Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I51 R1
|
223 |
69.9 |
1534784 |
95.1% |
1459579 |
214.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,714,488 |
A→C |
L636W (TTG→TGG) |
bisC ← |
biotin sulfoxide reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,714,488 | 0 | A | C | 97.9%
| 154.6
/ ‑3.8
| 49 | L636W (TTG→TGG) | bisC | biotin sulfoxide reductase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (25/22); total (27/22) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 |
AATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGA‑CCGCTCCGGCAAGAATTTGCCCGCGTGCGTTCCACAACCGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCAACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCATCTCAATTAACTGGTTGGCTTGCCAGAAC > NC_000913/3714259‑3714718
|
aaggCAAGTCCCGCCAGGTTAACTTCCCT‑GCCAAAGACCCGCTCCGGCAAGAATTTGCCCGCGTGCGTTCCACACCCGACCAGTATCGCCATCTTGTATGCCGCGCCCCTGGGAATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCCCCGCGTCCAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTCCCTGCCACTGtt < 2:197854/233‑1 (MQ=255)
aaTGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGA‑CCGCTCCGGCAAGAATTTGCCCGCGTGCGTTCCACAACCGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGtt < 1:518190/236‑1 (MQ=255)
aaTGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGA‑CCGCTCCGGCAAGAATTTGCCCGCGTGCGTTCCACAACCGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGACGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCCGACA‑GTACCTGCGAc > 2:449589/1‑232 (MQ=255)
tCGCTAATGA‑CCGCTCCGGCAAGAATTTGCCCGCGTGCGTTCCACAACCGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGACGGGCAGAAC‑GGACCTGCCCCTGGTCTGGGTCGGCATTTGCCTGGCAATCGt > 2:264143/1‑235 (MQ=255)
gCAAGAATTTGCCCGCGTGCGTTCCACAACCGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCGGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTgg < 2:181943/236‑1 (MQ=255)
aaCCGAAGTGTATCGTCATCTTGTATCCCGCGCTCCTGGGCATCGTCAGGATGAAGGGTGACAGGCTCACGTTTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTa < 1:86235/236‑1 (MQ=255)
ccGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGGCCCAGCCACATTGGATGCCCACGGCAATCCCGGTGACCGTaa > 2:86235/1‑235 (MQ=255)
aaCAGTATCGCCATCTTGTATGCCGCGCTCCTGGTCATCGTAAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCATGGCAATCCGGGTAACCGTACTCgg > 1:8715/1‑236 (MQ=255)
tCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGtt > 2:660967/1‑145 (MQ=255)
tCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGtt < 1:660967/145‑1 (MQ=255)
tCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGACCGGTGCCAGCCACATTGGATGCCCAGGGCAATCCGGGGAAACGTAATCGGCAATACGCtgtgg > 2:484804/1‑235 (MQ=255)
cgcgCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATAc < 1:82568/219‑1 (MQ=255)
cgcgCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATAc > 2:82568/1‑219 (MQ=255)
cgcTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGGATTGCCCTGCCATTCGTCTGGTTCCAGCCAAATTGGATGTCCAGGGCAATCTGGGTAAACGTAATCGGGAATATGATGTGATAAGATTTTAAt > 2:155477/1‑236 (MQ=255)
cgcTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCg < 1:140740/163‑1 (MQ=255)
cgcTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCg > 2:140740/1‑163 (MQ=255)
cgcTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAAt > 1:514624/1‑236 (MQ=255)
cGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCCATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCg > 1:172832/1‑236 (MQ=255)
cGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACAT‑‑‑‑TGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGgtt > 1:614996/1‑236 (MQ=255)
aaTGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCcac < 1:560309/151‑1 (MQ=255)
aaTGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCcac > 2:560309/1‑151 (MQ=255)
aaTGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCCATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTAACg > 1:129417/1‑236 (MQ=255)
tGGTGACAGGCTCACGATTGGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGa < 1:449589/236‑1 (MQ=255)
gggTGGCAGGCTAACGTTTTGCCACCGCGTACAATTCGCGAAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGa < 1:477976/235‑1 (MQ=255)
gACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTAACGGATtcg > 1:218507/1‑236 (MQ=255)
gACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTAACGGATgcg > 1:178569/1‑236 (MQ=255)
gACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCAACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGGAACCGTAATCGGCAATACGCTGTGAGACAAGTTTAATCCTGCCCCTGGCGGGTTTTAAAgggtatg > 2:507736/1‑231 (MQ=255)
aCAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGc > 1:29795/1‑160 (MQ=255)
aCGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGGTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAAGCTTGCCGCTGGCGGATTTTAACGGGTGCGCCAGCCGAt > 1:312352/1‑236 (MQ=255)
tGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTTAAGGATGCGCCAGCGGATCGCGGc > 1:428660/1‑236 (MQ=255)
cgTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAAt > 1:674025/1‑141 (MQ=255)
cgTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAAt < 2:674025/141‑1 (MQ=255)
aaaTCCGCGCAAAGAACTGTAATCCAGCTGGCTGTGCAGGCGGTCCGCCGGATGGGCAGAAA‑GTACCTGCCTCTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCagcga < 1:125619/235‑1 (MQ=255)
agaACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATAAGCGAAGC‑GAATaaaa > 1:678323/1‑234 (MQ=255)
tgtgCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTAACGGATACGCCACCGGATCACGGCGCAAATCAGCGAAGCGGAAAAAACCTCCCCCGGCCCGGGtttt > 2:193106/1‑235 (MQ=255)
tgCAGGGGGTGCCCCGGATGGGAAGAAA‑GCACCTGCCACTGTGCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACAT‑‑‑‑TGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCAt < 2:614996/235‑1 (MQ=255)
ggggcggcGCCCCGAATGGACAAAAT‑GCCCCTGCCACTTTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCa < 2:428660/234‑1 (MQ=255)
cggCGGGGCCCCGGGAGGGCAAAAAGGTCCCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCa < 2:678323/235‑1 (MQ=255)
gggggTGCGCCGGGTGGGCGGAAG‑GTCCCTGCCTCGGTGTTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCAt < 1:264143/232‑1 (MQ=255)
gCGGTGCGCCGGATGCGCAAAAT‑GCACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCAtc < 2:218507/235‑1 (MQ=255)
tccgcggaaggggAAGAAA‑TTCCCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCAtc < 1:645778/221‑1 (MQ=255)
gcgcCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCg > 2:251021/1‑143 (MQ=255)
gcgcCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCg < 1:251021/143‑1 (MQ=255)
gcgcCGGATGGGCAGAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGGTTTTAACGGATGCGCCAGCGGATCGCGGGAAAAAACAGCGAAGC‑GAATAAACCGCTCGCTGGTCGGGGGTTCCGGCAtctcca > 1:544154/1‑232 (MQ=255)
ttGGGCAGAAA‑GTCCCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCATCTCAATTAACTGGt < 1:606517/235‑1 (MQ=255)
gAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCa > 2:279354/1‑167 (MQ=255)
gAAA‑GTACCTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCa < 1:279354/167‑1 (MQ=255)
acactgtcccTGCCATTGTTCTGGTTCGGAATGGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCACAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCATCTCAATTAACTGGTTGGCt < 2:129417/227‑1 (MQ=255)
cTGCCACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCCAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGGCCGGGGTTTCCGGCAACTCCATTAACTGGTTGGCTTGCCCGAAc > 2:187412/1‑235 (MQ=255)
|
AATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGA‑CCGCTCCGGCAAGAATTTGCCCGCGTGCGTTCCACAACCGAACAGTATCGCCATCTTGTATGCCGCGCTCCTGGGCATCGTCAGGATGAATGGTGACAGGCTCACGATTTGCCACCGCGTACAATTCGCGCAGAGAACTGTAATTCAGCTGGCTGTGCAGGCGGTGCGCCGGATGGGCAGAAA‑GTACCTGCAACTGTTCTGGTTCGGCATTGCCCTGCCATTCGTCCGGCTCCAGCCACATTGGATGCCCAGGGCAATCCGGGTAACCGTAATCGGCAATACGCTGTGAGAAGATTTCAATCTTGCCGCTGGCGGTTTTTAACGGATGCGCCAGCGGATCGCGGCAAAAATCAGCGAAGC‑GAATAAACCGCTCGCTGTCCGGGTTTTCCGGCATCTCAATTAACTGGTTGGCTTGCCAGAAC > NC_000913/3714259‑3714718
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
