Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A107 F1 I1 R1
|
19 |
326.9 |
20855348 |
93.1% |
19416328 |
75.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
REL606 |
3,535,528 |
(GCTG)3→4 |
coding (448/597 nt) |
yhhF → |
predicted methyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | REL606 | 3,535,515 | 1 | . | G | 84.4%
| 223.2
/ 39.0
| 64 | coding (435/597 nt) | yhhF | predicted methyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (0/10); new base G (0/54); total (0/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-03 |
| * | REL606 | 3,535,515 | 2 | . | G | 84.4%
| 220.3
/ 39.0
| 64 | coding (435/597 nt) | yhhF | predicted methyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (0/10); new base G (0/54); total (0/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.84e-03 |
| * | REL606 | 3,535,515 | 3 | . | C | 84.4%
| 212.9
/ 39.9
| 64 | coding (435/597 nt) | yhhF | predicted methyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (0/10); new base C (0/54); total (0/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.50e-04 |
| * | REL606 | 3,535,515 | 4 | . | T | 84.4%
| 226.4
/ 34.9
| 64 | coding (435/597 nt) | yhhF | predicted methyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (0/10); new base T (0/54); total (0/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.07e-02 |
Only 100 of 108 total aligned reads displayed.
GCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑GGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACGGTCTG > REL606/3535440‑3535572
||||
gCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAc < 2:9188575/76‑1 (MQ=255)
gCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAc > 2:10281449/1‑76 (MQ=255)
gCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAc < 1:7370545/76‑1 (MQ=255)
gCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAc < 1:4489621/76‑1 (MQ=255)
cATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTTGGAGAGACCATAAATTAACCGCAAGATAAC‑‑‑‑g > 1:2745170/1‑76 (MQ=255)
cATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑g < 2:643387/76‑1 (MQ=255)
cATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑g < 2:5886279/76‑1 (MQ=255)
cATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑g < 1:4544257/76‑1 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTTGAAGAGACGATAAATTTACTGGAAGATAAA‑‑‑‑gg > 1:4391107/1‑76 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTTCTGGAAGATAAA‑‑‑‑gg > 2:771671/1‑76 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑gg > 1:2484745/1‑76 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑gg < 2:7496585/76‑1 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑gg > 1:2421106/1‑76 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑gg > 2:3509373/1‑76 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑gg < 1:7205247/76‑1 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAA‑‑‑‑gg > 2:4095784/1‑76 (MQ=255)
ataataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAAAGACGATAAAATTACTGGAAGATAAA‑‑‑‑gg > 1:2039821/1‑76 (MQ=255)
taataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTTGAAGAGACGATAAATTTACTGGAAGATAAA‑‑‑‑ggc > 2:8044740/1‑76 (MQ=255)
taataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggc < 1:5915535/76‑1 (MQ=255)
taataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggc < 1:1122490/76‑1 (MQ=255)
taataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑agc > 2:2977257/1‑76 (MQ=255)
aataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggct > 2:10194909/1‑76 (MQ=255)
aataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggct > 1:5499862/1‑76 (MQ=255)
aataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggct > 1:4519573/1‑76 (MQ=255)
aataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGAAGATAAATTTACTGGAAGATAAC‑‑‑‑ggct > 1:2696815/1‑76 (MQ=255)
aataTCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAAACGATAAATTTACTGGGAGATAAC‑‑‑‑gggt > 1:1844021/1‑74 (MQ=255)
atatCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctg < 1:7566825/76‑1 (MQ=255)
atatCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctg < 1:9728169/76‑1 (MQ=255)
atCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTTGAAGAGACGATAAAATTACTGGAAGAGAAA‑‑‑‑ggcgggg > 1:1522635/1‑75 (MQ=255)
atCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctggg > 1:10280665/1‑75 (MQ=255)
atCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑c < 1:9684819/76‑1 (MQ=255)
atCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑c < 1:8144648/76‑1 (MQ=255)
atCGTGTTTGTCGATCCACCGGTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑c < 2:2528746/76‑1 (MQ=255)
tCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑ct < 2:7411347/76‑1 (MQ=255)
tCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑ct < 1:174206/76‑1 (MQ=255)
cgggtTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑ctg < 1:9192339/73‑1 (MQ=255)
cGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctggggg > 1:4219669/1‑73 (MQ=255)
cGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctggggg > 1:9093288/1‑73 (MQ=255)
cGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑ctg < 1:6165137/76‑1 (MQ=255)
cGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAAAGACGATAAATTTACTGGAAGATAAA‑‑‑‑ggctggggg > 1:9388026/1‑73 (MQ=255)
gtTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑ggctgg‑‑‑‑ctggct < 2:8063797/76‑1 (MQ=255)
tttGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctg < 1:9354754/76‑1 (MQ=255)
tttGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctg < 1:7155633/76‑1 (MQ=255)
tttGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctg < 1:2866737/76‑1 (MQ=255)
tttGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctg < 1:5409581/76‑1 (MQ=255)
ttGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctgg < 1:5010270/76‑2 (MQ=255)
tGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctggc < 2:5531884/76‑3 (MQ=255)
gTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctggct < 2:3820240/76‑4 (MQ=255)
gTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑Ggctgg‑‑‑‑ctggctggct < 2:2539676/76‑4 (MQ=255)
cgccgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGAtt < 1:563084/76‑1 (MQ=255)
gccgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGAttt < 1:9430896/76‑1 (MQ=255)
gccgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGAttt < 1:6763137/76‑1 (MQ=255)
gccgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGAttt < 1:1789077/76‑1 (MQ=255)
ccgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTa < 2:2627680/76‑1 (MQ=255)
cgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTAt < 1:1204323/76‑1 (MQ=255)
cgTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTAt < 1:2160810/76‑1 (MQ=255)
ggCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTc < 2:676284/76‑1 (MQ=255)
ggCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTc < 2:8781346/76‑1 (MQ=255)
ggCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTc < 2:418783/76‑1 (MQ=255)
gCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCg < 1:8546458/76‑1 (MQ=255)
gCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCg < 1:1200578/76‑1 (MQ=255)
cTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGa < 1:3421148/76‑1 (MQ=255)
cTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGa < 1:3308498/76‑1 (MQ=255)
cTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGa < 1:5197108/76‑1 (MQ=255)
tGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGaaa < 1:7309646/76‑1 (MQ=255)
tGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGaaa < 2:9534272/76‑1 (MQ=255)
tGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGaaa < 2:4405548/76‑1 (MQ=255)
gTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAg < 2:6351561/76‑1 (MQ=255)
gTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAg < 1:6419679/76‑1 (MQ=255)
gTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAg < 2:406553/76‑1 (MQ=255)
gTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAg < 1:6050657/76‑1 (MQ=255)
gTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAg < 2:5256648/76‑1 (MQ=255)
gTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑GGCTGGCTGTCTGGCTGACGAAGCCCTGATTTATGTCGAAAg < 1:6831454/76‑1 (MQ=255)
ttAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGc < 2:5899365/76‑1 (MQ=255)
tAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCg < 1:3448933/76‑1 (MQ=255)
tAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCg < 1:4267474/76‑1 (MQ=255)
agaagaGACGATAAATTTACTGGAAGTTAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGa < 1:8666168/76‑1 (MQ=255)
agaagaGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGa < 1:2851965/76‑1 (MQ=255)
agaagaGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGa < 2:850604/76‑1 (MQ=255)
gaagaGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGaa < 1:4251997/76‑1 (MQ=255)
aagaGACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACCAAGCCCTGATTTATGTCGAAAGCGAAg < 1:2917772/76‑1 (MQ=255)
agagACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGt < 2:5266168/76‑1 (MQ=255)
agagACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGt < 1:6165440/76‑1 (MQ=255)
agagACGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGt < 1:8248725/76‑1 (MQ=255)
gaCGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGa < 1:9949265/76‑1 (MQ=255)
aCGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaa < 2:8278839/76‑1 (MQ=255)
aCGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaa < 2:8829308/76‑1 (MQ=255)
aCGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaa < 1:9778457/76‑1 (MQ=255)
cGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaa < 2:7857832/76‑1 (MQ=255)
cGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaa < 2:5430237/76‑1 (MQ=255)
cGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaa < 1:6399461/76‑1 (MQ=255)
cGATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaa < 1:6748399/76‑1 (MQ=255)
gATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaaa < 1:3312542/76‑1 (MQ=255)
gATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaaa < 2:5962454/76‑1 (MQ=255)
gATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaaa < 1:1868220/76‑1 (MQ=255)
gATAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGaaaa < 2:2629721/76‑1 (MQ=255)
tAAATTTACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACg < 2:672538/76‑1 (MQ=255)
tttACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACGGTCt < 2:5499862/76‑1 (MQ=255)
tttACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACGGTCt < 2:2738935/76‑1 (MQ=255)
ttACTGGAAGATAACGGCTGGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGCCGAAAACGGTCTg < 2:5744177/76‑1 (MQ=255)
||||
GCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAAC‑‑‑‑GGCTGG‑‑‑‑CTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACGGTCTG > REL606/3535440‑3535572
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
