaa                                                                                                              >  1:1043443/1‑238 (MQ=255)
                                                                                                                            tCATCCAGAAACAGTCAAAGGCAAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGGCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACg                                                                                                            <  2:414849/239‑1 (MQ=255)
                                                                                                                            tCAGCCAGAAACAGTCAAAGTGGAAACCATTCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTTTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGATCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACg                                                                                                            <  1:398423/239‑1 (MQ=255)
                                                                                                                                  aGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGAATTCGAGATATTCACTCTCAACGCTGAAc                                                                                                      >  1:331221/1‑239 (MQ=255)
                                                                                                                                   gAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGGATAACGATCAAGTACCGCTTTCGGCGGCGGGCCGTCGATAAAAAAGGATTCggagaaataaccctcaacccgga                                                                                                        >  2:196272/1‑214 (MQ=255)
                                                                                                                                          tCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGAG‑CCGGACGACCAGTAAAGCGGGCATAACGATCAAGAACCGCTTTCGGCGTCGGGCCGTCGATAACCACAGATTCGGGATAATCACTCCAACCGCTGAACTgacattt                                                                                              >  2:108420/1‑233 (MQ=255)
                                                                                                                                            aaaGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGCCGATAACAAAGTATTCGAGGTATTCAATCTCAACGCTGAACTGCACTTTgg                                                                                            >  1:1312521/1‑239 (MQ=255)
                                                                                                                                              aGTGGAAAACATGCAGCGGCAGATTGCGTTACGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATAAAGAGGTTAGCCACAGGCCGAAGGACCACCCGGTCGGCAGCG‑CCGGACGACCCATAAAGAGGGAAAAACGATCAAGCACCGCTTTCGGCGTCGGGCCGTCGAGAACAAAGAAATCAGAATAATCACCTACAAAACAGAACGGCACTTTGgaa                                                                                          >  2:502994/1‑238 (MQ=255)
                                                                                                                                                  gAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCg                                                                                                                                                        >  2:263015/1‑173 (MQ=255)
                                                                                                                                                  gAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCg                                                                                                                                                        <  1:263015/173‑1 (MQ=255)
                                                                                                                                                    aaaCATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGAATTCGAGATATTCACCTTCAACGCTGAACTGCACTTTGGGGACttt                                                                                     >  1:1272830/1‑238 (MQ=255)
                                                                                                                                                            gccggaattttGGGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGGTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATcc                                                                            <  2:471269/230‑1 (MQ=255)
                                                                                                                                                            aGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAg                                                                                                                                                                                       <  2:93749/132‑1 (MQ=255)
                                                                                                                                                                gCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATaa                                                                                                                                         <  2:61878/174‑1 (MQ=255)
                                                                                                                                                                gCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATaa                                                                                                                                         >  1:61878/1‑174 (MQ=255)
                                                                                                                                                                    gttGCGTTCCCTCATTTCCTTGATAT‑AGCTGTGTTCCTTTGTTTCGTCGTGGTTGGGGGTAAAATGAGTGGTTAGCCACAGGCCCAAGGACCAAGCGGGCGGCAGCG‑CCGGACGCCCAGGAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCaa                                                                    <  2:24433/238‑1 (MQ=255)
                                                                                                                                                                    gtcggatgtttttaagaggaagATAA‑AGCTGTTTACGGTCGTTTCGTCGTAGTTGGTGGTAAATGAAGGGGTTAGCCGCAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCaa                                                                    <  2:1355152/218‑1 (MQ=255)
                                                                                                                                                                     ttGCGTGCCGCCAGACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAAGGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCaa                                                                    <  1:273117/238‑1 (MQ=255)
                                                                                                                                                                          ttCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTGCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAagag                                                               <  1:364103/238‑1 (MQ=255)
                                                                                                                                                                          ttCCCCCCTTCCATCGATAA‑AGCTTTTTTCCGTCGCTTCGTCGGAGTTGGGGGTAAATGAAGGGGGTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAgaga                                                              <  2:1157429/239‑1 (MQ=255)
                                                                                                                                                                          tcccccctaaCCATCTATAA‑AGTTTTTTTCCGTCGTTTCGGCGTAGGTGGTGGTAAATGAAGGTGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAgaga                                                              <  2:728154/230‑1 (MQ=255)
                                                                                                                                                                           tccgcgagttccactaTAA‑CGCTGTGTACCGTCGCGGCGTCGTTGTTGGTGGGAAATGAAGTGGGTAGACACAGGCCGAAGGACCAGGCGGGCGGCAGCG‑GCGTACGTGCAGTAAAGCGGGGAGAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACGTTGGAGACTTTCTCCGATCCCACTTCAAAAgaga                                                              <  2:1071602/223‑1 (MQ=255)
                                                                                                                                                                            ccccactcacATTGATAA‑AGTGTTTTACCGTCCCTTCGGCGTAGTTGGGGGTAAAGGAAGGGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGaca                                                            <  2:146691/230‑1 (MQ=255)
                                                                                                                                                                              gCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGacaca                                                          <  1:749107/239‑1 (MQ=255)
                                                                                                                                                                              gCCATACCATCAATAA‑AGCGTTTTACCGTCGGTTCGGCGGAGTTGGGGGGAAATGAAGGGGTTAGCCAGAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATAGTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGacaca                                                          <  2:3291/239‑1 (MQ=255)
                                                                                                                                                                                ctttccctCGATAA‑AGCTGTTTCCCGGCGCTTGGTCGTGGGTGGTTGTAAATGAAGGGGTTAGCCACAGGGCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACTAGTAAAGCGGGTATAACGAGCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACt                                                        <  2:1268951/232‑1 (MQ=255)
                                                                                                                                                                                cATTCCATCGATTA‑AGCTGTTTACCGGCGCTTCGTGGTATGTGGGGGTAAATGAAGGGGTTAGCCCCAGGCCGAAGGCCCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACt                                                        <  2:912969/239‑1 (MQ=255)
                                                                                                                                                                                  tACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGGCGATAACAAAGGATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAACGACACCCTgg                                                      >  1:665883/1‑239 (MQ=255)
                                                                                                                                                                                   tccAGCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTggg                                                     <  1:234598/238‑1 (MQ=255)
                                                                                                                                                                                   aCCATCGATAA‑AGCTTTTTCCCGGCCCTTCGTCGGAGTTGGGGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTggg                                                     <  2:297574/239‑1 (MQ=255)
                                                                                                                                                                                   aCCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTggg                                                     <  1:332306/239‑1 (MQ=255)
                                                                                                                                                                                   aCCAGCGATAA‑AGCTTTTTCCCGTCGCTTCGGCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTggg                                                     <  1:721674/239‑1 (MQ=255)
                                                                                                                                                                                       tCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTc                                                                                                                      >  1:1295973/1‑170 (MQ=255)
                                                                                                                                                                                       tCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGgatg                                                 >  1:284807/1‑239 (MQ=255)
                                                                                                                                                                                       tCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAAAGACAAACAgggggga                                                 >  2:334808/1‑236 (MQ=255)
                                                                                                                                                                                         gATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGgaggat                                               >  1:297574/1‑239 (MQ=255)
                                                                                                                                                                                         gATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAACG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCCTCGGGCCGTCGATAACAAAGGATTCGAGATCTTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTTCGATCCCACTTCAAAAAAGACACACAggggggagt                                               >  2:1223537/1‑234 (MQ=255)
                                                                                                                                                                                           tAA‑TGCTTTTTTCCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCCCAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGAtt                                              <  2:1186067/238‑1 (MQ=255)
                                                                                                                                                                                           tAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGAtt                                              <  1:1272133/238‑1 (MQ=255)
                                                                                                                                                                                             a‑aGCTTTTTCCCGTCGGTTCGGCGGTGTTGGTGGTAAAGGAAGTGGGTAGCCACTGGCCGAAGGACCCCGCGGGCGGCAGCG‑CCGGAAGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGAc                                           <  2:338717/239‑1 (MQ=255)
                                                                                                                                                                                             a‑aGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGCATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAAAAAAGTATTCGAGATATTCACTTTCAACGCTGCACTGCAATTTGGAGCCTTTCTCCGATCCCCCTTAAAAAAAGAAAAACCGGGGAGGATGGa                                            >  2:1311942/1‑238 (MQ=255)
                                                                                                                                                                                                  tttttCCCGTCGCTTTGTCGTAGTTTGTGGTAAATGAAGGTGTTAGCCAAAGGCCGAAGGACCACGCGGGCGGCAGCG‑GCGGACGACCAGCAAAGCAGGTATAACGATCAAGTCCCGCTTTCGGCGGCGGGCCGTCGACAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAg                                        <  2:346534/236‑1 (MQ=255)
                                                                                                                                                                                                  tttttACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACT‑GGGATGATTGACCAg                                        <  1:111115/235‑1 (MQ=255)
                                                                                                                                                                                                    tttACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTa                                      >  1:93/1‑238 (MQ=255)
                                                                                                                                                                                                    tttACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGGATTCGAGATATTCACTCTCAACGCCGAATCGCACTTTGGAGACTTTCTCCGATCCCCCTTCAAAAGAGacaaaacggggcagaaggcaccaaa                                      >  2:376832/1‑216 (MQ=255)
                                                                                                                                                                                                      tACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCGCAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCCCTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGacaca                                                          >  1:1355152/1‑216 (MQ=255)
                                                                                                                                                                                                      tACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCAATCCCCCTTCAAAAAAGAAACACAGGGGAGGATTGACCAGAAccc                                   >  2:587339/1‑239 (MQ=255)
                                                                                                                                                                                                           tCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGCTAACAAAGTATTCGAGACATTCACTCTCAACGCGGACCTGCACTTTGGGGACTTTCCCCCATCCACCTTCAAAACAGCCACACTGGGGGGGAttacccaaacacccaaac                              >  2:799839/1‑223 (MQ=255)
                                                                                                                                                                                                           tCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATa                               >  1:597535/1‑238 (MQ=255)
                                                                                                                                                                                                           tCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGAGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAAAGACACACTGGGGATGATTGACCAGTACCCCATa                               >  1:159714/1‑238 (MQ=255)
                                                                                                                                                                                                            cgcttctgtgtAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAAc                             <  2:331221/230‑1 (MQ=255)
                                                                                                                                                                                                              cTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCCTAAcc                            >  1:1087080/1‑238 (MQ=255)
                                                                                                                                                                                                                  gtcgtAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGt                       <  1:1054025/239‑1 (MQ=255)
                                                                                                                                                                                                                  ggcgtAGTTGGGTGTAAATGAAGGGGTTGGCCACAGGCCGAAGGACCACGCGGGCTGCAGCG‑CCGGACGACCAAGAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCCTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGt                       <  1:651226/237‑1 (MQ=255)
                                                                                                                                                                                                                  ggcgtAGTGGGGGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGt                       <  1:1223537/237‑1 (MQ=255)
                                                                                                                                                                                                                    cgtgtttGGTGGTAAATGAAGGGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGGAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGTTa                     <  2:1272830/234‑1 (MQ=255)
                                                                                                                                                                                                                             tggtAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCCCTCTCAACGCTGAACTGCCCTTTGGAGACTTTCTCCGATCCCCCTTCACAAGAGACACACTGGGGATGATTGACCCGTACCCCATAACCCAGGTTAGCCATGTAg            >  2:790292/1‑239 (MQ=255)
                                                                                                                                                                                                                                tAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACCAACTGGGTATGATTGACCAGTACCCCATAACCACGGTTAGTCATGTAGAAc         >  1:575809/1‑239 (MQ=255)
                                                                                                                                                                                                                                gaaaTGAAGTGGTTCCCCACAGGCCGAAGGACCACGCGGGCGGC‑GCGCCCGGACGACCAGTAAAGCGGGTATAACGAGCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTGTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGTTAGTCATGTAGaa          <  2:1087080/237‑1 (MQ=255)
                                                                                                                                                                                                                                       aGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGGTGATTGACCAGTACCCCATAACCACGGTTAGTCATGTAAAACGGGaaat  >  2:359008/1‑239 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                             
GACCGATATAGGGGTTAATCCAGACGCAGATTTTCAGTCCTTTCGCTTTCAGGCGGCGGATCATCCCTTCCGGGTCAGGGAAAGTCAGCGGG‑TCCCACTCAAAATCGCACCACTGGAAGGCTTTCATCCAGAAACAGTCAAAGTGGAAAACATGCAGCGGCAGATTGCGTTCCGCCATACCATCGATAA‑AGCTGTTTACCGTCGCTTCGTCGTAGTTGGTGGTAAATGAAGTGGTTAGCCACAGGCCGAAGGACCACGCGGGCGGCAGCG‑CCGGACGACCAGTAAAGCGGGTATAACGATCAAGTACCGCTTTCGGCGTCGGGCCGTCGATAACAAAGTATTCGAGATATTCACTCTCAACGCTGAACTGCACTTTGGAGACTTTCTCCGATCCCACTTCAAAAGAGACACACTGGGGATGATTGACCAGTACCCCATAACCACGGTTAGTCATGTAGAACGGGATAT  >  NC_000913/3833483‑3833950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A