Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,182,529 |
A→C |
intergenic (‑122/‑21) |
ygiD ← / → zupT |
4,5‑ DOPA‑extradiol‑dioxygenase/zinc transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,182,529 | 0 | A | C | 96.8%
| 503.8
/ ‑1.8
| 155 | intergenic (‑122/‑21) | ygiD/zupT | 4,5‑ DOPA‑extradiol‑dioxygenase/zinc transporter |
| Reads supporting (aligned to +/- strand): ref base A (3/2); new base C (83/67); total (86/69) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 156 total aligned reads displayed.
TCATTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGG > NC_000913/3182431‑3182624
|
aTTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGa < 2:1288690/100‑1 (MQ=255)
ttttGATATCCTAACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGAGGATCTGACTGAAGGTGCAGAt > 1:3368826/1‑100 (MQ=255)
tGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTta < 2:1031070/100‑1 (MQ=255)
tGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAAGTGCAGAttga < 2:3702891/100‑3 (MQ=255)
atatCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTtata < 2:1352816/100‑1 (MQ=255)
tatCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATaa < 2:1117883/100‑1 (MQ=255)
atCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAg < 2:2421227/100‑1 (MQ=255)
atCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAg < 2:2675647/100‑1 (MQ=255)
atCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAg < 2:1254827/100‑1 (MQ=255)
ttcTCACAATACGCTTGTTCGGCGGAGTAAGAACACGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAgg < 2:1774609/98‑1 (MQ=255)
tCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAgg > 2:641191/1‑100 (MQ=255)
tCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAgg > 1:888636/1‑100 (MQ=255)
tCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAgg > 2:2075923/1‑100 (MQ=255)
cTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAg < 1:823762/100‑1 (MQ=255)
tCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGt > 1:184903/1‑100 (MQ=255)
tCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGt > 1:265352/1‑100 (MQ=255)
tCACAAGACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGt < 2:3932373/100‑1 (MQ=255)
acaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTg < 2:1239786/100‑1 (MQ=255)
acaATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTg > 1:3271681/1‑100 (MQ=255)
aaTACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTc < 1:3459626/100‑1 (MQ=255)
gCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGt > 2:2916571/1‑100 (MQ=255)
gCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGt > 1:2572201/1‑100 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATCACAATGGTGATGAGCAACAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc < 2:3816043/100‑1 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc > 2:705577/1‑100 (MQ=255)
cTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc > 1:2863095/1‑100 (MQ=255)
attGTTCGGCGGAGTACGAACCCGGATAACAATGATGATGATAATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTc < 2:181862/99‑1 (MQ=255)
tGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAg > 1:1983270/1‑100 (MQ=255)
gTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGt > 1:1902781/1‑100 (MQ=255)
gTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGt > 2:739913/1‑100 (MQ=255)
gTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGt > 1:1035446/1‑100 (MQ=255)
cggcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTAcc > 1:2639326/1‑100 (MQ=255)
ggcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACct < 1:2515908/100‑1 (MQ=255)
gcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACctc < 2:2658248/100‑1 (MQ=255)
gcggAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACctc < 2:335437/100‑1 (MQ=255)
aGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCAt > 1:1441976/1‑100 (MQ=255)
gTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCAtt > 1:3620188/1‑100 (MQ=255)
gTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCAtt > 1:1954487/1‑100 (MQ=255)
gTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCAtt > 2:2595392/1‑100 (MQ=255)
gTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCAtt > 1:702017/1‑100 (MQ=255)
tAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTc < 1:1075778/100‑1 (MQ=255)
tAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTc < 1:408605/100‑1 (MQ=255)
aaGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCt > 1:2297969/1‑100 (MQ=255)
aaGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCt > 1:1801372/1‑100 (MQ=255)
aaGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCt > 2:2729967/1‑100 (MQ=255)
aGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTg > 1:1567144/1‑100 (MQ=255)
aGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTg < 1:731754/100‑1 (MQ=255)
aGAACCCGGATAACAATGATGATGAGCATCAGCTATATTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCCCATTCTg > 2:1026882/1‑100 (MQ=255)
aaCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTgcc > 2:2990664/1‑98 (MQ=255)
aaCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAc < 1:1429874/100‑1 (MQ=255)
ncccGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAcc > 1:206585/2‑100 (MQ=255)
aCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGTCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAcc < 2:3761483/100‑1 (MQ=255)
aCCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGAcc > 2:2502302/1‑100 (MQ=255)
cccGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCa > 1:967099/1‑100 (MQ=255)
ccGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCAt > 1:2299184/1‑100 (MQ=255)
ggATAACAATGATGATGATCGCCATTTATTTTGTCTTTGTGCCTGAAGGTGCAGATGTATAAGGAGTTGTCTATGTCAGTACCTTTCATGCTGACCATAc < 2:82841/100‑1 (MQ=255)
ggATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCATATTTATAAGGAGTTGTCGATGTCAGTACCTCTCTTTCTTACCATAc < 2:1777368/100‑1 (MQ=255)
ggATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATAc > 1:1707561/1‑100 (MQ=255)
gcaTAACAATGATGATGATCATCAGTTATTTGGACGAGCTGGCTGAAGGTGCAGATTTATAAGGAGTTGGCGATGTCAGTACCTCTCATTCTGACCATAc < 2:3496180/98‑1 (MQ=255)
gATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACt < 1:1290105/100‑1 (MQ=255)
gATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACt > 1:3273365/1‑100 (MQ=255)
aCAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCg > 2:2580083/1‑100 (MQ=255)
aCAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCg < 2:2120724/100‑1 (MQ=255)
cAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCgg > 1:3176260/1‑100 (MQ=255)
cAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCgg < 1:2755788/100‑1 (MQ=255)
cAATGATGATGATCATCAGTTATTTTGACGATCTCCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTATGACCATACTGGCgg > 2:13910/1‑100 (MQ=255)
aaTGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCggg < 2:447438/100‑1 (MQ=255)
atgatgatgATCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCgggg > 2:89069/1‑100 (MQ=255)
gatgatgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGc < 2:1191146/100‑1 (MQ=255)
atgatgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCa < 2:869893/100‑1 (MQ=255)
tgatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCa > 1:3339305/1‑100 (MQ=255)
gatCATCAGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCAc > 2:838634/1‑100 (MQ=255)
catcaGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGtt > 2:1191621/1‑100 (MQ=255)
catcaGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGtt > 1:3497650/1‑100 (MQ=255)
tcaGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTa < 1:955012/100‑1 (MQ=255)
caGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTAt > 2:924822/1‑100 (MQ=255)
caGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTAt > 2:486571/1‑100 (MQ=255)
caGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTAt > 1:50144/1‑100 (MQ=255)
aGTTATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGATTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGAGGGCAGCCACGTTTAtt > 2:2864012/1‑100 (MQ=255)
ggtATTTTGACGATCTGCCTGAAGGTGCAGATTTATGAGGAGTTGTAGATGGCAGTACCTCTCATTCTGACCGTACTGGCGGGGGCAGCCACGTTTATTg < 2:2207210/98‑1 (MQ=255)
ttATTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTgg < 2:1860873/100‑1 (MQ=255)
aTTTTTACGAGCTGCCTTAAGGTGCATATTTATAATGAGTTGTCGATGTCAGAACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGgcg < 2:3018443/100‑1 (MQ=255)
aTTTTGACGCTCTGCCAGAAGGTGCAGGTTTATAATGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGGAGTCACGTCTTTTgcct > 2:3864738/1‑97 (MQ=255)
aTTTTGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGgcg > 1:1565870/1‑100 (MQ=255)
ttttGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGgcgc < 1:3948284/100‑1 (MQ=255)
tttGACGATCTGCCTGAAGGTACAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGcgcg > 1:2565301/1‑100 (MQ=255)
ttGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGt < 2:3683951/100‑1 (MQ=255)
tGACGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGtt > 1:290321/1‑100 (MQ=255)
aCGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTtc > 2:1924769/1‑100 (MQ=255)
aCGATCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTtc < 1:2999577/100‑1 (MQ=255)
aTCTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTATGACCGTACTGGCGGGGGAAGCCAGGTTTATTGGCGCGTTTCTCg > 1:3816344/1‑100 (MQ=255)
cTGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGc < 2:635607/100‑1 (MQ=255)
tGCCTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCAGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCg > 2:3818948/1‑100 (MQ=255)
gCCTGAAGGTGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGt > 1:3764822/1‑100 (MQ=255)
ccTGAAGGTGCAGATTTATAAGGAGGTGTCGATGTCAGTACCTCTCATTCTGACCATATTGGCGGGGAACGCCACGGTGATTGGCGCGTTTCTCGGCGtt > 2:2290886/1‑100 (MQ=255)
cTGAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTtc < 2:763526/100‑1 (MQ=255)
gAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTtctc < 2:1056800/100‑1 (MQ=255)
gAAGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTtctc < 2:1057327/100‑1 (MQ=255)
aGGTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGTGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCgg < 2:1411934/100‑1 (MQ=255)
ggTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCggg < 2:1375738/100‑1 (MQ=255)
ggTGCAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCggg > 1:1099909/1‑100 (MQ=255)
|
TCATTTTGATATCCTCACAATACGCTTGTTCGGCGGAGTAAGAACCCGGATAACAATGATGATGATCATCAGTTATTTTGACGATCTGCCTGAAGGTGAAGATTTATAAGGAGTTGTCGATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGG > NC_000913/3182431‑3182624
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
