Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A136 F1 I1 R1 21 250.8 15742942 95.7% 15065995 76.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 4,163,755 T→C L967P (CTC→CCC)  rpoB → DNA‑directed RNA polymerase subunit beta

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*REL6064,163,7550TC100.0% 672.3 / NA 152L967P (CTC→CCC) rpoBDNA‑directed RNA polymerase subunit beta
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (116/36);  total (116/36)

Only 100 of 172 total aligned reads displayed.

AAACGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCTCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACAA  >  REL606/4163682‑4163827
                                                                         |                                                                        
aaaCGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCg                                                                        >  1:1610118/1‑76 (MQ=255)
aaaCGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCg                                                                        <  1:5360542/76‑1 (MQ=255)
aaaCGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCg                                                                        <  2:4446197/76‑1 (MQ=255)
 aaCGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGa                                                                       <  1:4177546/76‑1 (MQ=255)
  aCGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGaa                                                                      <  1:5559944/76‑1 (MQ=255)
  aCGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGaa                                                                      >  1:3264737/1‑76 (MQ=255)
    gTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGc                                                                    >  1:7142709/1‑76 (MQ=255)
    gTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGc                                                                    <  1:2311029/76‑1 (MQ=255)
       cgcTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCggg                                                                 >  2:4265800/1‑76 (MQ=255)
        gcTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCgggc                                                                >  2:3350843/1‑75 (MQ=255)
        gcTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGt                                                                >  1:131102/1‑76 (MQ=255)
         cTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTc                                                               >  2:489504/1‑76 (MQ=255)
          tGGAAATCTAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCt                                                              <  2:2279366/76‑1 (MQ=255)
          tGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCt                                                              >  1:4670173/1‑76 (MQ=255)
          tGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCt                                                              <  2:2903692/76‑1 (MQ=255)
          tGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCt                                                              <  2:267975/76‑1 (MQ=255)
          tGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCt                                                              >  2:1791343/1‑76 (MQ=255)
          tGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCt                                                              <  1:1997599/76‑1 (MQ=255)
           ggAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTg                                                             >  1:2876659/1‑76 (MQ=255)
           ggAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTg                                                             >  1:1921053/1‑76 (MQ=255)
           ggAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTg                                                             >  2:3251255/1‑76 (MQ=255)
           ggAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTg                                                             >  1:6497507/1‑76 (MQ=255)
             aaaTCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGtt                                                           >  2:671115/1‑76 (MQ=255)
             aaaTCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGtt                                                           <  2:4089031/76‑1 (MQ=255)
              aaTCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTc                                                          >  2:7255789/1‑76 (MQ=255)
               aTCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCa                                                         <  1:5810154/76‑1 (MQ=255)
                tCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAg                                                        <  2:6567657/76‑1 (MQ=255)
                tCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAg                                                        >  1:3158093/1‑76 (MQ=255)
                 cGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAATTGCAGATCCCCGAAGCGGGTCTGTTCAGc                                                       <  1:6335608/76‑1 (MQ=255)
                 cGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGc                                                       >  1:3341750/1‑76 (MQ=255)
                    agaaATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGt                                                    >  1:824417/1‑76 (MQ=255)
                      aaaTGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTAt                                                  >  2:6655003/1‑76 (MQ=255)
                      aaaTGCAGCTAAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTAt                                                  <  2:818084/76‑1 (MQ=255)
                        aTGCATCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATcc                                                <  1:3016290/76‑1 (MQ=255)
                        aTGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATcc                                                <  1:1452126/76‑1 (MQ=255)
                        aTGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATcc                                                >  1:7599162/1‑76 (MQ=255)
                         tGCAGCTCAAACAGGCGAAGAAAGCCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCg                                               <  1:4570055/76‑1 (MQ=255)
                         tGCAGCTAAAACAGGCGAAGAAAGCCCTTTCTGAAGACCGGCAGACCCCCGAAGCGGGTCTGTTCAGCCGTATCCg                                               <  2:5422730/76‑1 (MQ=255)
                           cAGCTCAACCAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtg                                             <  1:4029099/76‑1 (MQ=255)
                           cAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtg                                             >  2:4991402/1‑76 (MQ=255)
                               tCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGTAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtgctgt                                         >  1:4540043/1‑76 (MQ=255)
                               tCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtgctgt                                         >  1:6460236/1‑76 (MQ=255)
                               tCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtgctgt                                         >  1:4314151/1‑76 (MQ=255)
                                cAAACAGGCGAAAAAAGCCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtgctgtg                                        <  1:5647861/76‑1 (MQ=255)
                                 aaaCAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCgtgctgtgc                                       >  1:4852946/1‑76 (MQ=255)
                                   aCAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGtgctgtgctg                                     >  1:1008350/1‑76 (MQ=255)
                                    cAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTgg                                    >  1:1012611/1‑76 (MQ=255)
                                     aGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGt                                   >  2:5738294/1‑76 (MQ=255)
                                     aGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGt                                   >  1:2318377/1‑76 (MQ=255)
                                     aGGCGAAAAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGt                                   <  1:6767170/76‑1 (MQ=255)
                                       gCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAg                                 >  2:3344895/1‑76 (MQ=255)
                                       gCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAg                                 >  1:903082/1‑76 (MQ=255)
                                       gCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAg                                 >  2:7180239/1‑76 (MQ=255)
                                        cGAAGAAAGCCTTCTCTGAAGACCTGCAGATCCCGGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGc                                <  2:683816/76‑1 (MQ=255)
                                         gaagaaAGCCCTGTCTGAAGAACTGAAGTCCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGcc                               <  1:7384356/76‑1 (MQ=255)
                                         gaagaaAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGcc                               >  1:3740978/1‑76 (MQ=255)
                                         gaagaaAGACCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGcc                               >  1:640687/1‑76 (MQ=255)
                                         gaaaaaAGACCTGTCTGAAGAACTGCGGACCCCGGAGGCGGGTCTGTCCAGCCGTATCCGTGCTGTGCTGGTAGcc                               <  2:748704/76‑1 (MQ=255)
                                          aagaaagaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCg                              >  1:7615959/1‑76 (MQ=255)
                                          aagaaagaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCg                              >  2:6638346/1‑76 (MQ=255)
                                          aagaaagaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCg                              >  1:5342176/1‑76 (MQ=255)
                                          aagaaaccCCTGTCTAAAAACCTGCGGCCCCCCGAAGGGGGTTTTTTCAGCCGTATCCGTGCTGTGCTGGTAGCCg                              <  2:1483207/76‑1 (MQ=255)
                                           agaaagcCCTGTCGGAAGAACTGCAGACCCCCGAGGGGGGTCGTTCCAGCCGTATCCGTGCTGTGCTGGTAGCCgg                             <  2:1319560/76‑1 (MQ=255)
                                           agaaagaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCgg                             >  1:2171273/1‑76 (MQ=255)
                                             aaagaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTg                           >  2:5179381/1‑76 (MQ=255)
                                               agaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGc                         >  2:3113764/1‑76 (MQ=255)
                                                gaCCTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCg                        >  1:6117660/1‑76 (MQ=255)
                                                  ccTGTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGtt                      >  1:547651/1‑76 (MQ=255)
                                                     ttCTGAAGAACTGCAGACCCCGGAAGGGGTTCTGTCCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGaa                   <  2:1967700/75‑1 (MQ=255)
                                                     gTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGaa                   >  1:5846391/1‑76 (MQ=255)
                                                     gTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGaa                   >  1:4961189/1‑76 (MQ=255)
                                                     gTCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGaa                   >  2:5583379/1‑76 (MQ=255)
                                                      tcggaagaaCTGAAGTTCCCCGAGGCGGGTCTTTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAg                  <  1:7697297/73‑1 (MQ=255)
                                                      tCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAg                  >  1:681389/1‑76 (MQ=255)
                                                      tCTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAg                  >  2:4519061/1‑76 (MQ=255)
                                                       cTGAAGACCTGCAGACCCCCGAAGCGGGTCTGTCCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGc                 <  1:1457475/76‑1 (MQ=255)
                                                       cTGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGc                 >  2:6198513/1‑76 (MQ=255)
                                                        tGAAGAACTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGGTGGAGCt                >  1:4478090/1‑76 (MQ=255)
                                                         gaagaaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTg               >  1:7003712/1‑76 (MQ=255)
                                                         gaagaaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTg               >  1:2782486/1‑76 (MQ=255)
                                                         gaagaaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTg               >  1:2375069/1‑76 (MQ=255)
                                                          aagaaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTga              >  2:409848/1‑76 (MQ=255)
                                                          aagaaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTga              >  2:3699341/1‑76 (MQ=255)
                                                            gaaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTgaga            >  2:5766496/1‑76 (MQ=255)
                                                             aaCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGaa           >  1:7170817/1‑76 (MQ=255)
                                                              acggCAGACCCCGGAAGCGGGTCTTTCCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAg          <  1:65921/73‑1 (MQ=255)
                                                              aCTGCAGATCCCCGAGGGGGGTCTTTCCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAg          <  1:3406621/76‑1 (MQ=255)
                                                              aCTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAg          >  2:6126760/1‑76 (MQ=255)
                                                              aCTGCAGACCCCCGAAGCGGGTCTGTCCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAg          <  1:7412898/76‑1 (MQ=255)
                                                               cTGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGc         >  1:5267758/1‑76 (MQ=255)
                                                               cTGCAGATCCCCGAAGCGGGCCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGCGGCGTTGAAGCTGAGAAGc         >  2:5813892/1‑76 (MQ=255)
                                                                tGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCt        >  1:5718091/1‑76 (MQ=255)
                                                                tGCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCt        >  1:2779328/1‑76 (MQ=255)
                                                                 gCAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTc       >  1:5042699/1‑76 (MQ=255)
                                                                  cAGATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCg      >  2:4755304/1‑76 (MQ=255)
                                                                    gATCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGAc    >  2:3631296/1‑76 (MQ=255)
                                                                     aTCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACa   >  1:2939038/1‑76 (MQ=255)
                                                                      tCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACaa  >  1:4946585/1‑76 (MQ=255)
                                                                      tCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACaa  >  1:2701349/1‑76 (MQ=255)
                                                                      tCCCCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACaa  >  1:1574474/1‑76 (MQ=255)
                                                                         |                                                                        
AAACGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCTCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACAA  >  REL606/4163682‑4163827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A