Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,716,242 |
A→C |
V51V (GTT→GTG) |
bisC ← |
biotin sulfoxide reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,716,242 | 0 | A | C | 99.0%
| 728.1
/ ‑4.3
| 208 | V51V (GTT→GTG) | bisC | biotin sulfoxide reductase |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base C (105/100); total (106/102) |
| Fisher's exact test for biased strand distribution p-value = 2.42e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 208 total aligned reads displayed.
GAACAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGAACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCAACCAGC > NC_000913/3716145‑3716338
|
aaCAAATTGATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCAcc < 1:5312789/100‑1 (MQ=255)
aaCAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCAcc > 2:905938/1‑100 (MQ=255)
aaCAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCAcc < 2:70482/100‑1 (MQ=255)
cAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTg > 2:309043/1‑100 (MQ=255)
cAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTg > 1:3297997/1‑100 (MQ=255)
cAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTg > 1:1923800/1‑100 (MQ=255)
cAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTg < 2:678541/100‑1 (MQ=255)
aaTTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGt > 1:4553014/1‑100 (MQ=255)
aaTTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGt > 1:2423294/1‑100 (MQ=255)
aaTTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGt > 2:1653706/1‑100 (MQ=255)
ttCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTcg < 1:5019099/100‑1 (MQ=255)
cATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTcgcg > 1:804312/1‑100 (MQ=255)
cATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTcgcg < 2:1303316/100‑1 (MQ=255)
cATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTcgcg < 2:1586152/100‑1 (MQ=255)
cATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTcgcg < 1:3317896/100‑1 (MQ=255)
cTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAAcc < 2:3799101/100‑1 (MQ=255)
cccACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACcgcg > 1:1464014/1‑100 (MQ=255)
aCGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGctc < 1:2886175/100‑1 (MQ=255)
gAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTATCCGCGTATTGCTTTGCACCTGGTCGCGAACCGCGCTCTg < 2:455581/100‑1 (MQ=255)
gAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTg < 1:194966/100‑1 (MQ=255)
tGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCaa < 2:829235/100‑1 (MQ=255)
gCCTTGCGTGTTTTCCGGTGATGCAAGATAGCCTTTTCGCTCTTTTGGGAATCGTGCCCGCGCATTGCTGGGCACCTGGTCGCGAACCGCGCTCTGCAAg < 1:2030056/100‑1 (MQ=255)
gCCTTGCGGGTTTTGCGGTGACGCAAGAAAGCCTTTTCGCGCCATTGGAAATCGTACCCGCGTATTACTGTGCACCTGGTCGCGAACCGCGCTCTGCAAg < 2:299247/100‑1 (MQ=255)
gCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAg < 1:5425321/100‑1 (MQ=255)
ccTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCACgg > 1:4187078/1‑100 (MQ=255)
ccTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAgg > 2:2866129/1‑100 (MQ=255)
ccTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAgg > 2:3188782/1‑100 (MQ=255)
ccTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAgg > 2:4946444/1‑100 (MQ=255)
ccTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAgg > 1:4343323/1‑100 (MQ=255)
ttGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAg > 1:953536/1‑100 (MQ=255)
ttGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAg < 1:5533992/100‑1 (MQ=255)
ttGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAg < 2:583222/100‑1 (MQ=255)
tGCGGGTTTGCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGt < 2:3668854/100‑1 (MQ=255)
cGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGttt < 2:1162926/100‑1 (MQ=255)
cGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGttt < 1:1659200/100‑1 (MQ=255)
ggTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTc < 2:1934241/100‑1 (MQ=255)
ttttCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCa > 2:4782215/1‑100 (MQ=255)
tttCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCAt < 2:2354624/100‑1 (MQ=255)
tCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAGATCGTACCCGCGTATTGCTGTGCACCTGGTCCCGAACCGCGCTCTGCAAGGAGTTTTCCATTc < 1:4461507/100‑1 (MQ=255)
tCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTc > 1:4250440/1‑100 (MQ=255)
ccGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTcc < 1:4906456/100‑1 (MQ=255)
ccGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTcc > 1:3455953/1‑100 (MQ=255)
cGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGTTCTGCAAGGAGTTTTCCATTCCt > 2:5016250/1‑100 (MQ=255)
cGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGGTTTCCATTCCt > 2:3896039/1‑100 (MQ=255)
ggTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCtg < 2:4211671/100‑1 (MQ=255)
ggTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCtg < 2:3123232/100‑1 (MQ=255)
ggTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCtg < 2:1237222/100‑1 (MQ=255)
ggTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCtg < 2:4043262/100‑1 (MQ=255)
gTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCtgt < 1:3197989/100‑1 (MQ=255)
gACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTgg < 2:5397094/100‑1 (MQ=255)
gACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTgg < 1:3254632/100‑1 (MQ=255)
gACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTgg < 2:1902680/100‑1 (MQ=255)
gACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGAACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTgg < 2:4468237/100‑1 (MQ=255)
aCGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGc < 1:2200806/100‑1 (MQ=255)
cGCAAGAAAGCCTTTTCGCACCATTTGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCt > 2:278113/1‑100 (MQ=255)
cGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCt > 1:3538423/1‑100 (MQ=255)
cGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCt > 1:3070183/1‑100 (MQ=255)
gCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTa < 2:2609478/100‑1 (MQ=255)
gCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTa > 2:127167/1‑100 (MQ=255)
gCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTa > 1:2054732/1‑100 (MQ=255)
gCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTa > 1:2524789/1‑100 (MQ=255)
cAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTaa > 1:3985095/1‑100 (MQ=255)
aaaGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAAcgcg < 2:4172184/100‑1 (MQ=255)
aGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGcc < 1:4508880/100‑1 (MQ=255)
aGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGcc > 1:5521492/1‑100 (MQ=255)
aGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGcc < 1:1485252/100‑1 (MQ=255)
ccTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCAc < 2:3230886/100‑1 (MQ=255)
ttttCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCAcgc > 1:79556/1‑100 (MQ=255)
tttCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCAcgcg < 2:5483056/100‑1 (MQ=255)
cGCACCATTGGAAATCGTACCCGCGTATTGCTGTGATCCTGGTCCCGAACCGCGCGCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGc < 2:1079266/100‑1 (MQ=255)
gCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCt > 2:1681156/1‑100 (MQ=255)
gCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCt > 2:2656671/1‑100 (MQ=255)
gCACCATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCt > 1:755101/1‑100 (MQ=255)
aCCATTGGAAATCTTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTaa > 2:903935/1‑100 (MQ=255)
ccATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTaaa < 1:3650103/100‑1 (MQ=255)
ccATTGGAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTaaa < 1:2219797/100‑1 (MQ=255)
ggAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACgg > 1:1376625/1‑100 (MQ=255)
ggAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACgg < 2:72196/100‑1 (MQ=255)
ggAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACgg < 1:4896332/100‑1 (MQ=255)
gAAATCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGGGCTAAACACGGt < 2:1326897/100‑1 (MQ=255)
aTCGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTc < 2:2140035/100‑1 (MQ=255)
cGTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGc < 1:1318736/100‑1 (MQ=255)
gTACCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGcc > 2:162379/1‑100 (MQ=255)
gTACCCGCGTATTGCCGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGcc > 1:5059213/1‑100 (MQ=255)
aCCCGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGt > 1:3520233/1‑100 (MQ=255)
cccGCGTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTc > 1:4103776/1‑100 (MQ=255)
ccGCGTATTGCTGTGCACCTGGTCGCGAAGCGCGTTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCg < 1:5086565/100‑1 (MQ=255)
cgcgTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCgg < 2:4634002/100‑1 (MQ=255)
gcgTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGt > 1:876014/1‑100 (MQ=255)
cgTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGtt > 1:2131020/1‑100 (MQ=255)
gTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGttt > 1:3113608/1‑100 (MQ=255)
gTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGttt < 2:793905/100‑1 (MQ=255)
gTATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGttt < 2:4303217/100‑1 (MQ=255)
tATTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTc < 2:2580060/100‑1 (MQ=255)
aTTGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCa < 1:4033802/100‑1 (MQ=255)
ttGCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCaa < 2:3492996/100‑1 (MQ=255)
gCTGTGGACCTGGTCGCGCACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCAAcc > 1:4638989/1‑100 (MQ=255)
gCTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCAAcc > 1:86698/1‑100 (MQ=255)
cTGTGCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCAACCa > 1:1831161/1‑100 (MQ=255)
gtgCACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCAACCAGc > 2:2508715/1‑100 (MQ=255)
|
GAACAAATTCATCCTGCCCACGAATGCCTTGCGGGTTTTCCGGTGACGCAAGAAAGCCTTTTCGCACCATTGGAAATCGTACCCGCGTATTGCTGTGAACCTGGTCGCGAACCGCGCTCTGCAAGGAGTTTTCCATTCCTGTGGCTAACGCGCCACGCGAGCTAAACACGGTTTCGCCGTCGGTTTCAACCAGC > NC_000913/3716145‑3716338
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
