Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,182,529 |
A→C |
intergenic (‑122/‑21) |
ygiD ← / → zupT |
4,5‑ DOPA‑extradiol‑dioxygenase/zinc transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,182,529 | 0 | A | C | 98.1%
| 746.5
/ ‑3.5
| 215 | intergenic (‑122/‑21) | ygiD/zupT | 4,5‑ DOPA‑extradiol‑dioxygenase/zinc transporter |
| Reads supporting (aligned to +/- strand): ref base A (2/2); new base C (103/106); total (106/109) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 215 total aligned reads displayed.
CATTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGGCA > NC_000913/3182432‑3182626
|
cATTTTGAGATCCTCACAATGCGCTTGTTCGGCGGAGTAAGAACCCGTATAACCATGCTGATTATAACCGGTTATTTTGACGATCTGACTGAAGGTGCAg > 2:165922/1‑100 (MQ=255)
aTTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGa < 2:1998454/100‑1 (MQ=255)
aTTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGa > 2:3925319/1‑100 (MQ=255)
ttttGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAt > 1:4492027/1‑100 (MQ=255)
ttttGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAt < 1:402639/100‑1 (MQ=255)
ttttGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAt > 1:3889354/1‑100 (MQ=255)
tttGATATCCTCACAATACGCTTGTTCGGCGGCGTCAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAtt < 1:258359/100‑1 (MQ=255)
tttGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAtt < 1:4527179/100‑1 (MQ=255)
tttGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAtt < 2:1082687/100‑1 (MQ=255)
ttGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGAttt < 2:957823/100‑1 (MQ=255)
atatCCTCACAATACGCTTGTTCGGCGGAGTACGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTtata > 1:3907082/1‑100 (MQ=255)
atatCCTCACAATACGCTTGTTCGGCGGAGTAAGAAGCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTtata < 1:5249499/100‑1 (MQ=255)
atatCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTtata < 2:3176757/100‑1 (MQ=255)
tCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAgg > 1:4782389/1‑100 (MQ=255)
tCACAATACGCTTGTTCGGCGGAGTAAGATCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGt > 1:5478319/1‑100 (MQ=255)
tCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGt < 1:2103277/100‑1 (MQ=255)
cacaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGtt > 1:2796584/1‑100 (MQ=255)
cacaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGtt > 1:4069888/1‑100 (MQ=255)
cacaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGtt > 2:4761329/1‑100 (MQ=255)
acaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTg < 2:2531706/100‑1 (MQ=255)
acaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTg > 1:2077684/1‑100 (MQ=255)
caATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGt > 1:2815550/1‑100 (MQ=255)
caATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGt > 2:1866277/1‑100 (MQ=255)
caATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGt > 2:1895655/1‑100 (MQ=255)
aaTACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTc < 1:1407230/100‑1 (MQ=255)
aCGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGAt < 2:798848/100‑1 (MQ=255)
aCGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGAt < 1:2129669/100‑1 (MQ=255)
aCGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGAt < 1:4497187/100‑1 (MQ=255)
gCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGt > 1:4504301/1‑100 (MQ=255)
gCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGt > 2:3129261/1‑100 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc < 2:1022047/100‑1 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc < 1:5392330/100‑1 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc < 2:1680415/100‑1 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc > 2:761273/1‑100 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc < 2:2600025/100‑1 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc > 1:3767824/1‑100 (MQ=255)
cTTGTTCGCCGGAGTAAGAACCAGGATAACAATGATGATGATCATCAGTTATGTTGACGGTCTGCCTGAAGATGCAGGCTTATAAGGAGTTTTCGATGTc > 2:4662672/1‑100 (MQ=255)
ttGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCa < 2:4590672/100‑1 (MQ=255)
ngTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAg > 1:4446534/2‑100 (MQ=255)
tCGGCGGAGTAAGAACCCGGATAACAATGATGATGCTCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTAc < 2:112294/100‑1 (MQ=255)
cggcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTAcc > 2:3572876/1‑100 (MQ=255)
cggcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTAcc > 2:549324/1‑100 (MQ=255)
ggcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACct > 1:1540161/1‑100 (MQ=255)
cggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACctct < 2:3500630/100‑1 (MQ=255)
ggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCtctc > 2:3210552/1‑100 (MQ=255)
ggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCtctc > 1:358543/1‑100 (MQ=255)
gAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCa > 1:4836325/1‑100 (MQ=255)
aGTAAGAACCCGGATAACACTGATGATGATCATCAGTTATTTTGACGTTCTGCCTGAAGGTGCAGCTTTATAGGGAGTTGTCGATGTCAGTACCTCTCAt > 2:1179375/1‑100 (MQ=255)
gTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCAtt > 1:1604219/1‑100 (MQ=255)
aaGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCt > 2:1570496/1‑100 (MQ=255)
gAACCCGGATAACAATGGTGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGa > 1:2635187/1‑100 (MQ=255)
gAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGa < 2:2726740/100‑1 (MQ=255)
aaCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAc < 1:3686118/100‑1 (MQ=255)
aaCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAc < 1:437939/100‑1 (MQ=255)
aCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAcc < 1:2878610/100‑1 (MQ=255)
aCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAcc < 2:2915634/100‑1 (MQ=255)
cccGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCa > 2:4903418/1‑100 (MQ=255)
ccGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCAt < 1:755622/100‑1 (MQ=255)
cGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATa < 2:1403813/100‑1 (MQ=255)
ggATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATAc < 2:1348415/100‑1 (MQ=255)
ggATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATAc > 1:1158479/1‑100 (MQ=255)
ggATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATAc < 2:3764623/100‑1 (MQ=255)
gATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACt < 1:4391595/100‑1 (MQ=255)
gATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACt < 2:735231/100‑1 (MQ=255)
tAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTgg > 1:175577/1‑100 (MQ=255)
aaCAATGATGGTGATCATCAGCTATTTGGACAATCTGCCTGAAGGTGCAGTTTTAAAAGGAGTTGTCGATGTCAGTACCAATCATTCTGACCATACTGGc < 2:532279/100‑1 (MQ=255)
aaCAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGc > 1:4289923/1‑100 (MQ=255)
aaCAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGc > 1:4220240/1‑100 (MQ=255)
aaTGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCggg < 2:2280986/100‑1 (MQ=255)
atgatgatgATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCgggg < 1:248353/100‑1 (MQ=255)
atgatgacgATCATCAGTTATTTTGACAATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCATTACCTCTCATTCTGACCATACTGGCgggg < 2:173854/100‑1 (MQ=255)
tgatgatgaTCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCggggg < 2:512736/100‑1 (MQ=255)
gatgatgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGc < 1:4100145/100‑1 (MQ=255)
gatgatgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGc > 1:3465674/1‑100 (MQ=255)
atgatgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCa < 1:5460410/100‑1 (MQ=255)
tgatgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAg < 1:412985/100‑1 (MQ=255)
atgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGcc < 1:2997218/100‑1 (MQ=255)
tgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCa > 1:937962/1‑100 (MQ=255)
atcatcAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACg > 2:4585797/1‑100 (MQ=255)
atcaGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGttt > 1:706887/1‑100 (MQ=255)
atcaGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGttt < 1:1916740/100‑1 (MQ=255)
aGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTAtt > 2:3782093/1‑100 (MQ=255)
gTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTg > 2:2842535/1‑100 (MQ=255)
gTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTg > 1:292477/1‑100 (MQ=255)
gTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTg < 2:4873764/100‑1 (MQ=255)
gTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTg > 1:5183721/1‑100 (MQ=255)
gTTATTTTGACGAAGGGGGTAAAGGTGGAGATTGATAAGGAGTTGTAGATGTCAGTACCTCTAATTCTGACGATACTGGCGGGGGCAGCCACGTTTATTg < 2:1560135/100‑1 (MQ=255)
aTTTTGACGATCTGCCTGAAGGTGCAGATGTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGgcg > 2:2196412/1‑100 (MQ=255)
tttGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGcgcg < 2:658114/100‑1 (MQ=255)
tttGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGcgcg < 2:4250590/100‑1 (MQ=255)
cGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTtct > 2:4512513/1‑100 (MQ=255)
cGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTtct > 2:5214289/1‑100 (MQ=255)
aTCTGCCTGAAGGAGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTATCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGTGCGCTTCTCg > 2:5044024/1‑100 (MQ=255)
tCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGTGCGTTTCTCgg < 1:1206833/100‑1 (MQ=255)
gCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGt > 2:3256126/1‑100 (MQ=255)
aaGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCg < 2:3853789/100‑1 (MQ=255)
aGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCgg < 1:1587351/100‑1 (MQ=255)
gTGCAGATTTATAAGGAGTTGTCGGTGTCAGTACCTTTGATTCTGACCCTATTGGCGGGGGCCGCTACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGGc < 2:395780/100‑1 (MQ=255)
gTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGGc > 1:4938431/1‑100 (MQ=255)
tGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGCTTATTGGCGCGTTTCTCGGCGTTCTCGGGCa > 1:3078674/1‑100 (MQ=255)
|
CATTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGGCA > NC_000913/3182432‑3182626
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
