Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,399,779 |
A→C |
L67R (CTG→CGG) |
mreC ← |
cell wall structural complex MreBCD transmembrane component MreC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,399,779 | 0 | A | C | 98.3%
| 803.2
/ 1.9
| 232 | L67R (CTG→CGG) | mreC | cell wall structural complex MreBCD transmembrane component MreC |
| Reads supporting (aligned to +/- strand): ref base A (3/1); new base C (115/112); total (118/114) |
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 |
Only 100 of 234 total aligned reads displayed.
CTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGA > NC_000913/3399682‑3399875
|
tGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCcgcg < 1:4805602/100‑1 (MQ=255)
gTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGt > 2:5083973/1‑100 (MQ=255)
gTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGt > 2:3964930/1‑100 (MQ=255)
tttGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTc < 1:3394747/100‑1 (MQ=255)
gTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGc < 1:1390408/100‑1 (MQ=255)
gTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGc < 1:2841833/100‑1 (MQ=255)
gTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGc < 2:4795842/100‑1 (MQ=255)
gTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGc < 1:226148/100‑1 (MQ=255)
tATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCg > 1:5405049/1‑100 (MQ=255)
aTTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGa > 2:2625/1‑100 (MQ=255)
tctCCAAGCATTAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATCGGTCACGCGAGGCGCGCGTCTGCGATa < 1:4911723/98‑1 (MQ=255)
tGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATa > 1:4239055/1‑100 (MQ=255)
tGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATa < 1:3644066/100‑1 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATAc < 2:2895298/100‑1 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATAc > 1:3846398/1‑100 (MQ=255)
tCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACg < 1:5357084/100‑1 (MQ=255)
tCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATAcn < 1:347437/100‑2 (MQ=255)
ccAAGAATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGATTTCACGTTCTAATTGCTCACGCGAGGCCCGCGTCTGCGATaaga > 2:4842710/1‑97 (MQ=255)
gCATCAGCAGTTCACTGTTGTTCAGCAACGGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATc < 1:4509943/100‑1 (MQ=255)
cATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATcc > 2:3421941/1‑100 (MQ=255)
aTCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCa > 1:629740/1‑100 (MQ=255)
acagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAg < 2:3631236/99‑1 (MQ=255)
ccgcagTTCACTGTTTTTCCGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc < 2:72570/98‑1 (MQ=255)
cagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc < 2:1722204/100‑1 (MQ=255)
cagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc < 1:3053361/100‑1 (MQ=255)
agcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCa > 1:1529430/1‑100 (MQ=255)
gcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCaa > 2:4205289/1‑100 (MQ=255)
cagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAAt < 1:5251432/100‑1 (MQ=255)
cagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAAt < 1:1320642/100‑1 (MQ=255)
gTTCTCTGTTTTTTAGCAACACGCCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCTCGCGTCTGCGATACGCCATCCAGCAATTc < 2:1618470/100‑1 (MQ=255)
gTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTc > 1:3990978/1‑100 (MQ=255)
gTTCACTGTTTCTCAGCAGCAGTTCCAGACGTAACGCCCGGTTTTCAAGTTCTATTTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTc < 2:3742265/100‑1 (MQ=255)
ttaaCTGTGTTTCAGCAACAATCCCTGACGTAACGCCCGATTTTCAAGTCCTCAATTGTCACTCGAGGCCCTTGTCTGCGATACGCCATCCAGCAATACa < 2:898479/97‑1 (MQ=255)
ttCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCa > 1:2026043/1‑100 (MQ=255)
tCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCACGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCAc > 2:2782966/1‑100 (MQ=255)
cACTGTTTTTCAGCAACAGTTCGTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACg > 1:4666617/1‑100 (MQ=255)
aCTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACga > 2:2019564/1‑100 (MQ=255)
cTGTTTTTCAGCAACAGTTCCTGCCGTAACGCCCGGTCTTCAAGTTCTCATTGGTCACGCGAGGCCCCCGCCTGCGATCCGCCATCCAGCACTTCACgaa > 2:3007230/1‑99 (MQ=255)
tttttCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgaggag > 2:327476/1‑100 (MQ=255)
ttttCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGCGGAGc > 2:3793239/1‑100 (MQ=255)
tCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAtt > 2:5344083/1‑100 (MQ=255)
tCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAtt < 2:3334427/100‑1 (MQ=255)
aGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTgg < 2:3187122/100‑1 (MQ=255)
aGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTgg < 1:1965166/100‑1 (MQ=255)
aGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTgg < 1:3164993/100‑1 (MQ=255)
cAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGaa < 2:84684/100‑1 (MQ=255)
aaCAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGaaa < 2:5371572/100‑1 (MQ=255)
aGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACaa > 1:71049/1‑100 (MQ=255)
gTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACaaa > 1:4100720/1‑100 (MQ=255)
tCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGt > 2:1948346/1‑100 (MQ=255)
tCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGt < 1:1501428/100‑1 (MQ=255)
ccTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAACATTGGAAACAAAGTa > 1:1018153/1‑100 (MQ=255)
cTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAg > 2:4571065/1‑100 (MQ=255)
cTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAg < 2:1194523/100‑1 (MQ=255)
cTGACGTAACGCCCGGATTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAg > 2:5329418/1‑100 (MQ=255)
tGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGa < 2:3986007/100‑1 (MQ=255)
tGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGa < 2:1059869/100‑1 (MQ=255)
gACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGaa < 1:57256/100‑1 (MQ=255)
aCGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGaaa > 2:2338608/1‑100 (MQ=255)
gTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAgg > 2:1892130/1‑100 (MQ=255)
gTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAgg > 1:4966336/1‑100 (MQ=255)
tAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGa > 1:245742/1‑100 (MQ=255)
tAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGa > 2:4013296/1‑100 (MQ=255)
tAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGa > 1:1935794/1‑100 (MQ=255)
cGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTg < 2:1310602/100‑1 (MQ=255)
cGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTg > 1:4170516/1‑100 (MQ=255)
cGCCCGGATTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTg > 2:4332846/1‑100 (MQ=255)
gCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGa > 2:1124238/1‑100 (MQ=255)
nccGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAc > 1:4438037/2‑100 (MQ=255)
cccGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAc < 2:70282/100‑1 (MQ=255)
cccGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAc > 1:50812/1‑100 (MQ=255)
cccGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAc > 1:51169/1‑100 (MQ=255)
gTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 1:224332/100‑1 (MQ=255)
gTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 1:1486664/100‑1 (MQ=255)
gTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 1:4703412/100‑1 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 1:3341639/100‑1 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 1:1683236/100‑1 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 1:3303894/100‑1 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 1:1950545/100‑1 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 2:1393749/100‑1 (MQ=255)
tCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTAt > 2:5018509/1‑100 (MQ=255)
aaGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCACCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATcc > 1:4977507/1‑100 (MQ=255)
aGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCa < 1:5417019/100‑1 (MQ=255)
gTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCat < 1:3716745/100‑1 (MQ=255)
ttCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCata > 1:2357131/1‑100 (MQ=255)
ttCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCata < 2:5052650/100‑1 (MQ=255)
atCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCata < 2:3044004/99‑1 (MQ=255)
tCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCatat > 2:765586/1‑100 (MQ=255)
cTAATTGGTCACGCGAGGCCCGCGTCTGGGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCAtata < 1:748930/100‑1 (MQ=255)
cTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCAtata < 2:414651/100‑1 (MQ=255)
tAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATaa > 2:2233912/1‑100 (MQ=255)
aaTTTGTCACGCGAGGCCCGCGTCAGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAg < 1:2175990/100‑1 (MQ=255)
aaTTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAg > 1:3240411/1‑100 (MQ=255)
aaTTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAg > 2:1776318/1‑100 (MQ=255)
ggTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACg < 2:1568789/100‑1 (MQ=255)
tCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGa > 1:1807673/1‑100 (MQ=255)
cACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGAt < 1:916257/100‑1 (MQ=255)
cgcgAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGAttt > 1:2414656/1‑100 (MQ=255)
gAGGCCCGCGTCTGCGATACGCCATCCAGCAATCCGCGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGAc < 2:2377993/100‑1 (MQ=255)
gCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGa > 1:274504/1‑100 (MQ=255)
|
CTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGA > NC_000913/3399682‑3399875
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
