Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A31 F999 I0 R1
|
22 |
6.7 |
608417 |
40.4% |
245800 |
128.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
3,815,859 |
Δ82 bp |
|
[rph] |
[rph] |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
3815859 |
3815940 |
82 |
7 [0] |
[0] 7 |
[rph] |
[rph] |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3815858 | 0 (0.000) | 6 (0.970) |
6/234 |
0.1 |
100% |
intergenic (‑90/+5) |
pyrE/rph |
orotate phosphoribosyltransferase/truncated RNase PH |
| ? | NC_000913 |
3815941 = |
0 (0.000) | coding (609/687 nt) |
rph |
truncated RNase PH |
GATK/CNVnator alignment
N/A
