Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,895,555 T→C 12.7% M352V (ATG→GTG)  adeP ← adenine permease, high affinity, adenine:H+ symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,895,5550TC12.7% 219.9 / 3.2 96M352V (ATG→GTG) adePadenine permease, high affinity, adenine:H+ symporter
Reads supporting (aligned to +/- strand):  ref base T (49/28);  new base C (2/13);  total (54/42)
Fisher's exact test for biased strand distribution p-value = 4.20e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 107 total aligned reads displayed.

GCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATCGGTCACGCCAATC  >  NC_000913/3895328‑3895793
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                  
gCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGGAATAAA‑AGC‑CGCAAAAAAGACCGTAAGATCCTGCCCATTCACTCGGGC‑CAGACGCGG‑AGTCCTCAGCACG‑CCCCCCTAACTCGCCGGACCCGCGCCATCGTAGCCT‑GG‑CCCCAcccccccccccg                                                                                                                                                                                                                                         >  2:21691/1‑235 (MQ=255)
  aCGGGGTTAGATCCCGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CAAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAgcgg                                                                                                                                                                                                                                        <  1:471765/238‑1 (MQ=255)
     ggCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGCCTGGA‑AGTCCTCAGCACG‑CCAACGTAAATCAGCGCACCACCTCCACCGTAACCT‑GG‑CCCCATCCCCCCCAccgggcac                                                                                                                                                                                                                                    >  1:302137/1‑235 (MQ=255)
             tcccGCAGACGTCGGGTACCGATTTTAATCACGCAGTAGGAGAAAAAGCCCAGCGCGATCCCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGGGGTAATAAC‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGGGTGC‑CAGACTGGA‑AGTCATCAGCCCG‑CAAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGAt                                                                                                                                                                                                                          <  1:651808/236‑1 (MQ=255)
                cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCCGCACC‑CCAACCGAAATCAGCGCACCACCCCGAGCGTGGGCC‑CG‑CACCACccccccagtcccctaaaaaaaacctag                                                                                                                                                                                                                         >  2:1269270/1‑216 (MQ=255)
                cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAACTGCAGGGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GCC‑CGAACAATAAc                                                                                                                                                                                                                       >  1:118375/1‑239 (MQ=255)
                cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CCGAACAGATTCAGTAAGAACCTGCCAGTTCACGCGTGC‑CAGACTGGG‑AGTCATCAGCACG‑CCACCGTAAATCAGCGCACCAACTCCAGCGCAGCCA‑GG‑CACCACCCCCCCCCACGGC‑GGC‑AAAAAGATaa                                                                                                                                                                                                                        >  2:629928/1‑238 (MQ=255)
                cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGGAATAAA‑CGC‑CGGAAAAGATTCAGTAAGAACCTGCCAGTTCACGCGTGC‑CAGACTGGC‑AACAATCAGAACG‑CCAACGGAAAACAGCGCACCACCGGCCACGTAGCCC‑GG‑CCCCCTCcccccccccgggccgagaaaaaaaac                                                                                                                                                                                                                         >  2:757420/1‑219 (MQ=255)
                cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCCTCGGTAAT‑CGAG‑AAACTGAACGGCATCATCACGGCGGGAAAAAA‑CAC‑CGGAACAAAGTCCAGAAAATCCTGGCCGCTCAAGCAGTC‑CAGACGGGAGAGCCA‑AAGAAAG‑CCAACGGAAAAAAACACACCACACGAGGCATAACCG‑GG‑CACCAACCCCCCCAAGGGC‑GAC‑AGAAAAATaaa                                                                                                                                                                                                                       >  2:284944/1‑238 (MQ=255)
                 gCAGACGTCCGGTACCGATTTTCAACCCGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAAcc                                                                                                                                                                                                                      <  1:919456/239‑1 (MQ=255)
                   agccGTCCGGTCCCGATTTTCATCACGCAGTAGGAGAAAAAGCCCAGGGCGATACCTTCGGTAAT‑CGAA‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACca                                                                                                                                                                                                                     <  1:776182/235‑1 (MQ=255)
                      cGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAAATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CCGACTGGC‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAACTGCAGCGTACCCT‑GG‑CCCCATCCCCGCCCCAGGC‑GAC‑CAAAAGATAAcccaccg                                                                                                                                                                                                                 >  1:1152097/1‑234 (MQ=255)
                       gTCCGGTACCGATTTTCATCCCGAAGTAGGAAATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGACCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CAAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAgg                                                                                                                                                                                                                <  1:704518/239‑1 (MQ=255)
                              accttttttaaacaccggtgaGGAAAAAAGGCCCGGGGGGATACCCTGTGTAAT‑CGGA‑AAGGTGAAGGGCATCATCACGGGGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGGGC‑AAGGCGGGA‑AGTAATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAAcagc                                                                                                                                                                                                          <  2:467670/218‑1 (MQ=255)
                                  aTTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGCGC‑CAGACTGGA‑AGTCATCCGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAACCT‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCCGCCGGAACACCCGAcc                                                                                                                                                                                                     >  1:536127/1‑239 (MQ=255)
                                       tctcccggcatAGGAAAAAAACCCCAGCGCGATACCTCTGGTAAT‑‑GAGAAAGCTGAACGGAACCATCAGGGCGGTAAAAAA‑CCC‑CGGAAAAGTTTCAGTAAGACCCTGCCAGTTCACGCGTGC‑CAGTCTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACcaacaa                                                                                                                                                                                                <  2:650039/229‑1 (MQ=255)
                                            cGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑AGA‑CCGGACAAATTCACTAAGAACCTGCCCAGTCACGCCGGC‑CAGACCGGA‑AGGACCCACCACGCCCAACAAAAAAAAACCCCCCA‑CTCCCGCGGAGCCC‑GG‑CACCCACACCGCCAGCGCCAGAC‑GGAAA‑AGAACCACCAGGaaaaaccaaacaacaaaaaca                                                                                                                                                                                           >  2:1266518/1‑220 (MQ=255)
                                                  aGGAAAAAAAGCCCGGCGCGATACCTTGGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAC‑CGC‑CGGAACAGTTTCAGTAAGTTCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGt                                                                                                                                                                                      <  1:877599/238‑1 (MQ=255)
                                                         aaaGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCCGTTCACACGTGC‑CAGACTGGG‑AATCATCAGCACC‑CCAACGTAAATCACAGCACCCACTGCCGCCGAACCT‑TG‑CACCCACCCCCCCAGCGAC‑GCC‑CGAAAGATAAACACCAGGAAAACCAGAccccaaaaaaccgccgccagacacg                                                                                                                                                                              >  2:1204131/1‑216 (MQ=255)
                                                         aaaGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAACACG‑CCCACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GCC‑AGAACAATAAACCGCAGGAACAGCAGACCAACAACCACTGCCGCCCGAcccg                                                                                                                                                                              >  1:306937/1‑237 (MQ=255)
                                                           accccagggggaacccTTCGGTAAG‑CGAG‑AAGCTGAACGGCATCATCAGGGCGGAAATAAA‑CGC‑CGAAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CAAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTa                                                                                                                                                                            <  1:940960/225‑1 (MQ=255)
                                                           aGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGGACAGATTCAGTAAGAGCCTGCCAGTTCACGCGTGC‑CCAACTGGA‑AGGCATCCACACG‑CCCACGTCAAACAGCGCACCCCAGCCAGCGGAGCCT‑GG‑CCCCATCCCCCCCCGCGGC‑GAC‑CGAAAGAAAAACCAAAGGAACAACACACAcacaacaaacacccccaaaaccgg                                                                                                                                                                             >  2:438519/1‑220 (MQ=255)
                                                           aGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CCGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCACATGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCAATGCCGTCAGACCggga                                                                                                                                                                            >  1:174235/1‑237 (MQ=255)
                                                                aGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGgacgac                                                                                                                                                                        >  1:128378/1‑238 (MQ=255)
                                                                     ggatactttggtgaaagggg‑aAGCGGAAGGGCACCA‑CCCGGGGGTAAAAAACCGC‑GGAAAAAGATTCAGAAAACTCCTGCAAGTCCACGCGTCC‑CAGACGGGA‑AGTCCCCAGCCCG‑CAAACGAAAACCAGCCCCCAAGCGGCAGCGTAGCCG‑GG‑CCCCACCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGcc                                                                                                                                                                    <  2:306937/219‑1 (MQ=255)
                                                                         ccTCCGGTAATGCGA‑‑AAGCGAAACGGCA‑CAACCCGGGGGTAAAAAA‑CCCGCGAAACAGATCCATAAGGGTCCGGACAGTCCACGGGTCC‑CAGGCGGGA‑GGCCACCCGCACG‑CCACGGTAAATCAGCGCCCAAGCGGAGGCGTAGCCG‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGa                                                                                                                                                              <  2:922860/239‑1 (MQ=255)
                                                                                       aagatacTGAAGGGCATCCCGAGGGGGTTAAAAAA‑CGC‑CAAAAAGTATTCAGAAAGCTCCTGCAAGTGCGCGGTTGC‑AAGCTTGAA‑TGTCATGAGCCCG‑CAAACGTAACTCAGAGCACCAGCTG‑AGGGGTGCCTGGG‑CACCTCCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAaga                                                                                                                                                  <  2:1079043/233‑1 (MQ=255)
                                                                                           agttaaaCGGCATCCGCACGGCGGTAAAAAA‑CCC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCG‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGAc                                                                                                                                              <  1:1295330/234‑1 (MQ=255)
                                                                                           aGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAAcagca                                                                                                                                                                                                         <  1:472706/180‑1 (MQ=255)
                                                                                             cTGAACGGCATCAGCACGGGGGAAAGAAC‑CGC‑CGGAACAGATTCAGTAAGACCCTGCCAGTGCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCTT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGAc                                                                                                                                              <  1:210296/237‑1 (MQ=255)
                                                                                              tGAACGGCATCATCACGGGGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGACCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt                                                                                                                                             <  1:1256762/237‑1 (MQ=255)
                                                                                                            gcgggggAAAAAAA‑CGC‑CGGAACAGATCAAGTAAGACCCGGCCAGTTCCCGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CAAACGTAAACCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAAc                                                                                                                             <  1:629928/238‑1 (MQ=255)
                                                                                                               gcggTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGGAGCCC‑GG‑CACCATCCCCGCCAGCGGC‑GCC‑AGCAAGATAACCACCACGAACAGCCGACCAACAACCACCGCCGTCAGAACCGGACGACCGCCAACCGCGAACCCCGAAGAGGaagcaaaaaaaaacggaaaggg                                                                                                                          >  2:306498/1‑218 (MQ=255)
                                                                                                                     aaaaaccGC‑CGAAACATCTTCAGAAAGACCCTGCCAGTCCAC‑CGTGCACCGGTCGAA‑AGTCACCAGCCCG‑CCAAGGTAAACCGGCGCACCAACGGCAGCGGGCCCT‑GG‑CCCCACCCCCGCCGGCGGC‑GAC‑AGAAAGATAACCCGCAGAAACAGCAGACCAACAACCACCGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGAAAGAGGACTCAATATAAGCCGTAACGGaagaag                                                                                                                     <  2:452250/233‑1 (MQ=255)
                                                                                                                               cGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATACCCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATAGAAGCCGTAACGGAAGAAGTACCGaaaa                                                                                                            >  1:1229771/1‑239 (MQ=255)
                                                                                                                               cGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCACCCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGAACCGATaa                                                                                                            >  1:784695/1‑239 (MQ=255)
                                                                                                                               cGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACCCCGGAAAAGGACTCAAAATAAGCCGAAACGGAAAAAAAACCGaaaa                                                                                                            >  2:435680/1‑239 (MQ=255)
                                                                                                                                ggAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGa                                                                                                                                                                                                                           >  2:207958/1‑127 (MQ=255)
                                                                                                                                ggAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGa                                                                                                                                                                                                                           <  1:207958/127‑1 (MQ=255)
                                                                                                                                       aTTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCg                                                                                                    >  1:446927/1‑239 (MQ=255)
                                                                                                                                          cataaaaatccgaccAGTTCCCGGGTCC‑CAGCCTGGA‑AGTCACAAGCCCC‑CAAACGAAAACCGGCCCACCGGCTGCAGGTTAGCCG‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTc                                                                                                 <  2:128378/226‑1 (MQ=255)
                                                                                                                                          cAGTAAGACCCTGCCAGTTCACGCGTGC‑AAGATTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTc                                                                                                 <  1:1295710/239‑1 (MQ=255)
                                                                                                                                             tAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCACTATAAGCCGTAACGGAAGAAGACCCGATCAACGAACCGGTccgg                                                                                              >  1:1101546/1‑236 (MQ=255)
                                                                                                                                              aaGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCaa                                                                                                                                          >  1:405487/1‑194 (MQ=255)
                                                                                                                                               agtcccTGCCGGTTCACGCGGGC‑ACGGCTGGA‑AGCCACCAGCCCG‑CCACCGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa                                                                                            <  1:60880/235‑1 (MQ=255)
                                                                                                                                                 aTCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTACGCGGAGAAGAACCGAAAAACGAACAGGTCCCGGaaa                                                                                          >  2:793479/1‑238 (MQ=255)
                                                                                                                                                 aTCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGACT‑GG‑CACCATCACCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATTTAAGCCGTAACGGAAGAAGGACCGCTAAACGAACAGGCAACGGacg                                                                                          >  1:201448/1‑237 (MQ=255)
                                                                                                                                                     tGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGAACCGATAAACGAACCGGTCCAGGAAGAGAt                                                                                      >  1:747051/1‑239 (MQ=255)
                                                                                                                                                     tGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAAAAGTACCGATAAACGAACCGGTCACGGAAGAGAt                                                                                      >  1:416228/1‑239 (MQ=255)
                                                                                                                                                      gCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATa                                                                                     >  1:320551/1‑239 (MQ=255)
                                                                                                                                                      ccctgttcagccggcc‑cAGTCTGGA‑ATACATCACCCCG‑CAAACGAAAACCAGCGCACCAGCGGCAGCGTAGCAG‑GG‑CCCCACCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATa                                                                                     <  2:118375/224‑1 (MQ=255)
                                                                                                                                                       ccAGTTCACGGGGGC‑CAGACGGAA‑AGCCATCAGCACG‑CAAACGTAAATCAGCGCACCAGCTGCAGCGAAGCCG‑GG‑CACCACCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATAc                                                                                    <  1:474433/239‑1 (MQ=255)
                                                                                                                                                       ccAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGGTAAACGAACCGGTCACGGCAgagaa                                                                                      >  1:1131735/1‑236 (MQ=255)
                                                                                                                                                        cAGTCCGCGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CAAACGTAAAACAGCGCACCAGGGGCAGCGTACCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATAc                                                                                    <  1:407048/238‑1 (MQ=255)
                                                                                                                                                         catttcggcgTCC‑CAGATTGGA‑ATTCCAAAGCCCG‑CCAACTAAAATCAGCGCCACAGGGGC‑GGGTGGTCA‑GGACACTTCCCCCGCCCGCGGC‑GCC‑AGAAAAATAACCAGCAGGAAAAGCAGACCAAGAAACCCTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTg                                                                                  <  2:1260577/232‑1 (MQ=255)
                                                                                                                                                           ttCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGACCAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCCATACGCCGGAAGAGGGCTCAATATAAGCCGTAACGGCAGAACTACCGAAAAAAGAACCGGGCACAGAAGAGAAACGGTc                                                                                >  2:1304815/1‑239 (MQ=255)
                                                                                                                                                           ttCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGGAGAGATACTGt                                                                                 >  1:1050862/1‑238 (MQ=255)
                                                                                                                                                                     tgccaggtagagattcatcggaccG‑CAAAGGTAAACAAGCGCGCCAGCGGCAGCGTACCCT‑GG‑ACCCACCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATAc                                                                         <  1:1012009/215‑1 (MQ=255)
                                                                                                                                                                     c‑cAGCCGGGA‑CGTCATCAGCCCG‑CCAAGGAAAAACAGGCCCCAAGTGGCAGCGTAGCCT‑GG‑CACCACCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACGGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAg                                                                       <  1:1371486/238‑1 (MQ=255)
                                                                                                                                                                     c‑cAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCACCAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGCCTCAATATAAGCCGTAACGGAAGAAGTACCGCTAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAg                                                                       >  1:18330/1‑238 (MQ=255)
                                                                                                                                                                     c‑cAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGCAGAAGTACCGCTAAACGACACGGTCACGAAAGAGAAACTGTCGaaaaaaac                                                                       >  2:1195668/1‑231 (MQ=255)
                                                                                                                                                                          aCTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGAAACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGGACCGCTAAACGACCACGGCACGGAAGAGATACAATCGaaaaaaaacaccg                                                                  >  2:771026/1‑227 (MQ=255)
                                                                                                                                                                              gA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGCTACGCCGGACGAGGCCCCAATATAAGCCGCAACGGAAGAAGAACCGATAAACAAACCGGTCACGGAAGAGAAACTGTCGAAAAACAGCGCCCGcac                                                              >  2:669114/1‑237 (MQ=255)
                                                                                                                                                                                     atcaGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACCACCGCCAACCGATACGCCGGAACAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAAAGAACCGGTCACGGAAGAGATACTATCGACaaaaacggccccgtgcaagag                                                        >  2:1174678/1‑219 (MQ=255)
                                                                                                                                                                                     atcaGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGAACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGAACCGATAAACGAACCGGCCACGGAAGAGAAACTGTAGACATACAACCCCTGCttaaaggc                                                        >  2:920219/1‑233 (MQ=255)
                                                                                                                                                                                        tggtaaaaggaacaaaaCCAGCCCACCAGCAGCAGCGGACCCG‑GC‑CACCACCCCCGCCAGCGGC‑CAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGcgcg                                                     <  2:898449/225‑1 (MQ=255)
                                                                                                                                                                                        caacacgcaaaggaaagacAGCGCCCCAGCTGCAGCGTAGCCG‑GG‑CCCAATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGcgcg                                                     <  1:968256/221‑1 (MQ=255)
                                                                                                                                                                                             g‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt                                                                                                                                             <  1:602123/146‑1 (MQ=255)
                                                                                                                                                                                              gcaaaCGTAAATCAGCCACCCAGCTGCAGCGTAGCCG‑GG‑CCCCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAAtt                                               <  1:435680/236‑1 (MQ=255)
                                                                                                                                                                                                         cccgccccccAGCCCCAGCGTAGCCT‑GG‑CACCACCCCCCGCGGCGGC‑GACGAAAAAGA‑AACCAGACGGAACAGGCGCCCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCa                                    <  2:174235/231‑1 (MQ=255)
                                                                                                                                                                                                             cgcACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGAACCGATAAACGAACAGGTCACGGAAAAGATACTGTCGACATACAGCGCCTGCTT‑CATGCCGGGGAATTTCCCCTTCTAAT‑cc                                >  2:371396/1‑238 (MQ=255)
                                                                                                                                                                                                              gcACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAAAAGTACCGAGAAACGAACCGGGCACGGAAGAGATACTGTCGACATACAGCCCCAGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑cccc                              >  2:634696/1‑237 (MQ=255)
                                                                                                                                                                                                               cACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAGAGATAACCAGCAGGAACAGCAAACCAACAACAACTGCCGTCAGACCGGTACACACGCCAACCGATACGCCGGAAGAGGACGCAAAATAAACCTCAACGGAACAAGGCACGAACAACGAACCGGCCACGGAAAAGACAACGTCGACACAAAACTCCTCATT‑CAGGCGGGGGAAATTCCCCtcttcaaccccc                              >  2:409083/1‑228 (MQ=255)
                                                                                                                                                                                                                  cAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTccc                                           >  1:898449/1‑223 (MQ=255)
                                                                                                                                                                                                                    gCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAgcgc                                                                    >  1:31281/1‑197 (MQ=255)
                                                                                                                                                                                                                    gCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCCCGGGAATTTCCCCTTCCCAT‑CCGCCAGAc                         >  1:901594/1‑238 (MQ=255)
                                                                                                                                                                                                                     accgagcctcgagccggcccccACCCCCGCCCGGGGC‑GAA‑AGAAAGATAACCAGCAGGAAAAGCAGGCCAACAGCCCCCGCCGTCAGACCGTGCCGACCGGCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGAc                         <  2:302137/219‑1 (MQ=255)
                                                                                                                                                                                                                      tGCCGCGAAGCCG‑GG‑CCCCACCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGAc                         <  1:757420/236‑1 (MQ=255)
                                                                                                                                                                                                                            gTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTa                 >  1:1116627/1‑238 (MQ=255)
                                                                                                                                                                                                                             tAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATc               >  1:169056/1‑239 (MQ=255)
                                                                                                                                                                                                                              aGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCAGTAACGGAAGAAGAACCGCTTAACGAACCGGTCACGGAAAAGATACTCTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCacgccgcctttaacg              >  2:20045/1‑225 (MQ=255)
                                                                                                                                                                                                                               gCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCg                                                                                                                                                                      <  2:960061/88‑1 (MQ=255)
                                                                                                                                                                                                                               gCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCg                                                                                                                                                                      >  1:960061/1‑88 (MQ=255)
                                                                                                                                                                                                                                  t‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTCCTTTATCGGTc           >  1:469683/1‑238 (MQ=255)
                                                                                                                                                                                                                                   cagacACCCTCCCCGCCAGGGGC‑CAC‑AGAAAGATAACCAGAAGGAACAGCAGACCAACAACCACGGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATCgg             <  1:696675/233‑1 (MQ=255)
                                                                                                                                                                                                                                       cACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGCAGCAGTACCGATAAACGAACCGGTCCCGGAAGAGATACTGTCGCCAAACACCGCCTGCTC‑AATGCGCGGGAATTTCCCCTTCGCATCCCCCCACACC‑GCTTTATTGGtaccgc       >  2:1044364/1‑234 (MQ=255)
                                                                                                                                                                                                                                       cACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCCCGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCCCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTACCGGTCACGc       >  2:1223913/1‑239 (MQ=255)
                                                                                                                                                                                                                                       cACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CCTGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATCGGTCACg        >  1:448272/1‑238 (MQ=255)
                                                                                                                                                                                                                                       cACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATAATGTCGACATAAAGCGCCACCTT‑CATGCGCGGGAATTTCCCCTTCCCAT‑CCGCAAACCCCGCTTTAACGGTCAcc        >  2:472119/1‑237 (MQ=255)
                                                                                                                                                                                                                                           aTCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CAGCCAGACCTGCTTTATCGGTCACGCCAAt   >  1:218342/1‑239 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGACAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTCCGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAGGGCGGAACGGAAGAAGTACCGATACACGAACAGGTCACGGAAGAGATACTGTCCACATACACGGCCTGATTACAGACCCGGCAA‑TTCCCCCTCTCAA‑CCGCCAAAACCGCtttcaccggacagacaaac  >  2:533046/1‑223 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATACCCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGACGCGGACTCAATATAAGCCGTAACGGAAAAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACCGCCCCCGCGC‑CCGACGCGGGAATTTCCCCTTCACAA‑CCCCCAAACCTCCTTTATGTGTCACGCaaaac  >  2:1276695/1‑237 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt                                                                                                                                             >  1:883456/1‑102 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt                                                                                                                                             <  2:883456/102‑1 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCt                                         <  1:672315/201‑1 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCt                                         >  2:672315/1‑201 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATCGGTAACGCCAATc  >  1:724235/1‑239 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATCGGCAACGCCAATc  >  1:206369/1‑239 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACACCGCCTGCTT‑CATCCGCCGGAATTTCCCCTTCCCAT‑CCGCCAGCCCCGCTTTATCGGTCCCGCCAATc  >  2:862871/1‑239 (MQ=255)
                                                                                                                                                                                                                                            tCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGAAACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCCCAT‑CCCCCAAACCTCCTTTATCGGTCCCCCCaaac  >  2:1180805/1‑237 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                  
GCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAAT‑CGAG‑AAGCTGAACGGCATCATCACGGCGGTAATAAA‑CGC‑CGGAACAGATTCAGTAAGATCCTGCCAGTTCACGCGTGC‑CAGACTGGA‑AGTCATCAGCACG‑CCAACGTAAATCAGCGCACCAGCTGCAGCGTAGCCT‑GG‑CACCATCCCCGCCAGCGGC‑GAC‑AGAAAGATAACCAGCAGGAACAGCAGACCAACAACCACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTT‑CATGCGCGGGAATTTCCCCTTCTCAT‑CCGCCAGACCTGCTTTATCGGTCACGCCAATC  >  NC_000913/3895328‑3895793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A