Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F17 I0 R1
|
155 |
84.1 |
1797446 |
90.9% |
1633878 |
230.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,680,184 |
T→G |
18.7% |
V256G (GTG→GGG) |
kdgK → |
2‑dehydro‑3‑deoxygluconokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,680,184 | 0 | T | G | 18.7%
| 115.4
/ 2.5
| 77 | V256G (GTG→GGG) | kdgK | 2‑dehydro‑3‑deoxygluconokinase |
| Reads supporting (aligned to +/- strand): ref base T (22/35); new base G (14/4); total (38/39) |
| Fisher's exact test for biased strand distribution p-value = 6.00e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GAAGAGACACAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATA > NC_000913/3679949‑3680408
|
ttttaaggagcaggggTTTACCAACAAATGCTGGAATTCCGGGATATCCCCTTCCGGGCGCCGGACGGCGAAGACTCGGTGTGG‑GGTAAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGAt < 1:427771/225‑1 (MQ=255)
acacAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGGGTCCATTGCTGGCGAAGGGTTAGTGGAGGTTCCGGCGGGGAAAATGCCGAAAGAAAAAGGGAACGGTa > 2:342957/1‑238 (MQ=255)
gcagGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGAGGGTCCGCGGGGGGAACAGCCGAAAAAAAAAAAGATAGAAACAACCg > 1:270729/1‑239 (MQ=255)
gtACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGGTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATGGATcccccccaagcgc > 2:315447/1‑232 (MQ=255)
tACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCCATACCACCGCAGccg > 2:693907/1‑236 (MQ=255)
ccAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTTCCGAAAGAAAAAGGGATCGATACACCCGCAGCTGGc > 2:457368/1‑238 (MQ=255)
ccAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGGTACCCCCCCAGCTggg > 2:147681/1‑237 (MQ=255)
ccAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGCTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGGAAAAGGGATCGATAACACCGCAGCTGGc > 2:662398/1‑238 (MQ=255)
gcggaTGGTGGAAGGCCCGGATATCGCCCTCCTGACGGCGGACGACGAAGGCGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGAc < 2:804053/234‑1 (MQ=255)
acaaATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGAct < 2:209996/239‑1 (MQ=255)
caaATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACTCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGCAAGAAAAAGGGATCGATACCACCGcggtctcttataa > 2:427771/1‑227 (MQ=255)
ggAATGCAGGGAGTACGCCTTCCTGACGCTGGACGACGAAGACGCG‑TGTGGCGGTCAACAGGCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGt < 2:467238/238‑1 (MQ=255)
gAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGCGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGCGAAGGAAGTGGTGGTGAAACCCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGGAACTGCCGAAAGAAAAAAAGATCGAAACCACcacacccggggcatatttcaggtg > 1:848906/1‑219 (MQ=255)
cACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAACCTGTCGGAAGAAAAAGGGAGCGGAACAACCGCCGCCGGGGCCTCTTTCCGTGcccgc > 1:804053/1‑235 (MQ=255)
ccccTTCCTGCCCGTGGGCGAGGAAGGCGGGCTGGGG‑GGTCAACAGCGGGGGGAAGACGGCATTGCGCGCACCCATAACGGGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCgg < 1:457368/237‑1 (MQ=255)
tCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGGAAAAGTGATAGATCACCCCGCAGCCGGCGCCTCTTTCAGTGCCGGGTATCTGGCGGTACGt > 2:669136/1‑239 (MQ=255)
ccTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACg > 2:710592/1‑237 (MQ=255)
ccTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAAATGCCGAAAGAAAAAGTGATAGCTACCACCGCAGCTGGGGACTCTTTCAGGGCCGGTTATCTGGCGGTACg > 2:497650/1‑237 (MQ=255)
ccTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGGTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAACTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACg > 2:341986/1‑237 (MQ=255)
ggACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCCCAGCTGGGGACCCCTTCAGTGCCGGGTATCTGGCgggcagtctggaagggg > 1:242957/1‑224 (MQ=255)
gacgacGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAAACTGCCGCAAGAAAAAGGGATCGATACCACCGCAGCTGGCGAATCTTTCAGTGCCGGGTATCTGGCGGTACGTCTGACAggcgg > 2:74914/1‑239 (MQ=255)
cggagtccgcgtgggg‑ggTCACGAGCCGGGGGAAGCAGTACTTTCGCGCCCCAATAACGCGGGCGTGAAAGAAGTGGTGGGGAAACGGGGGGCGGATTCTTGCCTGGTGTCCATTGATGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCa < 1:315447/222‑1 (MQ=255)
cgaAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAACGAAGTGGTGGTGCAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGAGGTTCCGGCGGTGAAACTGCCCAAATAAAAAAGGACCGCTAACCCCGCCACTGGGGAACTTTTCACGGCCCGTTATATGGCGGGACGTCAGAAAGGCGGCAggc > 1:735329/1‑237 (MQ=255)
aCGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACCCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGaa > 2:690712/1‑239 (MQ=255)
ggTGGAAGAGGTCATTGCGCGCACCCATAACGGGGGGGTGAAAGAAGTGGGGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCAcc < 1:113494/239‑1 (MQ=255)
atttGCGCGCCCCCATAACCGGGGCGTGAAAGAAGGGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGGCCATTGCTGGCGAAGGGTTAGTGGATGGTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGAATCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTa < 1:742985/237‑1 (MQ=255)
aTTGCGGGAACCCAAAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTa < 2:225313/238‑1 (MQ=255)
ttgggccACCCATAACGGGGGTGTGAAAGGAGTGGGGGTGAACCGCGGGGCGGATTCTCGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTTCCGAAAGAAAAAGTGAGCGATTCCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCg < 1:154836/233‑1 (MQ=255)
tGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGGCAAGCGGCAGGGCGGCAGACGCGGG‑CGAACGTGGGCACCAGACCGCCAGGACCg > 2:652855/1‑239 (MQ=255)
cgcACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGGGGGCCCCTGACCGCAAGTACCGTTAt > 2:571618/1‑239 (MQ=255)
cgcACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGGTAGCTGGCGGTACGTCTGACCGGCGGCAGCGCGGAAGACGCGGCGGAAACGGGGGccccggccacaagaaacggtat > 1:448977/1‑221 (MQ=255)
cgcACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCACCTGGCGCCCCTTTCAGTGCCGGTTATCTGGCGGTCAGTCTGACAGGCGGGCGCGCGGGAGAGACGGG‑GGAACATgggggcccgccccccaggacgcgttt > 1:215101/1‑216 (MQ=255)
aCCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGGACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GGAACGTGGGCACCTGACCGCAAGGACCGTTATTCa > 2:459704/1‑239 (MQ=255)
cagcggggCGTGAAAGAAGTGTGGGGGAAACGGGGGGGGGATTCTTGCCTGGGGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATcg < 1:264097/234‑1 (MQ=255)
ggCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGCACGCAAGAACCGCTATTCAGTATAGCGgggc > 2:328991/1‑239 (MQ=255)
ggCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGAAGCGGC‑GAAACGGGGGCACCTGGACGCAAGGCCCGGTATTCAGTATCgcgggcc > 2:153055/1‑236 (MQ=255)
ggCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCCCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTAtatgtcgct > 2:323841/1‑231 (MQ=255)
cGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCCCGGGAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTTTTCAGTATCGCGGcgcgg > 2:603804/1‑238 (MQ=255)
aagaagGGGTGGTGAAACGGGGGGCGGTTTCTTGCCTGGTGGCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATc < 1:571618/239‑1 (MQ=255)
ggtggggAACCCGGGGTCGGATTCTTGCCTGGTTTCCATTGCTGGCGAAGGGTTAGTGGATGTTCGGGCTGTGAACCTGCCGAAAGAAAAAGTGATCGACACCCCCGCAGCTGGCGACTCTTTCAGTGCCGTTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGt < 1:512314/238‑1 (MQ=255)
gggggggAAACGCGGGGGGGATTTGTGCCTGGGGTCCATTGCTGGCGAAGGGGTAGTGGATGGTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATCCCACCGCAGCTGGCGACTCTTTCAGGGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGt < 1:497650/232‑1 (MQ=255)
gtggtgAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCCCCGCAGCTGGCGACTCTTTCAGTGCCGGTTTTCTGGCGGTACGTCTGGCAGGCGGCAGCGCCGGAGACGCGGC‑GAAACGGGGGCACCCGACCGCAAGAACCCGTATTCAGTATCGCGGGGCGACTAACCcccgggg > 1:156667/1‑236 (MQ=255)
tgAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGG‑GAAACGGGGGCACCTGACCGCCAGGACCGTTATTCAGTATCTCGGCGCGTTTTTCCCCCCTGAgggg > 2:483957/1‑237 (MQ=255)
aCGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTTTCTGGCGGTACGTCTGGCAAGCGGGAGCGCGGAAGCCGCGGC‑GGAACGCGGGCACCTGACCCCCAGTACCGTTATTCACTATCGCGCGGCGGGTATCCcgccgggggggacga > 1:607734/1‑227 (MQ=255)
tttttgccgggttctcATTGCTGGCGAAGGGTTAGTGGAGTTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACg < 1:553906/223‑1 (MQ=255)
ttGCCTGGGGCCCATTGCTGGGGAAGGGTTAGGTGATGTTCCGGCGGTTAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGGCTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑AAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACgcagc < 2:898020/239‑1 (MQ=255)
gCCTGGTGTCCATTGGTGGCGAAGGGTTAGTTGATGTCTCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCat < 2:218521/239‑1 (MQ=255)
ggTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GGAACGTGGGCACCCGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACgaagccatagc > 2:526124/1‑233 (MQ=255)
tgtCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGGAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGACGACGCGGC‑GAAACGTGGGCCCCTGACCGCAAGTACCGTTATTCAGGATCGCGGCGCGGTTATCCCGCGGGAGGGGATGCCCCCGGAAACGCAGCAATTGCaa > 1:871416/1‑239 (MQ=255)
tgtCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGGGAGGCGAGGCCCGCGTAAACGCAGCATATGCaa > 2:447822/1‑239 (MQ=255)
tgtCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGAGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGGGAGGCGATGCCAGCGGAAACGCAGCCTATGCaa > 2:584449/1‑239 (MQ=255)
tgcccATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATCCCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCa < 2:512245/235‑1 (MQ=255)
gtgccATTGCTGGGGAAGGGTTAGTGGATGTTCCGGTGGTTAACATGCCGAAAGTAAAAGTGATCGATACCTCCGCAGCGGGCGACTCTGGCAGTGGCGGTTATCGGGCGGGACGTCTGACCGGCGGCGGCGCGGAGGACGGGGC‑GAAACGTGGGCACCTGGCCGCAAGTGCCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGCCGATGCGAGCGTAAACGCAGCATATGCa < 1:802771/235‑1 (MQ=255)
cATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAgg < 2:156667/239‑1 (MQ=255)
cATTGCTGGCGAAGGGTTAGTGGATGGTCCGGCGGTTAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAgg < 2:435274/239‑1 (MQ=255)
aatGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGc < 2:29159/237‑1 (MQ=255)
aTTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGc < 2:213169/239‑1 (MQ=255)
aTTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGc < 2:197797/239‑1 (MQ=255)
aTTGCGGGCGAAGGGTTAGTGGATGTTCCGGGGGTGAAACTGCCGAAAGAAAAAGTGACGGATGCCACCGGAGCGGGCGACTCTTTCAGGGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGc < 1:74914/239‑1 (MQ=255)
tggaaaggtttattgcgttttCCGGGGGTGAAACGGCCGAAAGAAAGAGTGGTCGATCCCCCCGGAGGTGGCGACTCATTCAGGTGCGGTGAACTGGCGGGACGGCTGACAGGCAGCAGCGCGGAAGACGCGGA‑GAAGCGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATa < 1:125788/220‑1 (MQ=255)
gCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTCTTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGGTaa > 2:127134/1‑239 (MQ=255)
gCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATa < 2:263130/238‑1 (MQ=255)
ttAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTa < 2:463652/238‑1 (MQ=255)
ggATTTTCCGGTGGTGAAACTGCCGAAAGAAAAAGGTGTCGAAACCGCCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCct < 2:282812/238‑1 (MQ=255)
ggATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCct < 2:848906/238‑1 (MQ=255)
tGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTAAGTCTGACAGGCGGCCGCGCGGAAGACGCGGC‑GGAACGTGGGCACCTGACCGCACGTACCGGTATTCAGTATCGCGGCCCGATTATCCCCCGTGAGGGGGGGCCCACGTAAAAGCAGCCCATGCAAAAGGCTggggaaaagtttaacccccca > 1:131664/1‑219 (MQ=255)
ttCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACCGGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGGGAGGCGATTCCAGCGTAAACGCCGCATATGCAAAAGGCCGGATAAAGTGTTACCCCTCTATcc > 2:456919/1‑239 (MQ=255)
ggcggTGAAACTGCCGAAAGAAAAAGGGACCGATCCCCCCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCACAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt < 1:710592/239‑1 (MQ=255)
cggTCAAACTCTCGAAAGAAAAACTGTTGGTTTCCCCCGCCGTCGGCGGCTCTTTCAGTGCCGGTTATCTGGGGGGACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa < 1:338828/239‑1 (MQ=255)
agTGAAACTGCCGAAAAAAAAAGGGATCGATACCACCGAAGCTGGCGACTCTTTCCGTGCCGGTTATCTGGCGGTACGTCTGGCAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCCCCTGGCCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa < 2:567856/237‑1 (MQ=255)
gTGAAACTGGCGAAAGAAAAAGTGATCGATTCCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt < 2:841695/238‑1 (MQ=255)
gTGAAACTGCCGAAAGAAAAAGTGATCGATACCCCCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt < 2:871416/238‑1 (MQ=255)
gTGAAACGGCCGAAAGAAAAAGTTATCGAGACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt < 2:604029/238‑1 (MQ=255)
aCTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTGCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaa < 2:607734/239‑1 (MQ=255)
cTGCCGAAAGAAAAATGGACCGATCCCCCCGCAGGTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa < 1:526124/239‑1 (MQ=255)
cTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa < 2:131664/239‑1 (MQ=255)
cGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGGGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGAGTTACACCTCTATCCAGCCCATCCATAAATa > 2:206506/1‑237 (MQ=255)
|
GAAGAGACACAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGG‑GGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGC‑GAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATA > NC_000913/3679949‑3680408
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
