mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 92,879 | C→T | Q148* (CAG→TAG) | yabB → | hypothetical protein |
| RA | 433,524 | A→T | I7F (ATC→TTC) | hupB → | HU, DNA‑binding transcriptional regulator, beta subunit |
| RA | 1,305,479 | A→C | V254G (GTA→GGA) | cls ← | cardiolipin synthetase |
| RA | 1,329,516 | C→T | H33Y (CAC→TAC) | topA → | DNA topoisomerase I |
| JC | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
| RA | 2,193,779 | G→T | L143I (CTT→ATT) | yeiB ← | conserved inner membrane protein |
| RA | 3,021,983 | (A)9→8 | coding (702/1140 nt) | ECB_02821 ← | hypothetical protein |
| RA | 3,145,726 | G→A | intergenic (+57/‑138) | dnaG → / → rpoD | DNA primase/RNA polymerase sigma factor |
| RA | 3,570,953 | G→T | D52Y (GAT→TAT) | uspA → | universal stress global response regulator |
| RA | 3,762,741 | A→T | K662I (AAA→ATA) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 3,872,885 | G→T | R384S (CGC→AGC) | glmS ← | D‑fructose‑6‑phosphate amidotransferase |
| RA | 3,875,632 | (T)7→8 | intergenic (‑66/+287) | glmU ← / ← atpC | bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon |
| MC JC | 3,894,997 | Δ6,934 bp | IS150‑mediated | rbsD–[yieO] | rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO] |
| MC JC | 4,097,564 | Δ4 bp | coding (6‑9/846 nt) | glpF ← | glycerol facilitator |
| RA | 4,162,569 | A→T | I572F (ATC→TTC) | rpoB → | DNA‑directed RNA polymerase subunit beta |
| JC JC | 4,524,522 | IS186 (+) +6 bp | coding (494‑499/549 nt) | fimA → | major type 1 subunit fimbrin (pilin) |