Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,399,779 |
A→C |
L67R (CTG→CGG) |
mreC ← |
cell wall structural complex MreBCD transmembrane component MreC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,399,779 | 0 | A | C | 99.5%
| 671.4
/ NA
| 191 | L67R (CTG→CGG) | mreC | cell wall structural complex MreBCD transmembrane component MreC |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (100/90); total (100/91) |
| Fisher's exact test for biased strand distribution p-value = 4.76e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 191 total aligned reads displayed.
CTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTG > NC_000913/3399682‑3399874
|
cTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGc > 1:2646768/1‑100 (MQ=255)
gTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGt > 1:3119772/1‑100 (MQ=255)
tttGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTc > 2:2770237/1‑100 (MQ=255)
ttGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTCATTGGTCACGCGAGGCCCGCGTCt > 2:3484555/1‑100 (MQ=255)
gTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGc > 1:2482343/1‑100 (MQ=255)
tATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCg > 1:570479/1‑100 (MQ=255)
tATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCg > 1:401408/1‑100 (MQ=255)
tATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCg > 2:2845542/1‑100 (MQ=255)
tATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCg < 1:3422438/100‑1 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTTACGCGAGGCCCGCGTCTGCGATAc > 2:768479/1‑100 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATAc > 1:3590323/1‑100 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATAc < 2:891646/100‑1 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATAc < 1:557898/100‑1 (MQ=255)
gTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATAc < 1:1375178/100‑1 (MQ=255)
ccAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGc < 2:354350/100‑1 (MQ=255)
cAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGcc > 2:1358287/1‑100 (MQ=255)
cAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGcc > 1:3933317/1‑100 (MQ=255)
cAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGcc > 2:1334254/1‑100 (MQ=255)
cAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGcc > 1:1232613/1‑100 (MQ=255)
aGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCAt < 1:1001703/100‑1 (MQ=255)
aTCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCa > 1:2503069/1‑100 (MQ=255)
aTCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCa < 1:605525/100‑1 (MQ=255)
aTCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCa > 2:1285793/1‑100 (MQ=255)
tCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAg < 1:3367558/100‑1 (MQ=255)
tCAGCAGTTCACTGGTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAg < 2:1502857/100‑1 (MQ=255)
cagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc > 2:1024190/1‑100 (MQ=255)
cagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc < 2:2637309/100‑1 (MQ=255)
cagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc < 1:3018658/100‑1 (MQ=255)
cagcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGc < 2:3312615/100‑1 (MQ=255)
agcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCa > 2:3285785/1‑100 (MQ=255)
gcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCaa > 1:99102/1‑100 (MQ=255)
gcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCaa > 1:2273374/1‑100 (MQ=255)
cagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAAt < 1:458917/100‑1 (MQ=255)
gTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTc > 2:1260899/1‑100 (MQ=255)
ttCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCa > 1:2934790/1‑100 (MQ=255)
tCACTGTTTTTCAGCAACAGTCCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCAc > 2:3162422/1‑100 (MQ=255)
cACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACg > 1:2893031/1‑100 (MQ=255)
cTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgag > 2:1803134/1‑100 (MQ=255)
gTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgagga > 1:3858156/1‑100 (MQ=255)
tttttCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgaggag > 2:487031/1‑100 (MQ=255)
ttttCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGc < 1:2143477/100‑1 (MQ=255)
ttCAGCAACAGTTCCTGACGTAACGCCCGTTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAt < 2:1628667/100‑1 (MQ=255)
ttCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAt < 1:3052420/100‑1 (MQ=255)
tCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAtt < 2:2322647/100‑1 (MQ=255)
aGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTgg > 2:1856033/1‑100 (MQ=255)
gCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGa > 1:1469311/1‑100 (MQ=255)
gCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGa > 2:56753/1‑100 (MQ=255)
gCAACAGCTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGa > 2:1735084/1‑100 (MQ=255)
cAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGaa > 2:1454977/1‑100 (MQ=255)
cAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGaa < 2:2652211/100‑1 (MQ=255)
aCAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAAc > 1:299284/1‑100 (MQ=255)
cAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACa > 1:2673912/1‑100 (MQ=255)
aGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAAGTGGTCACGCGAGGCCCGCGTCTGCAATACGCCATCCAGCAAATCACGAGGAGCATTGGAAACaa < 2:439018/100‑1 (MQ=255)
ttCCTGACGTAACGCCCGGATTTCAAGTTCTAATTGGTCACGCGAAGCCCGCGTCTGCGATACGCCATCCAGCAAGTCACGAGGAGCATTGGAAACAAAg > 2:1893105/1‑100 (MQ=255)
ctCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAg < 1:1763798/99‑1 (MQ=255)
ccTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTa > 2:1748590/1‑100 (MQ=255)
ccTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTa > 1:2819594/1‑100 (MQ=255)
cTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGCGGAGCATTGGAAACAAAGTAg > 2:86338/1‑100 (MQ=255)
cTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAg > 1:1025895/1‑100 (MQ=255)
cTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAg > 1:314163/1‑100 (MQ=255)
cTGACGGAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAg < 2:2444198/100‑1 (MQ=255)
tGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGa > 1:740639/1‑100 (MQ=255)
gACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGaa > 2:112036/1‑100 (MQ=255)
aCGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGaan < 1:3241889/100‑2 (MQ=255)
cGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAg < 1:57743/100‑1 (MQ=255)
aaCGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCAGCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGAc < 1:3475937/100‑1 (MQ=255)
gCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGa < 2:3230105/100‑1 (MQ=255)
gCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGa < 1:3532635/100‑1 (MQ=255)
gCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGa > 2:359627/1‑100 (MQ=255)
ctcGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGCTACGCGATCCAGCAATTCACGAGGAGTATTGGATACAAAGTAGAAAGGACTGAc < 2:3985417/98‑1 (MQ=255)
cccGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAc > 1:2436839/1‑100 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 2:2399442/100‑1 (MQ=255)
ttttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcgg < 1:1914058/100‑1 (MQ=255)
ttCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTa < 2:2799023/100‑1 (MQ=255)
tCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTAt < 1:380073/100‑1 (MQ=255)
aaGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATcc > 1:2762074/1‑100 (MQ=255)
aGTTCTACTTGGTCCCGCGACGCCCGCGTCAGCGATACGCCATCCCCCAATTCACCAGCGGCATCGCTAACACAGTAGCAAGGACTGACGGCGGTATCCa > 2:893966/1‑100 (MQ=255)
aGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCa > 1:2908361/1‑100 (MQ=255)
gTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCat < 2:2735726/100‑1 (MQ=255)
gTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCat < 1:447204/100‑1 (MQ=255)
ttCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCata < 1:1680481/100‑1 (MQ=255)
cTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCAtata < 1:2447189/100‑1 (MQ=255)
cTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCAtata > 1:2942301/1‑100 (MQ=255)
tacttGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATaa > 2:2278031/4‑100 (MQ=255)
aaTTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAg < 2:968028/100‑1 (MQ=255)
aaTTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAg < 2:2358704/100‑1 (MQ=255)
aTTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGt > 2:1339361/1‑100 (MQ=255)
ttGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTa < 1:1533491/100‑1 (MQ=255)
tGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTAc > 1:1830898/1‑100 (MQ=255)
ggTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACg < 2:2472633/100‑1 (MQ=255)
gTCACGCGAGGCCCACGTCTGCGATAAGCCATCCAGCAATTCACGAGAAGCATTTGAAACAAAGTAGAAAGGACTGACGGCGGTATTCATATAATTACgg > 2:3733663/1‑100 (MQ=255)
aCGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGAtt < 2:3912594/100‑1 (MQ=255)
aCGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGAtt > 1:786459/1‑100 (MQ=255)
cgcgAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGAttt > 1:2577896/1‑100 (MQ=255)
gcgAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTg < 2:2106726/100‑1 (MQ=255)
cgAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGa > 2:2345217/1‑100 (MQ=255)
gAGGCCCGCTTCTGCGATACGCCATCCAGCAATTCACGAGGAACATTGGAATCAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGAc < 2:433908/100‑1 (MQ=255)
gAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGAc < 1:158688/100‑1 (MQ=255)
gAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGAc < 2:1295671/100‑1 (MQ=255)
aGGCCCGCGGCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACt < 1:511461/100‑1 (MQ=255)
|
CTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTG > NC_000913/3399682‑3399874
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
