Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A56 F1 I1 R1 16 62.6 4005459 97.2% 3893306 75.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
MC JC REL606 4,097,564 Δ4 bp coding (6‑9/846 nt) glpF ← glycerol facilitator

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 4097564 4097567 4 50 [0] [0] 51 glpF glycerol facilitator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 40975630 (0.000)49 (0.780) 34/150 1.0 100% coding (10/846 nt) glpF glycerol facilitator
?REL606 4097568 = 0 (0.000)coding (5/846 nt) glpF glycerol facilitator

GATK/CNVnator alignment

N/A