Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,361,543 |
A→T |
11.6% |
D131E (GAT→GAA) |
cadC ← |
cadBA operon transcriptional activator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,361,543 | 0 | A | T | 11.6%
| 229.6
/ 3.5
| 86 | D131E (GAT→GAA) | cadC | cadBA operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base A (60/14); new base T (2/9); total (62/24) |
| Fisher's exact test for biased strand distribution p-value = 7.58e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
GTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGATTGGTGACAATACTTCTCTTCCAGACATTATCGAT > NC_000913/4361309‑4361776
|
gTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCtt > 1:1100135/1‑238 (MQ=255)
aCAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCCGGTGGCGTTGCGGGGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCtgtg > 1:841727/1‑238 (MQ=255)
aCAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGGGTTTTG‑AATTT‑TAA‑AACT‑GTGGGGTGGGGAATCTTTgg > 2:972652/1‑239 (MQ=255)
aaCTTTTTTTTACCATATTAATGTCAATATCGCGTGGATTGAAGAAAATACGCGATTTGCTCATAGGAAGGCGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCa < 2:1100135/239‑1 (MQ=255)
tatttaCCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGAGGGGTTTTG‑AATGT‑TAA‑GACT‑GGGGGAGGGGGATTTCGGGGCAGGAA‑cc > 1:508662/1‑239 (MQ=255)
tatttaCCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGAAACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCGGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑cc > 1:853202/1‑239 (MQ=255)
tCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGGGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GGGGGAGGGAGAATCTGTGGAAGGAA‑ACGCCCCTGGTAAAggggg > 2:782302/1‑239 (MQ=255)
aaTATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAACACCATACCCAAAAGG‑TAATGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGTTGCCGTTGCGGAGTTTTG‑AATGT‑TAA‑GACT‑GTGGTAGGGAGAATTTGGGGCAGGAA‑AAGCCCCTGGGATAGGGGGaa > 2:71712/1‑238 (MQ=255)
aaTATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAACACACTACCCAATAGG‑TAGTGAATCGGTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGAGGATGCGGTGATTTG‑AATTC‑TAG‑GACT‑GTGGGAGGGAGATTCTGTGGTAGGCA‑ACGcccttgtgaagaggggag > 2:170130/1‑223 (MQ=255)
aaTATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACTCAAAAGG‑CAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAG‑GACT‑GTGGGAGGGGGAATCTGTGGCTGGGA‑CCGCCTCTGGCATAGGGGGAg > 1:625738/1‑239 (MQ=255)
aaTATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAg > 1:628191/1‑239 (MQ=255)
aaTATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCCCTGGTTTAGGGGGAg > 1:1127635/1‑239 (MQ=255)
aaTATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGGGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAg > 1:1255119/1‑239 (MQ=255)
tatCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGc > 1:666580/1‑239 (MQ=255)
cgTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGa > 1:175288/1‑239 (MQ=255)
cgTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTAAAgg > 1:781055/1‑227 (MQ=255)
cgTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGACGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGACTCTGGTAATGGGGGAGGCGAAGa > 1:1328817/1‑239 (MQ=255)
aTTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑CAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGGGGTTTG‑AATGT‑TAA‑CACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CGCCCTCGGTGCAAGGGGGAgggggaaagagca > 2:1376848/1‑228 (MQ=255)
aGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAgatgtctcttttacacatttccg > 1:264618/1‑217 (MQ=255)
aaTACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGGAAAGGGGGGGGGGAAAAAAGAATTATTTcc > 2:716612/1‑238 (MQ=255)
aaTACGCGATTTCCTAAAAGGAAGGCTTGTATAAAGACTTAAAAACGCAACCAGTGCTACCCAGATACCAAACGACAACAGGAAAAAAAACCATCCCAAAAGGG‑TAGTAATTCGTTTG‑CTTTTAAC‑TGGG‑GATTGTCAAGGGGGTGTTGGGGTGTTTTG‑AATGT‑AAA‑ACCT‑GGGGGAGGGAAAATCTGGGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCct < 1:782302/239‑1 (MQ=255)
aTACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGTCGTTGGGGTGTTTTG‑AATGT‑TAA‑GACT‑CGGGGAGGGAGAATCTGTGGCAGGAC‑ACGCCCCTGGGGAAGGGGGAGGGGGAGAGAGAATTAtttgcc > 2:938218/1‑235 (MQ=255)
cTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAgg > 1:479160/1‑206 (MQ=255)
aCGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGTTAGCATTATTTCCTCTCCCCCTTCTTCGTCGTACCAgc > 1:182247/1‑238 (MQ=255)
gtgtATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATa > 1:974358/1‑239 (MQ=255)
gtgtATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCCCTTCTTCGCTGtcacaaaaa > 2:960970/1‑231 (MQ=255)
cacctgaaaaaCCCCACCAGTCCAACACAGATCCCTAAAGACAACAGGAAAAAAACCCATCCCAAAAGGG‑TAGTGAATCGTTTG‑TTTTGAGC‑TGGG‑GATTGTTCGGGTGGGTTTGCGGTGTTTGA‑AATTT‑AAA‑GGCT‑GTGGGAGGAAGATTCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCAc < 2:797372/232‑1 (MQ=255)
aCTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCa > 1:1179033/1‑239 (MQ=255)
ctaaaaacCGCCACCAGTGCTAACAAGATACATAACGACAACAAGAAAAAAAACCATCCCAAAAAGG‑TAGTGAATCTTTTG‑CTTTTAAC‑GGGG‑TATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GGGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCAt < 1:960970/235‑1 (MQ=255)
gAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGAACCAGATAACCCGCACCCTTaa > 1:137906/1‑239 (MQ=255)
tACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGGTAACCGGCACCATTAATTtatttg > 1:797372/1‑236 (MQ=255)
cctgttcTACAAAGATCCATAAGAAAAAAAGAAAAAAAACCCATCCCCAAAGGG‑TAGTAATTCTTTTG‑TTTTAAAC‑GGGG‑GTTTGTTGGGGGGGCGTGGGGGTGTTTTA‑AATGT‑TAA‑GACT‑GGGGGAGGGAAAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCcg < 1:524719/233‑1 (MQ=255)
caagggcacacaaaatcccaaaCGAAAACAGAAAAAAAACCCATCCCAAAAGGG‑TAGGTATTCGTTTG‑TTTTTACC‑GGGG‑GATTGTCCGGGTGGCGTTGGGTTGTTTTG‑AATGT‑TAA‑GACT‑GGGGGAGGGAAATTCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCcg < 1:716612/219‑1 (MQ=255)
acacAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGGGGGGAAGATAGCATTATTTCCCCTCCCCCTTTTTCCCTGTTACAAAAAAACGGCACCATTAATTTATAACCCCCCTTTgg > 2:45896/1‑239 (MQ=255)
acacAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTTTTCGCTGTTCCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTgg > 1:689205/1‑239 (MQ=255)
acacAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCCAATAACCGGCACCATTAATTTATAGCCGCGCttttg > 1:124773/1‑237 (MQ=255)
tggggtgatattaagagagagaaaaaaaaaCCCTAACAAAAAGT‑GTGGGAAATGTTTG‑GTTTTTAC‑GGGGTGATGGCTAGGTTGGCGTGGGGGTGTTTGC‑AAGTT‑GAA‑GAGG‑GTGGGAGGGAGATTCTGTGGCAGAAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTgg < 2:917612/216‑1 (MQ=255)
acaGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGGATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTAACAGATAACCGGCACCATTAATTTATAGCAGCGCTTTggca > 1:578414/1‑237 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGGA‑CCGCCTCTGGGATAGGGGGAGGGGCAGATAGCCTTATTTTCTCTCCCTCTTCTTCCCTGTACCAGGTAACCGGCACCCTTCATTTATAACCCCCCTTTgggtccgt > 2:941470/1‑233 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAgg > 1:376276/1‑149 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGTTAGAATTATTTCCTCTCCCTCTTCTTCGCTGGACCAGATAACCGGCCCCCTTAATTTAAAGCCGTGCTTTGGTACAGt > 1:1235343/1‑239 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCCTTAAt > 1:1202353/1‑216 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTTTAACCCCGCTTTGGTACAGt > 1:413195/1‑239 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTCCAGt > 1:795106/1‑239 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGt > 1:727155/1‑239 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGt > 1:975707/1‑239 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCCCTTCTTCGCTGTACCa > 1:365255/1‑197 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGGATAGGGGGAGGCGAAGGAAGCATTATTTCCTCTCCCCCTTCTTCGCTTTACCAGATAACCGGCCCCATTAATTTTTAACCCCGCTTTGGTAAAGt > 2:965934/1‑239 (MQ=255)
aTACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTATTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCCCTCCCTCTTCTTCGCTGTACCAGAAAAACGGCACACTTAATTTATACCCGCCCTTTGGTAAAga > 2:521331/1‑238 (MQ=255)
tcctaaacgaaaaaaaaaaaaaaacCCAAACCAAAAAGG‑TTG‑GTATGTGTTG‑CTTTTAACGGGGG‑GTTTGTTCGGGGGGGGTTGGGGTTTTATG‑AATTT‑TAA‑GGCG‑GGGGGAGGGAAAATCTGTGGCAGAAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTa < 2:974358/222‑1 (MQ=255)
acccacaccgaaaaaaaaaaaaaaCCCAAACCAAAAGGTTTGTG‑ATGGTTTGTCTTTTAAG‑GGGG‑GTTTGTTGAGGTGGGGTGGGGTTGTTTTG‑AATGT‑GAA‑GGGT‑GGGGGGGGGAAATTCGGGGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTa < 2:1179033/223‑1 (MQ=255)
aCCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGGAGATAGAATTATTTCCTCTCCCCCTTCTTCGCTCTACCCGACAACCGGACCCCTTAAATTAACACCCCCCTTTGGTaaaaaac > 2:631582/1‑233 (MQ=255)
tAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGCGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCCCCATTACTTTATAGCCCCGCTTTGGTAACGAAGCGa > 2:262747/1‑239 (MQ=255)
tAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGAGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGCAATGGGGGAGGCGAAGATAGCATTATTTCCGCTCCCTCTTCTTCGCTGTACCAGCAAACCGGCAACATTAATTTTTACCCGCGCCTTGGTAAAGTAGCGa > 2:603019/1‑239 (MQ=255)
aaCGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGGGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAGGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTTCCAGATAACCGGAACCAGTAATTTATAACCGCCCTTTGGTACAGTAGCggt > 1:37483/1‑237 (MQ=255)
cGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCGGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCCTTCTTTCCTCTCCCTCTTCTTCGCTGTACAAGAAAACCGGCACCATTAATTTAAAGCCGCGCTTTGGTACAGGAGCGaaaa > 2:675905/1‑236 (MQ=255)
cGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGGATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTTGCTGGACCAGATAAACGGCCCCCTTAATTTTTAGCCCCGCCTTTGGACAATAACGaaaa > 2:98132/1‑236 (MQ=255)
aacaGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTTGCTGTTCCAGGTAACCGGCACCATTAATTTTTAg > 1:151200/1‑210 (MQ=255)
gAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGCAGATAGCCTTATTTCCTCTCCCTCTTCTTCGCCGTACCAGATAACCGGCACCCTTAATTTATAACCCCCCTTTGGTACCGTAACGACAAACACAGGAc > 2:50969/1‑239 (MQ=255)
aaaaaaaaCCAATCCAAAAGGG‑TTGGGAATGTTTTG‑TTTTTAAT‑GGGG‑GTTTGTTCGGGGGGGGTGGCGGTTTTTTG‑AGTGT‑TAG‑GCCG‑GGGGGAGGGAAAATTTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGa < 1:521331/237‑1 (MQ=255)
aaaaaaaCCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAAt > 1:213806/1‑102 (MQ=255)
aaaaaaaCCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAAt < 2:213806/102‑1 (MQ=255)
cATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTAGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCCGTTTGGTACAGTAGCg > 1:917612/1‑216 (MQ=255)
tACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGGAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCCACATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGTCAGGCCTATCttattcct > 1:300503/1‑233 (MQ=255)
taggaattcttttG‑CTTTAAAC‑GGGG‑GTTTGTGCAGGGGGCGTGGCGTTTTTTTA‑AATGT‑AAA‑GGTG‑GGGGGAGGGAAAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTa < 1:45896/227‑1 (MQ=255)
ggTGAAGGGTTGG‑TTTTAAAC‑TGGG‑GTTTTGTCGGGTGGCTGTGCGGTTTTTTG‑AATGT‑TAA‑GACT‑GGGGGAGGGAGAATTGGTGGCAGGAC‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAAt < 1:50969/237‑1 (MQ=255)
gTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATg > 1:846471/1‑238 (MQ=255)
gTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGa > 1:323536/1‑239 (MQ=255)
gTGAATCGCTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGAc > 1:1193119/1‑209 (MQ=255)
ggTTGG‑CTTTAAAG‑GGGG‑GTTTGTTCAGGTGGCGTGGGGGT‑TTTTG‑AATGT‑GTA‑GGCTGGGGGGAGGGAAATTCGGGGGAGGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACg < 1:288805/238‑1 (MQ=255)
tttG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGACCCATTAATTTATAACCGCGCTTTGGTACAGTAGCGAAATAAACCGGACATTCTTTATCATTATCTTTTAATGAGTTatcta > 2:256796/1‑235 (MQ=255)
ttG‑CTTTTAAC‑TGGG‑TATTGTGCAGGGGGCTTGGCTGTTTTTGA‑AATTT‑TAA‑GACT‑GGGGGAGGGAGAATTGGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAg < 1:941470/239‑1 (MQ=255)
gggatttGTGCGGGTGGTGGTGTGGTTTTTTG‑AATGT‑AAA‑AGGT‑GGGGGAGGGAAATTGGGGGGCGGAAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATa < 1:539789/232‑1 (MQ=255)
gg‑gATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATAc > 1:570403/1‑237 (MQ=255)
tggggggtggttgggtttttttG‑TATTT‑TAG‑GGTT‑GGGGGGGGGAGTATTTGTGGCAGGAC‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTcac < 2:655455/221‑1 (MQ=255)
gggggggtgtggggTTTTGTG‑AATTG‑TAA‑GGGT‑GGGGGGGGGATATGCTGGGGGAGGAC‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACaa < 2:795106/227‑1 (MQ=255)
tgtggggTTTTTTG‑AATTTGTAA‑GGGT‑GGGGGGGGGAGTCTCGTTGGGAGAAA‑CCGGCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGa < 2:975707/233‑1 (MQ=255)
gTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAAACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGAAACTCTGCGTCACAACGTGAtt > 1:655455/1‑239 (MQ=255)
gTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATAAAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTtagaaaactctgttccaaacgtgatt > 2:848878/1‑217 (MQ=255)
ttggtgtttttGAAATGT‑TAA‑GTGG‑GGGGGGGGGAAAATTTGGGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGAtt < 1:256796/231‑1 (MQ=255)
tgtgggtttttG‑AAAGT‑TAAGGTTT‑GGGGGAGGGATAAGTTGGGGAGGGAC‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGAtt < 1:972652/231‑1 (MQ=255)
gtttttgG‑AATGT‑TAA‑GGCG‑GGGGGAGGGAAATTCTGGGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGATTGGTGa < 1:965934/235‑1 (MQ=255)
tggt‑gtgGGGGGGGGAATTTGGGGGAAGAACCCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGATTGGTGACAATACTTCTCTTCCa < 2:1304074/236‑1 (MQ=255)
tgGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGa > 1:226343/1‑142 (MQ=255)
tgGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGATTGGTGACAATACTTCTCTTCCAGACAtt > 1:1304074/1‑239 (MQ=255)
ggagATTCTGGGGAATGCC‑CCTCCTTTGTTATAGGGTGGGACGAAGATCTCATTATTTCCTCTCACTATTCTTCGTTTTACCAGATAACCTGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTTTCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGATTGGTGACAATACTTCTCTTCCAGACATTATCGAt < 2:1089126/239‑1 (MQ=255)
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GTTACAACTTTTATTTACCATATTAATGTCAATATCGCGTGGATTGAGCAAAATACGCGATTTGCTCATAGGAAGACGTGTATCAAGACTTGAAAACGCTACCAGTGCTACACAGATACCTAACGACAACAGGAAAAAAAACCATACCCAAAAGG‑TAGTGAATCGTTTG‑CTTTTAAC‑TGGG‑GATTGTTCAGGTGGCGTTGCGGTGTTTTG‑AATGT‑TAA‑GACT‑GTGGGAGGGAGAATCTGTGGCAGGAA‑CCGCCTCTGGTATAGGGGGAGGCGAAGATAGCATTATTTCCTCTCCCTCTTCTTCGCTGTACCAGATAACCGGCACCATTAATTTATAGCCGCGCTTTGGTACAGTAGCGATATAGACAGGACTATCTTCATCATTATCTTTTAATGACTTACGTAGTTCTGAGATACTCTGCGTCACAACGTGATTGGTGACAATACTTCTCTTCCAGACATTATCGAT > NC_000913/4361309‑4361776
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
