Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F433 I3 R1
|
16 |
161.1 |
8199666 |
93.6% |
7674887 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,809,761 |
G→T |
E49* (GAA→TAA) |
ygaZ → |
putative L‑valine exporter, norvaline resistance protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,809,761 | 0 | G | T | 98.0%
| 488.6
/ ‑0.8
| 147 | E49* (GAA→TAA) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base T (57/87); total (59/88) |
| Fisher's exact test for biased strand distribution p-value = 5.65e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 |
Only 100 of 155 total aligned reads displayed.
GAAGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCA > NC_000913/2809665‑2809856
|
gttggATGCAAAGACCGTTCCCCGATTGTGAGTAGTGATATGCCGGCGGCCTTTGCGTTCTGTCTGCATGCGACCCGTCTGGGATTCTCTCCTCTCTaa < 2:3621006/96‑1 (MQ=255)
gAAGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTaa < 2:1412082/99‑1 (MQ=255)
attgATGCAAACACAGTTTACCGATTTTTATTAGTTATATTCCGGTTTCCTTTGCGTTCGGTCTTAATGCGACCCGTCTGTGATTCTCTCCTCTCTaaa < 2:1625805/96‑1 (MQ=255)
aaGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTaaa < 2:1515388/99‑1 (MQ=255)
aaGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTaaa < 1:4074699/99‑1 (MQ=255)
aaGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTaaa > 1:1575079/1‑99 (MQ=255)
aaGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTaaa < 1:2425426/99‑1 (MQ=255)
aaGGATGCAAAGACAGTTTAACGATTGGTATTAGTTATACTCCGGTGGCCTTTGCGTTCGGACTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTaaa < 2:755295/99‑1 (MQ=255)
ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGc < 1:1415811/99‑1 (MQ=255)
tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGtt > 2:2108820/1‑99 (MQ=255)
gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGttt < 2:2521988/99‑1 (MQ=255)
gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGttt > 2:4022870/1‑99 (MQ=255)
gCAAAGACAGTTTACCGATTGTTAGTAGGTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGttt > 2:570306/1‑99 (MQ=255)
cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGtttt > 1:2229274/1‑99 (MQ=255)
aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGttttt < 1:1176506/99‑1 (MQ=255)
aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGttttttt > 2:3847193/1‑99 (MQ=255)
aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGttttttt < 1:2554194/99‑1 (MQ=255)
gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTtc < 1:632588/99‑1 (MQ=255)
gACAGTTTACCGATTGTTATTAGTTATACTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTtc < 1:3752804/99‑1 (MQ=255)
aCAGTTTACCGATTGTTATTAGTTATATTTCGGTGGCCTTTGCGTTCGGTCTGCATGCGACCCGTCTGGGATTATCTCCTCTCTAAAGCGGTTTTTtct > 2:702116/1‑99 (MQ=255)
aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTtct < 1:2206232/99‑1 (MQ=255)
cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTtctc < 1:2239298/99‑1 (MQ=255)
cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTtcgc < 1:1936345/99‑3 (MQ=255)
aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTcc < 1:955411/99‑1 (MQ=255)
gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCt > 2:147858/1‑99 (MQ=255)
gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTCGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCt < 1:835149/99‑1 (MQ=255)
ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGc < 2:2803603/99‑1 (MQ=255)
ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGc < 2:2196901/99‑1 (MQ=255)
aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGcat > 2:3419458/1‑99 (MQ=255)
cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGcatca > 2:3459173/1‑99 (MQ=255)
cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGcatca > 1:3175065/1‑99 (MQ=255)
cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGcatca > 1:565987/1‑99 (MQ=255)
cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGcatca > 1:3434553/1‑99 (MQ=255)
aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCttt < 1:3184457/99‑1 (MQ=255)
aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCAtt < 1:2589147/99‑1 (MQ=255)
aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCAtt < 1:1807552/99‑1 (MQ=255)
aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCAtt < 2:1553935/99‑1 (MQ=255)
atcttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCAttt < 1:1847731/96‑1 (MQ=255)
tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTa > 1:4066420/1‑99 (MQ=255)
gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTAt < 1:3101146/99‑1 (MQ=255)
gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTAt < 1:2034052/99‑1 (MQ=255)
ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATg < 1:411280/99‑1 (MQ=255)
tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGc < 2:2954911/99‑1 (MQ=255)
tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGc < 2:516172/99‑1 (MQ=255)
tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGc > 2:327235/1‑99 (MQ=255)
ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAg < 1:2368640/99‑1 (MQ=255)
ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATCTATGCAg > 2:2792432/1‑99 (MQ=255)
taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATAAATGATGCAgg < 1:159206/99‑1 (MQ=255)
aGTTATGTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGTTTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATTCTGgc < 2:3817961/99‑1 (MQ=255)
aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGgc < 2:2005796/99‑1 (MQ=255)
aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATAAATGATGCAgga < 2:2946567/99‑2 (MQ=255)
aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATAAATGATGCAgga < 1:589268/99‑2 (MQ=255)
gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATAAATGATGCAggag < 2:2043060/99‑3 (MQ=255)
gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATAAATGATGCAggag < 1:2990249/99‑3 (MQ=255)
ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGgcgc > 1:1665918/1‑99 (MQ=255)
tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGcgcg < 1:2206132/99‑1 (MQ=255)
atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGa < 1:2632242/99‑1 (MQ=255)
atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGa < 1:3292889/99‑1 (MQ=255)
atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGa > 1:1350789/1‑99 (MQ=255)
tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAg < 2:3991385/99‑1 (MQ=255)
tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAg < 2:2864130/99‑1 (MQ=255)
tCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCa > 1:417167/1‑99 (MQ=255)
tCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCa < 2:108246/99‑1 (MQ=255)
cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt > 1:3968917/1‑99 (MQ=255)
gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc > 2:2520129/1‑99 (MQ=255)
gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 1:1731238/99‑1 (MQ=255)
gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 1:816040/99‑1 (MQ=255)
tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 1:3424035/99‑1 (MQ=255)
ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt < 1:2898317/99‑1 (MQ=255)
gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCGCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 1:449695/99‑1 (MQ=255)
ccTTTGCGTTCGGTCTGAATGCGACACGTCTTGGATTCTCTCCTCCCTACAGCGTTTTTTTCTCTTGGATCATTTATGCAGGCGCGAGCAAGTTCGTCa > 2:63543/1‑99 (MQ=255)
cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:3170511/1‑99 (MQ=255)
cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:2879945/1‑99 (MQ=255)
cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:2447410/1‑99 (MQ=255)
cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt < 1:11605/99‑1 (MQ=255)
tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 2:123756/1‑99 (MQ=255)
tCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGa < 1:3013369/99‑1 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCCTTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 1:353086/1‑99 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 2:3765677/1‑99 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 2:4040655/1‑99 (MQ=255)
gAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:3530794/1‑99 (MQ=255)
gAATGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:3263453/1‑99 (MQ=255)
aaTGCGACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTTTCTTTTTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTCCCGCGCTGCTggta > 2:1860998/1‑97 (MQ=255)
gACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGTCGCGAGCCAGTTCGTCATTACCGCGCTGCTAGCAGCCgg > 2:3308967/1‑99 (MQ=255)
gACCCGTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg < 1:2079254/99‑1 (MQ=255)
gTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTTTTGCATTATTTATGCAAGCGCGAACCAGTTCTTCTTTACCACGATGCTAGGAGGCTGGagaa > 2:610452/1‑97 (MQ=255)
gTCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTGATTACGGCGATGCTGGCAGCCGGGagta > 1:3757103/1‑99 (MQ=255)
tCTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag > 1:697783/1‑99 (MQ=255)
cTGGGATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt < 2:1597896/99‑1 (MQ=255)
gggATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt < 1:4117854/99‑1 (MQ=255)
gggATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt < 1:849346/99‑1 (MQ=255)
gATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 1:459060/99‑1 (MQ=255)
gATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCAAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 1:3203876/99‑1 (MQ=255)
gATTCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTACGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 1:104079/99‑1 (MQ=255)
ttCTCTCCTCTCTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:1039226/99‑1 (MQ=255)
ctcctctcTAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg < 1:3411993/99‑1 (MQ=255)
ctctctAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:1238846/99‑1 (MQ=255)
ctctctAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 1:2666953/1‑99 (MQ=255)
ctctctAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:901338/99‑1 (MQ=255)
ctctAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 1:3807908/1‑99 (MQ=255)
|
GAAGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCA > NC_000913/2809665‑2809856
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
