Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I3 R1
|
53 |
201.3 |
10250884 |
92.1% |
9441064 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,506,193 |
(A)8→9 |
coding (907/1119 nt) |
yjhC → |
GFO/IDH/MOCA family putative oxidoreductase. NAD(P)‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,506,185 | 1 | . | A | 82.8%
| 472.9
/ 96.8
| 158 | coding (899/1119 nt) | yjhC | GFO/IDH/MOCA family putative oxidoreductase. NAD(P)‑dependent |
| Reads supporting (aligned to +/- strand): ref base . (12/15); new base A (72/58); total (85/73) |
| Fisher's exact test for biased strand distribution p-value = 3.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 177 total aligned reads displayed.
GCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATAT > NC_000913/4506087‑4506281
|
gCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑a < 1:394295/100‑1 (MQ=255)
gCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑a < 2:4776268/100‑1 (MQ=255)
cATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCGTATGGTCATCCAGG‑‑aa < 2:4908023/100‑1 (MQ=255)
ttttttGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa < 1:11106/100‑1 (MQ=255)
ggTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaac > 2:1237683/1‑98 (MQ=255)
ggTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaac < 1:4474414/100‑3 (MQ=255)
ggTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaac > 1:3789415/1‑98 (MQ=255)
ggTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaac < 1:2029982/100‑3 (MQ=255)
ggTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaaa > 1:4253969/1‑98 (MQ=255)
gTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAa‑ca‑c > 1:2314873/1‑100 (MQ=255)
gTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAa‑aa‑c < 1:1431243/100‑1 (MQ=255)
tCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAACA‑AAa‑ca‑c > 1:3334985/1‑100 (MQ=255)
ccATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaacacc < 1:1883705/100‑6 (MQ=255)
ccATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑aaaa‑a‑aaaacacc < 1:2188316/100‑6 (MQ=255)
cATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCa < 1:2797802/100‑1 (MQ=255)
cATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCAt > 1:5011645/1‑100 (MQ=255)
aTGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCAt < 1:634696/100‑1 (MQ=255)
aaaCACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTAt > 2:3979049/1‑100 (MQ=255)
aaaCACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCATTATg < 1:2306869/100‑1 (MQ=255)
aaCACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCATTATgg < 1:3178973/100‑1 (MQ=255)
aaCACAAGAAGAAGATGATGATCGTCGAAAAAGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAAGA‑AAAA‑A‑AAA‑CA‑CCATTATg < 2:1562184/100‑1 (MQ=255)
acacAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATgg > 1:1578002/1‑100 (MQ=255)
acacAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCATTATGGc < 2:3408588/100‑1 (MQ=255)
acaAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCt > 1:3746015/1‑100 (MQ=255)
acaAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTAAAAAAGAA‑AAAA‑A‑AAA‑CA‑CCATTATGGCt < 2:4108321/100‑1 (MQ=255)
agaagaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGc > 2:1026778/1‑100 (MQ=255)
agaagaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGc > 2:3462094/1‑100 (MQ=255)
agaagaTGATGATCGTCGGAAAGGCACTATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCAATATGGCTCGCCAg > 2:4742334/1‑100 (MQ=255)
agaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGcccg > 1:2943937/1‑98 (MQ=255)
agaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCAAAAAAAAAA‑A‑AAA‑CA‑CCATTATGACTTGCCa < 2:1214023/100‑1 (MQ=255)
agaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGACATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAg > 2:2441908/1‑100 (MQ=255)
gaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGt < 1:4414340/100‑1 (MQ=255)
aagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGtt > 2:1075452/1‑100 (MQ=255)
agaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑TCATTATGGCTTGCCAGttt > 2:1151810/1‑100 (MQ=255)
gatgatgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTta > 2:1983187/1‑100 (MQ=255)
tgatgatCGTCGTAAAAGCCATATGACCTCAGAAATGAAGGGCTCTATAGCATATGGTCATACAAG‑‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTtaata < 2:1419454/100‑1 (MQ=255)
tgatgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTtaat > 2:4510001/1‑100 (MQ=255)
atgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTtaataa > 1:1051636/1‑100 (MQ=255)
atgatCGTCGGAAAGGCAATATGAACTCAGAAATGGGTGGCGCTATATCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTtaataa < 2:3500797/100‑1 (MQ=255)
tgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAg > 2:2111126/1‑100 (MQ=255)
tgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGCTTAATAAg > 1:480776/1‑100 (MQ=255)
gatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGa > 2:4534241/1‑100 (MQ=255)
gatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGa > 2:322069/1‑100 (MQ=255)
gatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑AGAAA‑CA‑CCATTATGGCTTGCCAGTTtaatagaa > 1:2083208/1‑97 (MQ=255)
atCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCTAGTTTAATAAGaa > 2:4018111/1‑100 (MQ=255)
cgtcgGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAg < 1:4603727/100‑1 (MQ=255)
gtcgGAAAGGCAATATGACCTCAGAACTGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAACA‑AAA‑CA‑CCATTATGGCATGCCATATTTATAAGaacac > 1:3541151/1‑97 (MQ=255)
gtcgGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAgg < 1:5036072/100‑1 (MQ=255)
gaggAAAGGCAAAATGACCTCAGAAAAGGATGGCGCTATAGCATATGGTCATCAAGAA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGga < 2:3900296/98‑1 (MQ=255)
cgGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGgag < 1:2141111/100‑1 (MQ=255)
gAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGAc < 2:2911087/100‑1 (MQ=255)
aaGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGt < 2:3577768/100‑1 (MQ=255)
aGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGtt > 1:52319/1‑100 (MQ=255)
gaaaTATGACCTCAGAAATGTATGGCTCTATAGCATATGTTCATCTAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCCTGCCAGTTTAATAAGAAAGGAGACGTTAt < 1:4821064/98‑1 (MQ=255)
atatGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATtcc < 2:2136460/100‑1 (MQ=255)
atGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATtcctc < 1:2137178/100‑1 (MQ=255)
atGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCAAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATtcctc < 2:3650143/100‑1 (MQ=255)
atGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCAAAGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATtcctc < 2:1386149/100‑1 (MQ=255)
tGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATtcctcc > 2:721037/1‑100 (MQ=255)
tGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATtcctcc > 2:895047/1‑100 (MQ=255)
gACCTCAGAAATGGATGGCGCTATAGCATATGAAAAAAAAAAA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCa < 2:1941293/100‑1 (MQ=255)
aCCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTACTCCTCCat > 2:2995605/1‑100 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGTCAGTATAATAAAAAAGGTGATATTAATCCTCCaaa > 1:4040536/1‑98 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCcta > 1:2921772/1‑100 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCata > 1:614437/1‑100 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCata < 1:496510/100‑1 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAAAAAGGAGACGTTATTCCTCCata > 1:1971134/1‑100 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCataa > 2:4679806/1‑100 (MQ=255)
ccTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAAG‑‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTCCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCataa > 1:4314589/1‑100 (MQ=255)
tCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCataat > 2:3784260/1‑100 (MQ=255)
cAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCataata < 1:4502884/100‑1 (MQ=255)
cAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAAAAAGAAAGGAGACGTTATTCCTCCataata > 2:81883/1‑100 (MQ=255)
gAAATGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTCCCAGGTTAATAAGCAAGGGGAGGTTATTTTTACATAATTTc > 1:2641513/1‑100 (MQ=255)
aaaTGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATcc < 1:760634/100‑1 (MQ=255)
aaaTGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATca > 1:2984884/1‑99 (MQ=255)
aaaTGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGGTTAATAAAAAAGGAGACGTTATTCCTCCATAATATcc > 2:1961825/1‑100 (MQ=255)
aaTGGATGGCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGGCAGTTTAATAAAAAAGGAAACATTATTCCTCCAAAATATCct > 2:1606305/1‑100 (MQ=255)
atggatggCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCctc < 1:4023695/100‑1 (MQ=255)
atggatggCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCctc < 2:3705333/100‑1 (MQ=255)
ggatggCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTACCAGTTTAATAAGAAAAGAGACGTAATTCCCCCATCATATCctccg > 2:2565723/1‑98 (MQ=255)
attgcgcTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCtgtg < 1:4214185/97‑1 (MQ=255)
tggCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAACCA‑CCATTATGGCTTGCCAGTTTAATAAGATAGGAGACGTTATTCCTCCATAATATCCTCTgtgg > 1:4988910/1‑100 (MQ=255)
ggCGCTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTCATAAGAAAGGAGACGTTATTACTCCATAATATACTCtgttgt > 1:85246/1‑100 (MQ=255)
gcgcTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTgtggtg < 1:4845670/100‑1 (MQ=255)
cgcTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAGAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGc < 1:3134173/100‑1 (MQ=255)
cgcTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGATACGTTATTCCTCCATAATATCCTCTGTGGTGc > 2:2131332/1‑100 (MQ=255)
gcTATAGCATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCa > 1:2379917/1‑100 (MQ=255)
cATATGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CTATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTg < 1:4680986/100‑1 (MQ=255)
tatGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCATTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCTTCTGTGGTGCAAAACCTgaa > 2:2805896/1‑100 (MQ=255)
tatGATCATCCAGG‑‑AAAA‑A‑AAA‑GACCCATTATGGCTTGCCAGTTTAATAAGAATGTAGACGTTATTCCTCCATAATAGCCTGTGTGGTGCAAAACCTgaa < 2:4868763/100‑1 (MQ=255)
atGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTgaag < 1:3639122/100‑1 (MQ=255)
atGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTgaag < 1:2590311/100‑1 (MQ=255)
tGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTgaaga > 2:3162209/1‑100 (MQ=255)
tGGTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTgaaga > 2:1336575/1‑100 (MQ=255)
ggTCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTgaagaa > 1:76044/1‑100 (MQ=255)
tCATCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAagaaga < 1:1177813/100‑1 (MQ=255)
cagccAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATACCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGAt < 1:3500610/97‑1 (MQ=255)
aTCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGAtt > 1:2985815/1‑100 (MQ=255)
aTCCAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGAtt > 1:1653010/1‑100 (MQ=255)
ccAGGA‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATtat > 2:4986086/1‑100 (MQ=255)
|
GCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGG‑‑AAAA‑A‑AAA‑CA‑CCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATAT > NC_000913/4506087‑4506281
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
