Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,807,410 |
T→G |
K230T (AAA→ACA) |
waaQ ← |
lipopolysaccharide core biosynthesis protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,807,410 | 0 | T | G | 99.5%
| 742.7
/ ‑5.1
| 209 | K230T (AAA→ACA) | waaQ | lipopolysaccharide core biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (104/104); total (104/105) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 |
Only 100 of 211 total aligned reads displayed.
CCCGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTTTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCG > NC_000913/3807314‑3807506
|
cccGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTg > 2:1811790/1‑100 (MQ=255)
cccGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTg > 2:4648256/1‑100 (MQ=255)
ccGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGtgttgt < 2:1698682/100‑1 (MQ=255)
cgcAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCg > 2:3466610/1‑100 (MQ=255)
gcAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGc > 2:3736164/1‑100 (MQ=255)
cAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCa > 2:3184944/1‑100 (MQ=255)
aGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCaa > 2:4403750/1‑100 (MQ=255)
naaTCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAc > 2:1425534/2‑100 (MQ=255)
gAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAc < 1:5023069/100‑1 (MQ=255)
gAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAc > 1:4007078/1‑100 (MQ=255)
aaTCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAcc < 1:1811742/100‑1 (MQ=255)
aTCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCt < 1:4898692/100‑1 (MQ=255)
cacaCGAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAcgtcgt > 1:4992999/1‑100 (MQ=255)
cacaCCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGt < 2:2926018/100‑1 (MQ=255)
cacaCCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGt > 2:1151409/1‑100 (MQ=255)
cacaCCAATAAAAAGCACTGCATGATCAATTAATGCAACCAGTTCAGGAAGACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGt > 1:242016/1‑100 (MQ=255)
acacCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTg < 1:454495/100‑1 (MQ=255)
ccAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCaa > 1:3977208/1‑100 (MQ=255)
acAATAAAAAGCAATGCATGATCACTTAATGCACCCAGTTCAGGAAGACGTGTTTTACCTGCAAGCCCAGTAATCGGAGATGTTTCTCAACCTCGTGCaa > 2:779697/2‑100 (MQ=255)
cgaTAAAAAGCACTGCATGATCAATTAATGCATCCAGTTCGGGAAAACGTGCTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAt < 2:4457280/98‑1 (MQ=255)
cAATAAAAAGCACTGCATGATCAATTAATGCACCAAGTTCAGGAAAACGTGTTATACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAt > 2:5078032/1‑100 (MQ=255)
aaTAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtc > 1:2916007/1‑100 (MQ=255)
aTAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtct < 1:2991606/100‑1 (MQ=255)
aTAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtct > 1:2413295/1‑100 (MQ=255)
tAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtctc > 2:3903607/1‑100 (MQ=255)
aaaaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTTGCAACCTCGTGCAATCTCa > 2:322327/1‑100 (MQ=255)
aaaaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCa < 2:2471901/100‑1 (MQ=255)
aaaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCAt > 2:4876229/1‑100 (MQ=255)
aaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATc < 2:5309761/100‑1 (MQ=255)
aaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCt < 2:3549877/100‑1 (MQ=255)
gCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTac > 2:3854426/1‑100 (MQ=255)
cACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTaca < 1:4783817/100‑1 (MQ=255)
cTGCATGCTCAATTAATGCACAAAAAAAAAAAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTAcaca < 2:2710171/100‑1 (MQ=255)
cTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTAcaca > 2:1673793/1‑100 (MQ=255)
cTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTAcaca < 2:2418463/100‑1 (MQ=255)
gCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAg > 1:2975183/1‑100 (MQ=255)
gCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAg > 1:2223022/1‑100 (MQ=255)
tGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCga > 2:3989475/1‑100 (MQ=255)
gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 1:3592873/1‑100 (MQ=255)
gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 1:2810065/1‑100 (MQ=255)
gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 1:830909/1‑100 (MQ=255)
gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 2:2124111/1‑100 (MQ=255)
aTCAATTAATGCACCCAGTTCAGGACAACGAGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgagc > 2:284917/1‑99 (MQ=255)
aTCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgaga < 1:2640738/100‑1 (MQ=255)
aTCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgaga < 2:3126218/100‑1 (MQ=255)
tCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGat < 1:693095/100‑1 (MQ=255)
aaTTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGatca > 2:4083119/1‑100 (MQ=255)
tgaaTGCACCCATTTCATGAAAACGTGGTGTACCTGCAAGGCCAGTAATGGGGTTTGTTTCGCAACCGCGGTCAATCTCATCTACACAAGCGAGatcagc < 1:5300531/98‑3 (MQ=255)
aaTGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTg > 1:5199856/1‑100 (MQ=255)
aaTGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTg > 2:1898409/1‑100 (MQ=255)
gCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGTTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCg < 2:1083584/100‑1 (MQ=255)
cACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCACTAATGGGCGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGa > 1:4955095/1‑100 (MQ=255)
aCCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAg > 1:878926/1‑100 (MQ=255)
ccAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAggg < 1:2075801/100‑1 (MQ=255)
ccAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAggg < 1:2624687/100‑1 (MQ=255)
cAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGc > 2:2327484/1‑100 (MQ=255)
cAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGc < 1:1112733/100‑1 (MQ=255)
aGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGcc < 1:1693658/100‑1 (MQ=255)
aGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGcc < 1:3211413/100‑1 (MQ=255)
ttCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCca < 1:2192060/100‑1 (MQ=255)
tCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCcac < 1:4153708/100‑1 (MQ=255)
cAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCcaca > 2:1366075/1‑100 (MQ=255)
ggAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAgg > 1:1245732/1‑100 (MQ=255)
gAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGt > 1:868058/1‑100 (MQ=255)
aaaaCGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGtt < 1:3537150/100‑1 (MQ=255)
aaCGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAg < 1:1285607/100‑1 (MQ=255)
aaCGTGTTTTACCTGCAAGGCCAGTAATGGGGGGTGTTTCGCGACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAg < 2:1070032/100‑1 (MQ=255)
aCGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGc < 2:419893/100‑1 (MQ=255)
cGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCACAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGca < 1:4074752/100‑1 (MQ=255)
gtgtTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGcac < 1:4320807/100‑1 (MQ=255)
gtTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACaa > 1:1507128/1‑100 (MQ=255)
ttttACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAAc > 1:3124571/1‑100 (MQ=255)
tACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGCTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTg > 2:4556079/1‑100 (MQ=255)
aCCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGa > 2:2524210/1‑100 (MQ=255)
aCCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGa > 2:1271913/1‑100 (MQ=255)
ccTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGAt > 2:2634070/1‑100 (MQ=255)
ccTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGAt < 2:2940126/100‑1 (MQ=255)
ccTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGAt < 2:2277405/100‑1 (MQ=255)
cTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATa > 2:1549174/1‑100 (MQ=255)
tGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAg < 1:3889994/100‑1 (MQ=255)
gCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGc < 2:2260535/100‑1 (MQ=255)
gCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGc > 1:2306013/1‑100 (MQ=255)
cAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGcc > 2:4981774/1‑100 (MQ=255)
aaGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGccn < 1:1444370/100‑2 (MQ=255)
aaGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCt < 1:5051798/100‑1 (MQ=255)
ggCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCg > 2:652763/1‑100 (MQ=255)
gCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGc > 2:1308145/1‑100 (MQ=255)
cAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTg > 2:3156917/1‑100 (MQ=255)
aGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGt < 1:1015037/100‑1 (MQ=255)
gTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGtt > 1:472996/1‑100 (MQ=255)
aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 1:2140211/100‑1 (MQ=255)
aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 2:3830169/100‑1 (MQ=255)
aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 1:1511958/100‑1 (MQ=255)
aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 2:1488026/100‑1 (MQ=255)
tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg > 1:3291839/1‑100 (MQ=255)
tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg < 1:3762712/100‑1 (MQ=255)
tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg < 1:4837631/100‑1 (MQ=255)
tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg > 1:1211171/1‑100 (MQ=255)
gggTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAgc > 1:5488075/1‑100 (MQ=255)
ggTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAgcg > 1:42078/1‑100 (MQ=255)
|
CCCGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTTTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCG > NC_000913/3807314‑3807506
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
