Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F27 I0 R1 120 139.6 2835800 98.5% 2793263 226.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,895,555 T→C 16.0% M352V (ATG→GTG)  adeP ← adenine permease, high affinity, adenine:H+ symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,895,5550TC16.0% 268.9 / 11.5 123M352V (ATG→GTG) adePadenine permease, high affinity, adenine:H+ symporter
Reads supporting (aligned to +/- strand):  ref base T (66/32);  new base C (5/17);  total (73/50)
Fisher's exact test for biased strand distribution p-value = 1.98e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 128 total aligned reads displayed.

CACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATC  >  NC_000913/3895329‑3895793
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                              
     gCTTAGACCACGCAACCGTCCGGTACCGATTTTCATCACGCAGTAGGAG‑TAAAGCCCGGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCATTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACa                                                                                                                                                                                                                               <  2:853115/238‑1 (MQ=255)
      cTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCCGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGGAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCACCCATCCCC‑CCAGCGGCGACAg                                                                                                                                                                                                                              >  1:1051294/1‑239 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTATGAGCTAAAGCCCCGCGCGCTCCCTTCGGTAATCGAGAAGCTGATCGTCATCCTCACGGCGGTTCGACACTCCTGCACAGGTTCCGTAAGAT‑CCCGCCACCTCACGCGTGCCCGAATGGTAGT‑CATGAGAACGCCCACGCAATGCACAGCACCAGCCCCCACGCAGCCCGGCC‑CAACACCCGCCAGCGGCTCCAGaaatacca                                                                                                                                                                                                                      >  2:722249/1‑233 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCCGCGCACCAGCCGCCGCGTAGCCTGGCA‑CCCTCCCCGCCAGCGGCGCAAGAAAGATaa                                                                                                                                                                                                                      >  1:317261/1‑238 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATaa                                                                                                                                                                                                                      >  1:1047693/1‑238 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATaa                                                                                                                                                                                                                      >  1:209597/1‑238 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGACAGACTGGAAGA‑CATCAGCCCGCCAACGTAAATCATCCCCCCAGCTGCAGCGTAGCCTGGCC‑ACACCCCCGCCCGAGGCGGCAGAAAGACaa                                                                                                                                                                                                                      >  2:742605/1‑238 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAAAAGATTCAGGAAGAT‑CCTGCCAGTTCACGCGTGCCCGACTGGGAGT‑CATCAGCACGCCAACGTAAATCAGCCCACCAGCTGCAGCGTAGCCCGGCA‑CCAACCCCGCCAGCGGCGACCGaaaaaaaa                                                                                                                                                                                                                      >  2:1267543/1‑233 (MQ=255)
               cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGGAATAAAAGCCGGAACAGATTTCGTAAGAT‑CCTTCCAATTCACACCGGCCCAACTGGGAGT‑CATCAGCCCGCCCACCGAAATCACCCCACCAACTGCAGCGTAGACTGGCA‑CCCCCCCCCCCCGCGCCGACCGAAAGATaa                                                                                                                                                                                                                      >  2:267987/1‑238 (MQ=255)
                   gACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAAAGCCGGGACAAATTCAGGAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGGAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCC‑CCCACCCCCCCACCGGCGCCAGAAAGATAACcagc                                                                                                                                                                                                                 >  2:1408337/1‑239 (MQ=255)
                     cGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGCAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGA‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCCGCGGGCACAGCAAGATAACcagccg                                                                                                                                                                                                               >  2:468532/1‑237 (MQ=255)
                      gTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGGACAGATTCAGTCAGAT‑CCTGCCAGTTCACGCGGGCCAGACTGGAAGG‑CATCAGCACGCCAACGCAAATCAGCGAACCAGCTGCAGCGTAACCTGGCA‑CCACCCCCGCCCACCGCGACAGCAAGAACACCCGCAgg                                                                                                                                                                                                              >  2:232865/1‑239 (MQ=255)
                         cGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAAAAGATTCAGTAAGATCCCTGCCAGGTCACGCGTGCCCGACTGGGAGT‑CCTCAGCAAGCCCACGTAAATCAGCGCACCAGCTGCAGCGGAGCCTGGCA‑CCATc                                                                                                                                                                                                                                               >  2:550486/1‑204 (MQ=255)
                            tACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAAcag                                                                                                                                                                                                         <  1:777758/238‑1 (MQ=255)
                                           cGCAGAAGGAGATAAAACCCAGCGCATTACCTTCGGAAACGGAGAAGCTAAACGGCACCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGGGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACt                                                                                                                                                                                         <  2:1313570/239‑1 (MQ=255)
                                                        aaaGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTTAGTAAGAT‑CCTGCCAGTTCACCCGTGCCAGACTGGAAAT‑CATAACCACGCCCACCTAAATCAGCGCACCACCTTCAGCGGAGCCTGGCC‑CCATCCCCGCCCGCGGGGCCAGAAAGTTAACCAGCACGAACCGCCGAACCACACCCACTCCCGTTCGACCgg                                                                                                                                                                            >  2:1385492/1‑239 (MQ=255)
                                                        aaaGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGCCAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCAGTCCGACCgg                                                                                                                                                                            >  1:694523/1‑239 (MQ=255)
                                                          aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCCGCGTAACCTGGGC‑CCCTCCCCGCCAGCCGCGACCGAAAGATAACCCACAAGAACAACAGACCCACCACCACCGCCGGCCAACCggg                                                                                                                                                                           >  2:307194/1‑237 (MQ=255)
                                                          aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACCGAAAGATAACCAGCAGGGACAGCAGACCAACAACCACTGCCGTCAGACCGGt                                                                                                                                                                           >  1:1412021/1‑238 (MQ=255)
                                                          aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGGAGCCTGGCA‑CCATCCCCGCCCGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGCCAGACCggg                                                                                                                                                                           >  2:304829/1‑237 (MQ=255)
                                                          aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACATAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAAAAACAGACCAACAACCACTGCCGCCCGACCggg                                                                                                                                                                           >  1:786816/1‑237 (MQ=255)
                                                          aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGGTCACCCGTGCCAGACTGGAAGT‑CATCAGCACGCCAAAGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCCGCGACAGAAAGATAACCAGCAGGAACAGCAGACCCACAACCCCTGCCGTCAGAACGGt                                                                                                                                                                           >  1:637516/1‑238 (MQ=255)
                                                             ccaggacgagccctcgggTAACCGAAAAGCTGAACGGCATCATCACGCCGGTAGAAACCCCGGGAACAGATCCATTAAGAT‑CCGCCCGGTCCACGCGTGCCAGATGGGAAGC‑CAGCGGCCCGCAAACGTAAATCAGCGCCCCAGCTGGAGCGTAGCCGGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGa                                                                                                                                                                       <  2:245108/223‑1 (MQ=255)
                                                                gcgcGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAAAAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAAC‑CATCAGCACGCCAACGTAAATCAGCGCCCCAGCTGCAGCGTAGCCTGGCC‑ACATCCCCGCCAGCGGCGACAGACAGATAACCAGCAGGAACAGCAGACCAACAACCACTACCGTCAGACCGGTACGAcc                                                                                                                                                                     >  1:684917/1‑238 (MQ=255)
                                                                  gcgAAACCTTGGGTAAGCGAGAAGCGGAACGGCATCATCACGGCGGTAAAAAACGCCGAAACAGATTCAGAAAGAC‑CCTGCCAGTTCCCGCGTGCCAGACTGGAAGT‑CATCAGCCCGCCAACGTAAACCAGCCCCCCAGCTGCAGCGTAGCCTGGCC‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGcc                                                                                                                                                                  <  2:734109/239‑1 (MQ=255)
                                                                      tACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGGCAGACCGGGACGACCGCCAAc                                                                                                                                                               >  1:1277206/1‑238 (MQ=255)
                                                                      tACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAAAGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGGGCCAGACTGGGAGT‑CATCAACACGCC‑ACGTAAATCAGCGCCCCCGCTGCAGCGGAGCCTGGCA‑CCCTCCCCGCCAGCGGCGACAGAAAAAAAACCAGCAGGAACAGCAGACCCACAACCACCGCCGCCAGACCGGTACGACCGCTAACCg                                                                                                                                                             >  2:144944/1‑239 (MQ=255)
                                                                        ccTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGAAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGa                                                                                                                                                            <  1:1059164/239‑1 (MQ=255)
                                                                          ttCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCGGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATa                                                                                                                                                          <  1:984985/239‑1 (MQ=255)
                                                                          ttCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGAAACAGATTCAGAAAGAT‑CCTGCCAGTCCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATa                                                                                                                                                          <  1:1026756/239‑1 (MQ=255)
                                                                          ttCGGTAATCGAGAAGCTGAACGGCACCATCACGGCGGTAATAAACCCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTCCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCACCGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGCCCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATa                                                                                                                                                          <  1:376495/239‑1 (MQ=255)
                                                                             ggaaaTGGAGAAGCGGAACGGCACCACCACGGCGGTAAAAAACGCCGGAACAGATTCAGAAAGAC‑CCGGCCAGTTCACGCGTCCCAGCCTGGAAGT‑CATCAGCCCGCCAACGAAAATCGGCGCCCCAGCTGCAGCGTAGCCTGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGc                                                                                                                                                       <  2:209597/236‑1 (MQ=255)
                                                                                        aGCCGAACGGCTCCACCAGGGTGGTAATAAACGCCGAACCAAATTCCGTAAGAC‑CCTGCCAGTCCACGCTTGCCAGAGTGGAATA‑CTTCAGCACCCCACCGAAACTCAGCGCACCAGCTGACGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGAc                                                                                                                                            <  2:389844/239‑1 (MQ=255)
                                                                                         aggtgtaaaagaaccggcgggggTAATAAACGCCGGAACAGATTCAGAAAGAC‑CCGGCCAGTCCACGCGGGCCAGCCGGGAAGT‑CACCAGCACGCCAACGTAAACCAGCGCCCCAGCTGCAGCGTGGCCTGGCC‑CAATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt                                                                                                                                           <  2:1325162/222‑1 (MQ=255)
                                                                                              ccGGCGTCATCACGGCGGTAATAAACGCCGAAACAGATTCAGTAAGAT‑CCTGCCAGTCCACGCGTGCCAGACTGAAAGT‑CATCAGCACGCCAACGAAAATCAGCGCACCAGCTGCAGCGTAGCCTGCCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAata                                                                                                                                      <  1:606577/238‑1 (MQ=255)
                                                                                               cGGCATCATCACGGCGGTAATAACCGCCGAAACAGATCCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACGGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCCCCAGCTGCAGCGTGGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAatat                                                                                                                                     <  2:123049/239‑1 (MQ=255)
                                                                                                cgcacaaacccgggggTAATAAACGCCAGAAAAGATCAAGAAAAGT‑CCGGCAAGTCCACGCGTGCCAGACT‑GAAGTCCACAAGCCCCCCACCGTAAACCAGCGCACAAGCGGCAGCGTAGCTTGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAAtata                                                                                                                                    <  2:909365/229‑1 (MQ=255)
                                                                                                         ccggcggTAATAACCGCGGGAACAGATTCAGTAAGCC‑CCTGCCATTTCACGCGGCCAAGACTGGAATT‑CATCCGCACCCAAACGTAAATCAGCGCACCAGCTGCAGCGTGGCCTGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAAc                                                                                                                           <  2:1395477/238‑1 (MQ=255)
                                                                                                            gcggTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTAAGGCCCCCAACCGAAACGCCGGAAAAGGACTCAAAATAAACCCGAACggg                                                                                                                        >  2:1197286/1‑238 (MQ=255)
                                                                                                               gaaataaACGCCGGGACAGATTCCGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGA‑CATCAGCACGGCAACGTAAATCAAAGCACCCGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCCGCGGCGACAGAAAGAAAACAAGCAGGGACAACAGACCAACAACCACAACCGGCAGAACGGTTCGACGCCCAACAGATACGCCGGGAGAAGACTCAAAACAAGCAGAAACGgaaga                                                                                                                     >  2:1039835/3‑239 (MQ=255)
                                                                                                               gTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGGACGACCGCCAACCGATACGCCGGCAGAGGACTCAATATAAGCCGTAACGgaaga                                                                                                                     >  1:927235/1‑239 (MQ=255)
                                                                                                                  ataaACGCCGGGACAGATTCAGTAAAAA‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCCCCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCCGCGGCGGCAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGCCAGACGGGTACCACCGCCCACCGCGACCCCGCGAGAGGGCGCCATATAAAACGTAACAgaagaaat                                                                                                                  >  2:885414/1‑237 (MQ=255)
                                                                                                                     aaCGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACGGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCACCTGCAGCGTACCCGGGCC‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTAcc                                                                                                               <  1:401100/239‑1 (MQ=255)
                                                                                                                          cGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACa                                                                                                                                                                                                                               >  1:612535/1‑122 (MQ=255)
                                                                                                                          cGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACa                                                                                                                                                                                                                               <  2:612535/122‑1 (MQ=255)
                                                                                                                          cGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATaa                                                                                                          >  2:570728/1‑239 (MQ=255)
                                                                                                                          cGGAACAGACTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATaa                                                                                                          >  1:352036/1‑239 (MQ=255)
                                                                                                                               aagtttCAGTAAGAC‑CAGGCAAGTCACCGCGTGCCAGTCTGGAAGT‑CATCCGCCCGCAAACGAAAACCGGCGCACCAGCTGCGGCGTACCCGGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGaa                                                                                                     <  2:450610/235‑1 (MQ=255)
                                                                                                                                  aTTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCg                                                                                                  >  2:1299996/1‑239 (MQ=255)
                                                                                                                                  aTTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCg                                                                                                  >  2:980929/1‑239 (MQ=255)
                                                                                                                                   ttCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCGGACTGGAAGT‑CATCAGCACGCCAACGTAAACCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGaa                                                                                                     <  1:977655/235‑1 (MQ=255)
                                                                                                                                   ttCAGAAAGAC‑CCTCCCGTTTCACGCGTGCCAGACTGGAAGT‑CACCCCCACGCCACCGAAAATCAGCGCACCAGCGGCAGCGTAGCCTGGCC‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGaa                                                                                                     <  2:900679/235‑1 (MQ=255)
                                                                                                                                       gTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc                                                                                             >  1:82358/1‑239 (MQ=255)
                                                                                                                                       gTAAGAT‑CCTGCCAGTTCACGCGCGCCAGACTGGAAGA‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACGAACAACCACTGCCGGCAGACCGGAACGACAGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGCAGTACCGATAACAGAACCGTTccc                                                                                             >  2:930360/1‑237 (MQ=255)
                                                                                                                                         aaGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCAAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCa                                                                                              <  1:1007123/236‑1 (MQ=255)
                                                                                                                                         aaGAT‑CCCACCAGTCCACGGGTGCCAGACCGGAAGT‑CCTAAGCACGCAAACGTAAATCGGCGCACCAGCAGCAGCGTAGCCGGGCC‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACGCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc                                                                                             <  2:276290/237‑1 (MQ=255)
                                                                                                                                         aaGAC‑CCTGCCAGTCCACGCGTGCCAGACCGGAAGT‑CATCAGCACGCAAAAGTAAATAAGCGCACCAGCTGCAGCGAAGCCGGGCC‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc                                                                                             <  1:628394/237‑1 (MQ=255)
                                                                                                                                          aGAT‑CCTGCCAGTCCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCCCCAGCTGCAGCGTAGCCTGGCC‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa                                                                                          <  1:1293821/239‑1 (MQ=255)
                                                                                                                                                 tGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATTTAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTAACGGAAGAGAt                                                                                    >  2:767044/1‑239 (MQ=255)
                                                                                                                                                 tGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                    >  2:975952/1‑239 (MQ=255)
                                                                                                                                                 tGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                    >  2:1299902/1‑239 (MQ=255)
                                                                                                                                                 tGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                    >  1:208699/1‑239 (MQ=255)
                                                                                                                                                 tGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                    >  1:1036421/1‑239 (MQ=255)
                                                                                                                                                   ccAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                    >  2:123448/1‑237 (MQ=255)
                                                                                                                                                   ccAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                    >  1:121024/1‑237 (MQ=255)
                                                                                                                                                       ttCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGCCCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGACGAGGACACAATATAAGCCGTCACGGaagaagaa                                                                                                                 >  1:1282433/1‑202 (MQ=255)
                                                                                                                                                       ttCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTc                                                                              >  1:923125/1‑239 (MQ=255)
                                                                                                                                                       ttCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTc                                                                              >  2:478439/1‑239 (MQ=255)
                                                                                                                                                       ttCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTc                                                                              >  1:910945/1‑239 (MQ=255)
                                                                                                                                                       tccccgcgTCCCATACAGAAATT‑CAGAAGCACGCCAACGAAAACCAGCGCCCCAGCTGCAGCGTGGCGTGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATAc                                                                                  <  2:57708/231‑1 (MQ=255)
                                                                                                                                                        tCACGCGTGCCAGACGGGAAGT‑CATCAGCACGCCACCGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTg                                                                                <  1:1277331/236‑1 (MQ=255)
                                                                                                                                                         cACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCg                                                                             >  1:457685/1‑238 (MQ=255)
                                                                                                                                                              gggCCAGACTGGAAGT‑CATCAGCACGCAACCGTAAATCAGCGCACCAGTGGCACCGTACCCGGGCA‑CCACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATGCTGTCGACATAc                                                                       <  1:232865/237‑1 (MQ=255)
                                                                                                                                                               tGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACa                                                                      >  2:1017929/1‑239 (MQ=255)
                                                                                                                                                                 ccAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATa                                                                        >  1:1032566/1‑235 (MQ=255)
                                                                                                                                                                 ccAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAgc                                                                    >  1:1361340/1‑239 (MQ=255)
                                                                                                                                                                 ccAGACTGGAAGT‑CACCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATa                                                                        <  2:1032566/235‑1 (MQ=255)
                                                                                                                                                                     aCTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCCCTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGCAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGGGATACTGTCGACATACAgcg                                                                   >  1:1106745/1‑236 (MQ=255)
                                                                                                                                                                                atcaGCACCCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCGGGCC‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATgcg                                                      <  1:219520/239‑1 (MQ=255)
                                                                                                                                                                                acccccccGCCAGCGTAAATCAGCGCACCAGCTGCAGCGGAGCCGGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATgcg                                                      <  2:838587/232‑1 (MQ=255)
                                                                                                                                                                                accaGCACCCAAACGTAAATCGCCACACAAGCGGCAGCGTAGCGTGGCA‑CCCTCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATgcg                                                      <  1:1385492/237‑1 (MQ=255)
                                                                                                                                                                                          cagcGTAAACCGCCGCCCCAGCTCAAGCGTGCCCGGGCC‑CCCCCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTc                                            <  2:908594/236‑1 (MQ=255)
                                                                                                                                                                                                     aGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCAt                                  >  2:1024437/1‑238 (MQ=255)
                                                                                                                                                                                                       cgcACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGa                                                                                                                                             <  2:258867/129‑1 (MQ=255)
                                                                                                                                                                                                       cgcACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGa                                                                                                                                             >  1:258867/1‑129 (MQ=255)
                                                                                                                                                                                                       cgcACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATcc                                >  1:92154/1‑238 (MQ=255)
                                                                                                                                                                                                       cgcACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATcc                                >  2:1188849/1‑238 (MQ=255)
                                                                                                                                                                                                       cgcACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATcc                                >  1:1159288/1‑238 (MQ=255)
                                                                                                                                                                                                        gcACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCg                               >  2:478531/1‑238 (MQ=255)
                                                                                                                                                                                                            cAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGa                          <  1:44595/239‑1 (MQ=255)
                                                                                                                                                                                                                tGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGAc                         <  1:980929/236‑1 (MQ=255)
                                                                                                                                                                                                                     ttcgattcggCA‑CCCTCCCCTGCAGCGGCGACAGAAAGCTAACCAACAGGAACACCTGACCATCATCCGCGGCTGTCATCCCGGTACAACCGCCAACCGGTACGCCAGAAGAGGACTCAATATAAGCCGGAACGTAAGAAGATCAGATAAACGAACCGGTCACGCAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCGTCTCATCCGCCAGACCTGCTTTa                 <  2:164202/231‑1 (MQ=255)
                                                                                                                                                                                                                         cccggcca‑ccacCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCgg             <  2:121024/233‑1 (MQ=255)
                                                                                                                                                                                                                           cggcca‑ccacCCCCGCCAGCGGCGACAAAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCgg             <  2:1248004/233‑1 (MQ=255)
                                                                                                                                                                                                                           cTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCgg             <  1:123448/237‑1 (MQ=255)
                                                                                                                                                                                                                            tGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTc           >  1:1333973/1‑238 (MQ=255)
                                                                                                                                                                                                                            ctggacccACCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCgg             <  1:602181/231‑1 (MQ=255)
                                                                                                                                                                                                                                     tCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAAt   >  1:565684/1‑238 (MQ=255)
                                                                                                                                                                                                                                     tCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAAt   >  1:173443/1‑238 (MQ=255)
                                                                                                                                                                                                                                     tCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATc  >  1:549487/1‑239 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                              
CACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCATCATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGAT‑CCTGCCAGTTCACGCGTGCCAGACTGGAAGT‑CATCAGCACGCCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCTGGCA‑CCATCCCCGCCAGCGGCGACAGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGCGGGAATTTCCCCTTCTCATCCGCCAGACCTGCTTTATCGGTCACGCCAATC  >  NC_000913/3895329‑3895793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A