Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,101,594 |
T→G |
A10A (GCA→GCC) |
yggN ← |
DUF2884 family putative periplasmic protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,101,594 | 0 | T | G | 99.0%
| 717.2
/ NA
| 205 | A10A (GCA→GCC) | yggN | DUF2884 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base T (1/1); major base G (132/69); minor base A (0/2); total (133/72) |
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 208 total aligned reads displayed.
TCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTT > NC_000913/3101500‑3101690
|
tCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGggctgc > 1:341498/1‑100 (MQ=255)
aCCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccg > 2:1919470/1‑100 (MQ=255)
ccTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgc > 1:4728192/1‑100 (MQ=255)
ccTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgc > 2:3041843/1‑100 (MQ=255)
ccTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgc > 2:2798210/1‑100 (MQ=255)
ccTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGGCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgc > 1:437886/1‑100 (MQ=255)
cTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgcc > 2:494122/1‑100 (MQ=255)
cTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgcc < 1:2685773/100‑1 (MQ=255)
cTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTgccgcc > 2:2062258/1‑100 (MQ=255)
tGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCca < 2:2425868/100‑1 (MQ=255)
gCACGGTTTGCGGGCTGACAATCACATCGTCCCGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcag < 2:2256029/100‑1 (MQ=255)
gCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcag > 2:1320274/1‑100 (MQ=255)
cACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcagc < 2:1264669/100‑1 (MQ=255)
aCGGTTTTCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcagca > 2:2197135/1‑100 (MQ=255)
aCGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcagca > 2:1492365/1‑100 (MQ=255)
tggTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcagcag > 1:5064933/2‑100 (MQ=255)
cGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcagcag > 1:589063/1‑100 (MQ=255)
cGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCcagcag < 2:420396/100‑1 (MQ=255)
ggTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCagcagc > 1:4760339/1‑100 (MQ=255)
ggTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCagcagc > 2:412652/1‑100 (MQ=255)
gTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAgcagca > 1:4223251/1‑100 (MQ=255)
cGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTg < 2:3171109/100‑1 (MQ=255)
gggCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTgc > 1:1140313/1‑100 (MQ=255)
ggCTGAGAATCACATCGTCACGCGGCGTGAGGCTGCACTGGTAGTAGGCGAGAGCGGTCATTGCCGACACTGAAAGGGCTGCCGCCAGCAGCAGTCTgcg < 2:5171599/100‑1 (MQ=255)
ggCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTgcg > 1:163714/1‑100 (MQ=255)
gCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTgcgc < 2:4756662/100‑1 (MQ=255)
cTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGca < 1:1267585/100‑1 (MQ=255)
cTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGca < 2:3834221/100‑1 (MQ=255)
tGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGcat > 1:3439535/1‑100 (MQ=255)
tGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGACAGCAGCATTTTGCGcat < 1:205139/100‑1 (MQ=255)
gACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGcatc > 1:5263137/1‑100 (MQ=255)
cAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCTGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGcatcat > 2:5375137/1‑100 (MQ=255)
cAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGcatcat > 2:755876/1‑100 (MQ=255)
cAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGcatcat > 1:2606188/1‑100 (MQ=255)
tCACATTGTGACGCGGCGGGACGCTGCACTGGTAATCGGCGTGAGCGGTCATTGCCGTCACTTAAAGGGCTGCCGCCAGCAGCATTTTGCACATCATAGt > 2:2532270/1‑100 (MQ=255)
tCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGt < 1:4304365/100‑1 (MQ=255)
acaTCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCt < 1:2825168/100‑1 (MQ=255)
cagcGTCACGCCGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCtt > 1:1920312/4‑100 (MQ=255)
caTCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCtt > 1:3290513/1‑100 (MQ=255)
aTCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTc < 2:4658197/100‑1 (MQ=255)
gTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCt > 1:2738883/1‑100 (MQ=255)
cACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCa < 2:3676514/100‑1 (MQ=255)
cgcgGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAg > 1:902072/1‑100 (MQ=255)
cgcgGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAg < 2:5088839/100‑1 (MQ=255)
ggcgTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGaaa < 2:2933670/100‑1 (MQ=255)
gcgTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGaaaa > 2:3764138/1‑100 (MQ=255)
cgTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGaaaaa > 1:557977/1‑100 (MQ=255)
gTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGaaaaaa > 1:692235/1‑100 (MQ=255)
gTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGaaaaaa < 1:3777648/100‑1 (MQ=255)
tGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAAt > 2:924425/1‑100 (MQ=255)
tGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAAt > 1:3549529/1‑100 (MQ=255)
cGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAg > 1:2131527/1‑100 (MQ=255)
cTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGc > 1:5545487/1‑100 (MQ=255)
tgtaCTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGcc > 2:193334/4‑100 (MQ=255)
naCTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAg > 1:4416407/2‑100 (MQ=255)
cACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAg < 1:1183726/100‑1 (MQ=255)
cTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCa > 2:1310104/1‑100 (MQ=255)
cTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCGGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCa > 2:5425982/1‑100 (MQ=255)
ggTCGTCGTCTTAAGCGGCCATTGCCGCCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGCCTTCCCTGAAGCAAAACTCAGGCCAGCAtt > 2:2032610/1‑100 (MQ=255)
ggTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCAtt > 2:608434/1‑100 (MQ=255)
tAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTg > 1:3157713/1‑100 (MQ=255)
aGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGc > 1:4145294/1‑100 (MQ=255)
gTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCt > 2:1855378/1‑100 (MQ=255)
gTCGGCATGAGCGGTCATCGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCt > 1:4640876/1‑100 (MQ=255)
tCGGCGTGAGCGGTCATTGCCGTCACTGAAGGGGCTGCCGACAGCAGCATTTTGCGCATCATAGTAAAAAAAAAAAAAAAAATCAGGCCAGCATTTGCTg < 2:2076642/100‑1 (MQ=255)
cGGCGTGAGCGGTCATTGCCGTCACAGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTACTgg > 1:4991193/1‑100 (MQ=255)
ggCGTAAACGGTCCTTGCCGTCACTGAAACGGCTGCCGCCAGCAGCACTTTGCGCATCATAGTCTTCCCTCAACACAAAACCAGGCCCGCCTTAGCTGGc > 2:4531006/1‑100 (MQ=255)
gCGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGcc < 2:356005/100‑1 (MQ=255)
cGTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGccc > 2:1727483/1‑100 (MQ=255)
gTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCTCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCATGCCAGCAAATGCTGGcctg < 2:1127341/100‑3 (MQ=255)
gTGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGcccc > 1:1383709/1‑100 (MQ=255)
tGAGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCAAATGCTGGcctga < 2:433133/100‑4 (MQ=255)
aGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGa > 1:3723646/1‑100 (MQ=255)
aGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCAAATGCTGGcctgatt < 2:3788926/100‑6 (MQ=255)
aGCGGTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCAGTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGa < 2:4586605/100‑1 (MQ=255)
ggTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTg > 1:215593/1‑100 (MQ=255)
ggTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTg < 2:348306/100‑1 (MQ=255)
ggTCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTg < 2:2639530/100‑1 (MQ=255)
tCATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGAt < 1:1240820/100‑1 (MQ=255)
cATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATa > 1:3602941/1‑100 (MQ=255)
cATTGCCGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATa > 1:2948915/1‑100 (MQ=255)
ctccGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACa < 2:2840789/98‑1 (MQ=255)
ccGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACaaa > 1:1416494/1‑100 (MQ=255)
cGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg > 1:3050356/1‑100 (MQ=255)
cGTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg > 2:1489910/1‑100 (MQ=255)
gTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGt < 1:102161/100‑1 (MQ=255)
gTCACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATAATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGCTTGATAACACAGt > 1:4253215/1‑100 (MQ=255)
gatcTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGGTAACAAAGTa < 2:5070276/97‑1 (MQ=255)
cACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAc > 2:4914434/1‑100 (MQ=255)
cACTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAc < 2:3595960/100‑1 (MQ=255)
aCTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcg > 2:4481352/1‑100 (MQ=255)
cTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgc > 1:5409347/1‑100 (MQ=255)
cTGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgc > 1:938604/1‑100 (MQ=255)
tGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgcg > 1:176366/1‑100 (MQ=255)
tGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgcg > 1:887937/1‑100 (MQ=255)
tGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgcg < 2:852307/100‑1 (MQ=255)
tGAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgcg > 2:3355805/1‑100 (MQ=255)
gAAAGGGCTGCCGCCGGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCGCAGATTGATAACAGAGTACGCGt > 1:4849554/1‑100 (MQ=255)
gAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAGAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGt > 2:1537342/1‑100 (MQ=255)
gAAAGGGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTaagatc > 1:5141032/1‑95 (MQ=255)
|
TCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTT > NC_000913/3101500‑3101690
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
