Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,809,774 |
(T)7→6 |
coding (158/738 nt) |
ygaZ → |
putative L‑valine exporter, norvaline resistance protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,809,768 | 0 | T | . | 97.8%
| 405.5
/ 3.4
| 91 | coding (152/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base . (39/49); total (41/50) |
| Fisher's exact test for biased strand distribution p-value = 2.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.58e-01 |
TGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACC > NC_000913/2809671‑2809862
|
tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttt < 2:857343/100‑1 (MQ=255)
cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttt > 1:1515133/1‑100 (MQ=255)
cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttt > 1:261897/1‑100 (MQ=255)
aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGtttttt > 2:2275439/1‑100 (MQ=255)
aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttc < 1:1347518/100‑2 (MQ=255)
aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttc < 1:2374724/100‑2 (MQ=255)
aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttc > 1:2438720/1‑99 (MQ=255)
aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttct < 2:1340007/100‑3 (MQ=255)
aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGttttttct < 1:2334272/100‑3 (MQ=255)
cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCt > 2:2005181/1‑100 (MQ=255)
aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGTATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTg > 2:302018/1‑100 (MQ=255)
aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTg < 2:993087/100‑1 (MQ=255)
aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTg < 1:1891646/100‑1 (MQ=255)
gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGc > 1:1224902/1‑100 (MQ=255)
gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGc > 1:25814/1‑100 (MQ=255)
aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGcatca < 1:1344836/100‑1 (MQ=255)
cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCAtt > 1:1727430/1‑100 (MQ=255)
gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCAttt > 2:234053/1‑100 (MQ=255)
tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATg < 1:2168077/100‑1 (MQ=255)
gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc > 2:654371/1‑100 (MQ=255)
gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc < 2:1945807/100‑1 (MQ=255)
gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc > 2:1146485/1‑100 (MQ=255)
gTTATTAGTTATATTCCGGTGGCCTTTGCGTCCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGc < 1:2483447/100‑1 (MQ=255)
ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCa > 2:2072287/1‑100 (MQ=255)
ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCa > 2:2560175/1‑100 (MQ=255)
ttataaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGTCCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATAAATGATGCa < 2:2221922/100‑1 (MQ=255)
attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGATAGCG‑TTTTTTCTCCTGCATCATTTATGCAgg > 2:2032472/1‑100 (MQ=255)
attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAgg < 1:1051917/100‑1 (MQ=255)
attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAgg < 2:810175/100‑1 (MQ=255)
attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAgg > 2:2250433/1‑100 (MQ=255)
taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATAAATGATGCAggag < 2:1877894/100‑3 (MQ=255)
gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGcgcg > 1:686562/1‑100 (MQ=255)
gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGcgcg > 1:1109017/1‑100 (MQ=255)
tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAg > 2:776936/1‑100 (MQ=255)
tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:1965630/100‑1 (MQ=255)
tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCGCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:776680/100‑1 (MQ=255)
atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCCCGAGCCa > 2:1358288/1‑100 (MQ=255)
ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAg < 1:1465706/100‑1 (MQ=255)
ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAg < 2:2392952/100‑1 (MQ=255)
tCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt < 1:1198652/100‑1 (MQ=255)
ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt < 1:806804/100‑1 (MQ=255)
cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc > 1:2586241/1‑100 (MQ=255)
cGGTGGCCGTTGCGTTCGGTCAGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCACCATTTATGCAGGCGCGAGCCAGTTc > 2:1758293/1‑100 (MQ=255)
ggTGGCCGTTGCGGTCGGTCTGATGGCTACCCGGCTGGGGTTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:2108086/100‑1 (MQ=255)
ggTCGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTTCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:1064504/100‑1 (MQ=255)
gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt < 1:1074712/100‑1 (MQ=255)
ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTtcatca < 1:2032059/100‑1 (MQ=255)
ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:1673587/1‑100 (MQ=255)
ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:1872306/100‑1 (MQ=255)
ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:825553/100‑1 (MQ=255)
ggCCTTTGCGTTCGGTCTGAATGCGACCCGCCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:390348/100‑1 (MQ=255)
ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt < 1:1502159/100‑1 (MQ=255)
ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 1:338345/1‑100 (MQ=255)
cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTa > 1:1536895/1‑100 (MQ=255)
tGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 2:155013/1‑100 (MQ=255)
gCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc > 1:2616416/1‑100 (MQ=255)
gatcagTCTGAATGCGCCGCGTCTGGGATTATCTCCTCTCGAAAGC‑CTTTTGTCTCCTTCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGa < 2:2392731/95‑1 (MQ=255)
gTTCGGTCTGAATGTGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGa < 1:1939447/100‑1 (MQ=255)
gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGa > 1:816032/1‑100 (MQ=255)
ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGan < 1:163123/100‑2 (MQ=255)
ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 2:691998/1‑100 (MQ=255)
ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt < 1:840168/100‑1 (MQ=255)
ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt < 1:795150/100‑1 (MQ=255)
gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 2:522436/100‑1 (MQ=255)
gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 1:463555/100‑1 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTT‑TTTTTTTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTGCCGCGAGGCTgg > 2:696353/1‑100 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGCGCCAGTTCGTCATTACCGCGATGCTgg < 2:767719/100‑1 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:493298/100‑1 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:1353984/100‑1 (MQ=255)
tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:257199/100‑1 (MQ=255)
gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg > 2:1916744/1‑100 (MQ=255)
gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg > 2:2403628/1‑100 (MQ=255)
cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:41263/100‑1 (MQ=255)
cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:730598/100‑1 (MQ=255)
cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:1186909/100‑1 (MQ=255)
cccGTCTGGGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt > 2:967612/1‑100 (MQ=255)
cccGTCTGCGATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt > 2:2489891/1‑100 (MQ=255)
gggATTCTCTCCTCTCGAAAGCGTTTTTTT‑TTTTTTTTTTTTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGAAGCCGGGAGTAGTTtgt > 2:1764292/1‑100 (MQ=255)
ggATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg > 1:258974/1‑100 (MQ=255)
ggATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:2092015/100‑1 (MQ=255)
ggATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:1328227/100‑1 (MQ=255)
ggATTCTCTCCTCGCGAAAGCG‑TTTTTTCTCATGAATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1761787/100‑1 (MQ=255)
gATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 2:1906897/1‑100 (MQ=255)
gATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 2:148353/100‑1 (MQ=255)
gATTCTCTCCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 2:1906180/1‑100 (MQ=255)
tctctcCTCTCGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt < 1:1071302/100‑1 (MQ=255)
tctcctcccGAAAGCG‑TTTTTTCTCCTGCATCATGTATGCAGGCGCGAGCCACTTCGTCATTACCGCAATCCTCGCAGCCGGGCGTCGTATGCGCATtgc > 2:725408/1‑100 (MQ=255)
cctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 2:1483881/100‑1 (MQ=255)
cctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 1:1317913/1‑100 (MQ=255)
cctctcGAAAGCG‑ATTTTTCTCCTGTATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 2:2200128/100‑1 (MQ=255)
ctctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa < 1:381809/100‑1 (MQ=255)
tctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:1206860/100‑1 (MQ=255)
ctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 2:370753/1‑100 (MQ=255)
ctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 2:1720145/1‑100 (MQ=255)
ctcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 1:1786829/1‑100 (MQ=255)
tcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg < 2:1312797/100‑1 (MQ=255)
tcGAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg > 1:1103997/1‑100 (MQ=255)
gAAAGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 1:157307/100‑1 (MQ=255)
aaaGCG‑TTTTTTCTTTTGTTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAcc > 2:1101289/1‑100 (MQ=255)
aaaGCG‑TTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAcc < 1:961906/100‑1 (MQ=255)
|
TGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACC > NC_000913/2809671‑2809862
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
