Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,655,917 |
(A)5→4 |
intergenic (‑15/+49) |
yhiD ← / ← hdeB |
putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,655,913 | 0 | A | . | 98.2%
| 1031.7
/ 9.5
| 224 | intergenic (‑11/+53) | yhiD/hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| Reads supporting (aligned to +/- strand): ref base A (3/1); new base . (114/106); total (117/107) |
| Fisher's exact test for biased strand distribution p-value = 6.23e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 |
Only 100 of 242 total aligned reads displayed.
GCTCCTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAAT > NC_000913/3655814‑3656012
|
gCTCCTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCa < 1:114916/100‑1 (MQ=255)
gCTCCTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCa < 2:2187754/100‑1 (MQ=255)
ccTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCaaaa > 2:1079092/1‑100 (MQ=255)
cTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCaaaag < 2:3560237/100‑2 (MQ=255)
cTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCaaaag < 2:4433418/100‑2 (MQ=255)
cTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCaaaag < 2:2854347/100‑2 (MQ=255)
ttGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCaaaagga < 2:2100641/100‑4 (MQ=255)
tGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCaaaaggag < 1:5092076/100‑5 (MQ=255)
gCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGagc < 2:3619000/100‑1 (MQ=255)
gcgcATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGagcagc < 2:1800968/100‑1 (MQ=255)
gcgcATTTGCCCTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGagcagc < 1:780055/100‑1 (MQ=255)
cgcATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAgcagca < 1:2581620/100‑1 (MQ=255)
cgcATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAgcagca < 2:1648888/100‑1 (MQ=255)
cATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAg > 2:2291214/1‑100 (MQ=255)
cATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAg < 1:3586328/100‑1 (MQ=255)
tttGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAgtt > 2:1974397/1‑98 (MQ=255)
tttGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGAt < 2:2044887/100‑1 (MQ=255)
tttGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGAt < 2:3910120/100‑1 (MQ=255)
ttGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATg < 2:5354738/100‑1 (MQ=255)
tGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATg‑g < 2:1433272/100‑1 (MQ=255)
tGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATg‑g < 1:4137238/100‑1 (MQ=255)
gCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑Gc < 2:5265733/100‑1 (MQ=255)
gCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAAGAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑Gc < 2:5323980/100‑1 (MQ=255)
ccTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCt < 1:3621896/100‑1 (MQ=255)
ccTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCt > 1:4109520/1‑100 (MQ=255)
tttCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCa > 1:3200804/1‑100 (MQ=255)
tttCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCa < 1:5470712/100‑1 (MQ=255)
tttCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCa > 1:3612448/1‑100 (MQ=255)
ttCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCaa > 2:2666324/1‑100 (MQ=255)
ccATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACt > 1:4272623/1‑100 (MQ=255)
cATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACtt < 1:101135/100‑1 (MQ=255)
aTGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTg > 2:3212421/1‑100 (MQ=255)
gCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GGTCAACTTGCt < 2:5060478/100‑1 (MQ=255)
ccAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTa > 1:3806002/1‑100 (MQ=255)
cAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTAc > 2:3356067/1‑100 (MQ=255)
cAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTAc < 2:2119840/100‑1 (MQ=255)
cAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAAATCTGCTGTCACATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTAc < 2:1744859/100‑1 (MQ=255)
aaTAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAACTGC‑AAAAGGATCAGAAAGATG‑GCTCAACTTGCTACt > 2:5195669/1‑100 (MQ=255)
aaTAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACt < 1:5557762/100‑1 (MQ=255)
aTAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCGGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTc > 2:1119675/1‑100 (MQ=255)
tAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTcc < 2:3521357/100‑1 (MQ=255)
gcgcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCtt < 1:1414063/100‑1 (MQ=255)
gcgcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCtt > 1:2761237/1‑100 (MQ=255)
gcgcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCtt < 1:4487300/100‑1 (MQ=255)
gcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGTTGAGC‑CATCTTGCTGCTCCtttt < 1:1996009/100‑1 (MQ=25)
gcCACAGGCAATGGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCtttt > 2:256288/1‑100 (MQ=255)
cacaGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTa > 2:3022069/1‑100 (MQ=255)
acaGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTAc < 1:2161952/100‑1 (MQ=255)
acaGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGAAGCAGCAAGATG‑GCTCAACTTGCTACCCCTTTTTAc > 2:2829507/1‑100 (MQ=255)
caGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTAc > 1:1556153/1‑100 (MQ=255)
caGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACt < 1:1864092/100‑1 (MQ=255)
caGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACt > 1:2408381/1‑100 (MQ=255)
ggCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTg > 2:510492/1‑100 (MQ=255)
aaTTGCCGCGAGTATACGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAAGTTGCTACTCCTTTTTACTTGCAc < 2:4603764/100‑1 (MQ=255)
aaTTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCAc > 2:1517515/1‑100 (MQ=255)
aTTGCCGCGAGTATAAGATGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCAcc < 1:5220112/100‑1 (MQ=255)
aTTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCAcc > 2:2418180/1‑100 (MQ=255)
ttGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAGATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCt < 1:5042417/100‑1 (MQ=255)
tGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTc < 2:3991928/100‑1 (MQ=255)
cgcgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAtt > 1:4623797/1‑100 (MQ=255)
cgcgAGTATAAGACGTATAATAAATTCTGAAAAAATAAAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAtt < 2:663759/100‑1 (MQ=255)
cgcgAGTATAAGACGTATAATAAATTAAAATAAAATAAAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAtt < 2:598228/100‑1 (MQ=255)
gcgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTa < 1:92969/100‑1 (MQ=255)
gTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTc > 2:4744124/1‑100 (MQ=255)
gTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTc > 1:3428653/1‑100 (MQ=255)
ataAGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCgg < 1:4600632/100‑1 (MQ=255)
aaGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCa > 1:4094995/1‑100 (MQ=255)
aaGACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCa > 2:1210770/1‑100 (MQ=255)
gACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAg < 2:3771079/100‑1 (MQ=255)
gACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAg < 1:3749799/100‑1 (MQ=255)
gACGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAg < 2:3431950/100‑1 (MQ=255)
cttataATAGATTCTGCTGTCATATAAAAATGC‑AAAAGGCGCAGTAAGATA‑GCTCAACTTGCTATTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTc < 2:1586469/98‑1 (MQ=255)
cGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTc > 1:1430067/1‑100 (MQ=255)
cGTATAATAAATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GATCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTc > 2:5020923/1‑100 (MQ=255)
taataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTa > 2:4972085/1‑100 (MQ=255)
taataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTa > 1:844068/1‑100 (MQ=255)
taataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTa > 1:1591805/1‑100 (MQ=255)
aataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAg > 1:1080286/1‑100 (MQ=255)
aataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAg < 1:624828/100‑1 (MQ=255)
aataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAg > 1:2329637/1‑100 (MQ=255)
ataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGa > 2:4493679/1‑100 (MQ=255)
ataaATTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGa < 2:4709794/100‑1 (MQ=255)
aaaTTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATg > 2:3876914/1‑100 (MQ=255)
aaaTTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATg > 2:4382739/1‑100 (MQ=255)
aaaTTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATg < 2:834935/100‑1 (MQ=255)
aaTTCTGCTGTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGc < 2:895058/100‑1 (MQ=255)
gctgTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAtt < 2:4162318/100‑1 (MQ=255)
ctgTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAttt > 1:2882945/1‑100 (MQ=255)
gTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAttttt > 1:2566859/1‑100 (MQ=255)
gTCATATAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAttttt > 2:1319032/1‑100 (MQ=255)
atatAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCGTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGaa > 1:5375570/1‑100 (MQ=255)
atatAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGaa > 2:743344/1‑100 (MQ=255)
atatAAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGaa < 2:2934332/100‑1 (MQ=255)
tataAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAg < 1:2344103/100‑1 (MQ=255)
ataAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg > 1:3152639/1‑100 (MQ=255)
ataAAAATGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg < 1:2088569/100‑1 (MQ=255)
aaaaTGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGtat > 2:5443506/1‑100 (MQ=255)
aaaaTGC‑AAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGtat > 1:1506699/1‑100 (MQ=255)
aagtaaaaaGGATTAGCAAGTTG‑AGCCATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATAc > 1:301394/5‑100 (MQ=18)
aaaaaGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAAt > 1:3320681/1‑100 (MQ=21)
|
GCTCCTTTGCCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAAT > NC_000913/3655814‑3656012
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
